FFCP PHASE1:Mm9::chr9:91259711..91259725,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=671 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:91259711..91259725,- | |||
|description=CAGE_peak_at_chr9:91259711..91259725,- | |description=CAGE_peak_at_chr9:91259711..91259725,- | ||
|id=chr9:91259711..91259725,- | |id=chr9:91259711..91259725,- | ||
|ontology_enrichment_celltype=CL:0000117!7.40e-17!23;CL:0000337!7.40e-17!23;CL:0002319!4.33e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000055!9.08e-13!50;CL:0000540!3.83e-10!33;CL:0000047!3.83e-10!33;CL:0000031!3.83e-10!33;CL:0000404!3.83e-10!33;CL:0002453!8.61e-10!8;CL:0000393!8.01e-08!39;CL:0000211!8.01e-08!39;CL:0000333!1.65e-07!10;CL:0000095!1.65e-07!10;CL:0000243!1.65e-07!10;CL:0000123!1.65e-07!10;CL:0000125!1.65e-07!10;CL:0000030!1.65e-07!10;CL:0000339!1.65e-07!10;CL:0002321!4.24e-07!70;CL:0000220!4.24e-07!70;CL:0000128!5.15e-07!6;CL:0000126!5.15e-07!6;CL:0000127!5.15e-07!6 | |ontology_enrichment_celltype=CL:0000117!7.40e-17!23;CL:0000337!7.40e-17!23;CL:0002319!4.33e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000055!9.08e-13!50;CL:0000540!3.83e-10!33;CL:0000047!3.83e-10!33;CL:0000031!3.83e-10!33;CL:0000404!3.83e-10!33;CL:0002453!8.61e-10!8;CL:0000393!8.01e-08!39;CL:0000211!8.01e-08!39;CL:0000333!1.65e-07!10;CL:0000095!1.65e-07!10;CL:0000243!1.65e-07!10;CL:0000123!1.65e-07!10;CL:0000125!1.65e-07!10;CL:0000030!1.65e-07!10;CL:0000339!1.65e-07!10;CL:0002321!4.24e-07!70;CL:0000220!4.24e-07!70;CL:0000128!5.15e-07!6;CL:0000126!5.15e-07!6;CL:0000127!5.15e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.10e-24,8;CL:0002319,1.70e-23,43;CL:0000221,6.34e-23,44;CL:0000133,6.34e-23,44;CL:0000333,1.07e-19,10;CL:0000095,1.07e-19,10;CL:0000243,1.07e-19,10;CL:0000123,1.07e-19,10;CL:0000125,1.07e-19,10;CL:0000030,1.07e-19,10;CL:0000339,1.07e-19,10;CL:0002613,4.88e-18,3;CL:0000128,3.96e-15,6;CL:0000126,3.96e-15,6;CL:0000127,3.96e-15,6;CL:0000117,1.63e-14,23;CL:0000337,1.63e-14,23;CL:0002321,9.16e-14,70;CL:0000708,2.30e-12,2;CL:0000878,4.37e-12,2;CL:0000129,4.37e-12,2;CL:0000540,7.41e-10,33;CL:0000047,7.41e-10,33;CL:0000031,7.41e-10,33;CL:0000404,7.41e-10,33;CL:0000151,1.55e-08,3;CL:0000499,1.55e-08,3;CL:0000327,1.55e-08,3;CL:0002612,2.37e-08,3;CL:0000393,3.33e-08,39;CL:0000211,3.33e-08,39;CL:0000120,7.57e-08,3;CL:0000723,3.40e-07,91;CL:0000048,3.40e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.03e-21!73;UBERON:0005743!7.03e-21!73;UBERON:0000073!5.15e-20!75;UBERON:0001016!5.15e-20!75;UBERON:0004121!2.35e-18!102;UBERON:0000924!2.35e-18!102;UBERON:0006601!2.35e-18!102;UBERON:0000033!2.80e-16!63;UBERON:0002346!5.31e-16!71;UBERON:0003075!5.31e-16!71;UBERON:0007284!5.31e-16!71;UBERON:0001049!1.48e-15!52;UBERON:0005068!1.48e-15!52;UBERON:0006241!1.48e-15!52;UBERON:0007135!1.48e-15!52;UBERON:0002616!6.92e-14!49;UBERON:0000955!1.87e-13!50;UBERON:0006238!1.87e-13!50;UBERON:0003056!1.13e-11!49;UBERON:0003076!6.40e-11!12;UBERON:0003057!6.40e-11!12;UBERON:0007811!1.88e-09!86;UBERON:0002020!2.32e-08!34;UBERON:0000153!6.57e-08!94;UBERON:0001948!7.05e-08!5;UBERON:0002315!7.05e-08!5;UBERON:0003080!1.10e-07!40;UBERON:0002780!4.03e-07!39;UBERON:0001890!4.03e-07!39;UBERON:0006240!4.03e-07!39 | |ontology_enrichment_uberon=UBERON:0001017!7.03e-21!73;UBERON:0005743!7.03e-21!73;UBERON:0000073!5.15e-20!75;UBERON:0001016!5.15e-20!75;UBERON:0004121!2.35e-18!102;UBERON:0000924!2.35e-18!102;UBERON:0006601!2.35e-18!102;UBERON:0000033!2.80e-16!63;UBERON:0002346!5.31e-16!71;UBERON:0003075!5.31e-16!71;UBERON:0007284!5.31e-16!71;UBERON:0001049!1.48e-15!52;UBERON:0005068!1.48e-15!52;UBERON:0006241!1.48e-15!52;UBERON:0007135!1.48e-15!52;UBERON:0002616!6.92e-14!49;UBERON:0000955!1.87e-13!50;UBERON:0006238!1.87e-13!50;UBERON:0003056!1.13e-11!49;UBERON:0003076!6.40e-11!12;UBERON:0003057!6.40e-11!12;UBERON:0007811!1.88e-09!86;UBERON:0002020!2.32e-08!34;UBERON:0000153!6.57e-08!94;UBERON:0001948!7.05e-08!5;UBERON:0002315!7.05e-08!5;UBERON:0003080!1.10e-07!40;UBERON:0002780!4.03e-07!39;UBERON:0001890!4.03e-07!39;UBERON:0006240!4.03e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.00e-13,73;UBERON:0001016,1.00e-12,75;UBERON:0003210,2.30e-12,2;UBERON:0000369,4.75e-11,5;UBERON:0002435,4.75e-11,5;UBERON:0000204,4.75e-11,5;UBERON:0010082,4.75e-11,5;UBERON:0004121,1.18e-09,95;UBERON:0000924,1.18e-09,95;UBERON:0006601,1.18e-09,95;UBERON:0002257,2.37e-08,3;UBERON:0002420,4.39e-07,8;UBERON:0007245,4.39e-07,8;UBERON:0010009,4.39e-07,8;UBERON:0010011,4.39e-07,8;UBERON:0000454,4.39e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.878744730937887,1.36100929351998,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,2.71075625655306,1.77858959222228,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,3.95658863190582,3.93396867490361,1.56274011167028,0,0,0,1.17851434189467,0.854230084794618,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.857348140126369,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.726511433089237,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0.365855945745545,0,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.878744730937887,1.36100929351998,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,2.71075625655306,1.77858959222228,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,3.95658863190582,3.93396867490361,1.56274011167028,0,0,0,1.17851434189467,0.854230084794618,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.857348140126369,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.726511433089237,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0.365855945745545,0,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr9:91259711..91259725,- | |short_description=p@chr9:91259711..91259725,- | ||
}} | }} |
Latest revision as of 18:38, 5 August 2015
Short description: | p@chr9:91259711..91259725, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:91259711..91259725, - |
Coexpression cluster: | MCL_coexpression_mm9:671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.00e-13 | 73 |
nervous system | 1.00e-12 | 75 |
blood-cerebrospinal fluid barrier | 2.30e-12 | 2 |
corpus striatum | 4.75e-11 | 5 |
striatum | 4.75e-11 | 5 |
ventral part of telencephalon | 4.75e-11 | 5 |
future corpus striatum | 4.75e-11 | 5 |
ectoderm-derived structure | 1.18e-09 | 95 |
ectoderm | 1.18e-09 | 95 |
presumptive ectoderm | 1.18e-09 | 95 |
ventral horn of spinal cord | 2.37e-08 | 3 |
basal ganglion | 4.39e-07 | 8 |
nuclear complex of neuraxis | 4.39e-07 | 8 |
aggregate regional part of brain | 4.39e-07 | 8 |
collection of basal ganglia | 4.39e-07 | 8 |
cerebral subcortex | 4.39e-07 | 8 |