FFCP PHASE1:Hg19::chr12:113335975..113335993,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113335975..113335993,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr12:113335975..113335993,+ | |description=CAGE_peak_at_chr12:113335975..113335993,+ | ||
|id=chr12:113335975..113335993,+ | |id=chr12:113335975..113335993,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.68e-17!42;CL:0000860!1.21e-15!45;CL:0002194!8.23e-10!63;CL:0000576!8.23e-10!63;CL:0000040!8.23e-10!63;CL:0000559!8.23e-10!63;CL:0000766!9.82e-10!76;CL:0002009!2.14e-09!65;CL:0000839!1.81e-08!70;CL:0000557!2.68e-08!71 | |ontology_enrichment_celltype=CL:0002057!4.68e-17!42;CL:0000860!1.21e-15!45;CL:0002194!8.23e-10!63;CL:0000576!8.23e-10!63;CL:0000040!8.23e-10!63;CL:0000559!8.23e-10!63;CL:0000766!9.82e-10!76;CL:0002009!2.14e-09!65;CL:0000839!1.81e-08!70;CL:0000557!2.68e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;8.25e-11;10!UBERON:0006601;1.29e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.71e-48!20;UBERON:0001049!1.36e-46!57;UBERON:0005068!1.36e-46!57;UBERON:0006241!1.36e-46!57;UBERON:0007135!1.36e-46!57;UBERON:0001893!8.68e-45!34;UBERON:0002619!1.17e-43!22;UBERON:0002780!4.06e-43!41;UBERON:0001890!4.06e-43!41;UBERON:0006240!4.06e-43!41;UBERON:0000955!1.88e-42!69;UBERON:0006238!1.88e-42!69;UBERON:0002791!5.40e-42!33;UBERON:0001017!5.72e-42!82;UBERON:0003080!5.94e-42!42;UBERON:0002616!1.13e-41!59;UBERON:0002020!9.11e-41!34;UBERON:0003528!9.11e-41!34;UBERON:0001869!3.65e-40!32;UBERON:0005743!1.26e-39!86;UBERON:0000956!4.77e-38!25;UBERON:0000203!4.77e-38!25;UBERON:0000073!4.63e-35!94;UBERON:0001016!4.63e-35!94;UBERON:0003075!2.90e-28!86;UBERON:0007284!2.90e-28!86;UBERON:0003056!5.52e-27!61;UBERON:0002346!1.17e-26!90;UBERON:0007023!6.61e-23!115;UBERON:0000033!6.26e-22!123;UBERON:0000153!1.61e-20!129;UBERON:0007811!1.61e-20!129;UBERON:0000200!1.89e-20!6;UBERON:0001871!9.35e-20!7;UBERON:0004121!1.05e-15!169;UBERON:0000924!3.82e-15!173;UBERON:0006601!3.82e-15!173;UBERON:0002021!1.66e-11!5;UBERON:0001872!3.36e-11!5;UBERON:0002771!6.77e-11!3;UBERON:0002420!8.72e-09!9;UBERON:0007245!8.72e-09!9;UBERON:0010009!8.72e-09!9;UBERON:0010011!8.72e-09!9;UBERON:0000454!8.72e-09!9;UBERON:0000025!2.71e-08!194;UBERON:0001870!5.59e-08!2;UBERON:0001876!1.20e-07!2;UBERON:0000062!2.95e-07!511;UBERON:0002390!4.01e-07!102;UBERON:0003061!4.01e-07!102;UBERON:0003076!5.67e-07!15;UBERON:0003057!5.67e-07!15;UBERON:0002371!5.74e-07!80 | |ontology_enrichment_uberon=UBERON:0001950!2.71e-48!20;UBERON:0001049!1.36e-46!57;UBERON:0005068!1.36e-46!57;UBERON:0006241!1.36e-46!57;UBERON:0007135!1.36e-46!57;UBERON:0001893!8.68e-45!34;UBERON:0002619!1.17e-43!22;UBERON:0002780!4.06e-43!41;UBERON:0001890!4.06e-43!41;UBERON:0006240!4.06e-43!41;UBERON:0000955!1.88e-42!69;UBERON:0006238!1.88e-42!69;UBERON:0002791!5.40e-42!33;UBERON:0001017!5.72e-42!82;UBERON:0003080!5.94e-42!42;UBERON:0002616!1.13e-41!59;UBERON:0002020!9.11e-41!34;UBERON:0003528!9.11e-41!34;UBERON:0001869!3.65e-40!32;UBERON:0005743!1.26e-39!86;UBERON:0000956!4.77e-38!25;UBERON:0000203!4.77e-38!25;UBERON:0000073!4.63e-35!94;UBERON:0001016!4.63e-35!94;UBERON:0003075!2.90e-28!86;UBERON:0007284!2.90e-28!86;UBERON:0003056!5.52e-27!61;UBERON:0002346!1.17e-26!90;UBERON:0007023!6.61e-23!115;UBERON:0000033!6.26e-22!123;UBERON:0000153!1.61e-20!129;UBERON:0007811!1.61e-20!129;UBERON:0000200!1.89e-20!6;UBERON:0001871!9.35e-20!7;UBERON:0004121!1.05e-15!169;UBERON:0000924!3.82e-15!173;UBERON:0006601!3.82e-15!173;UBERON:0002021!1.66e-11!5;UBERON:0001872!3.36e-11!5;UBERON:0002771!6.77e-11!3;UBERON:0002420!8.72e-09!9;UBERON:0007245!8.72e-09!9;UBERON:0010009!8.72e-09!9;UBERON:0010011!8.72e-09!9;UBERON:0000454!8.72e-09!9;UBERON:0000025!2.71e-08!194;UBERON:0001870!5.59e-08!2;UBERON:0001876!1.20e-07!2;UBERON:0000062!2.95e-07!511;UBERON:0002390!4.01e-07!102;UBERON:0003061!4.01e-07!102;UBERON:0003076!5.67e-07!15;UBERON:0003057!5.67e-07!15;UBERON:0002371!5.74e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.50e-47;20!UBERON:0002619;7.84e-43;22!UBERON:0000956;8.49e-38;25!UBERON:0000203;8.49e-38;25!UBERON:0001869;4.43e-35;32!UBERON:0001893;1.23e-33;34!UBERON:0000200;2.22e-33;6!UBERON:0002791;7.52e-27;32!UBERON:0003528;6.11e-25;34!UBERON:0002020;6.11e-25;34!UBERON:0002021;2.87e-23;5!UBERON:0000955;2.08e-18;68!UBERON:0002780;3.58e-18;41!UBERON:0001890;3.58e-18;41!UBERON:0001871;1.09e-16;6!UBERON:0001017;3.45e-16;75!UBERON:0002581;1.10e-13;1!UBERON:0002902;1.10e-13;1!UBERON:0003112;1.10e-13;1!UBERON:0011158;1.10e-13;1!UBERON:0009899;1.10e-13;1!UBERON:0007190;1.10e-13;1!UBERON:0003128;1.10e-13;1!UBERON:0001703;1.10e-13;1!UBERON:0002241;1.10e-13;1!UBERON:0001872;5.70e-11;5!UBERON:0000073;6.24e-11;53!UBERON:0002616;6.24e-11;53!UBERON:0001016;2.19e-10;83!UBERON:0002771;9.24e-08;2!UBERON:0001876;1.75e-07;2!UBERON:0002702;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.96e-47,20;UBERON:0002619,7.13e-43,22;UBERON:0000956,7.81e-38,25;UBERON:0000203,7.81e-38,25;UBERON:0001869,1.50e-36,32;UBERON:0001893,2.10e-34,34;UBERON:0000200,1.73e-33,6;UBERON:0002791,1.25e-29,32;UBERON:0000955,1.57e-28,68;UBERON:0006238,1.57e-28,68;UBERON:0002780,1.70e-28,41;UBERON:0001890,1.70e-28,41;UBERON:0003080,1.70e-28,41;UBERON:0006240,1.70e-28,41;UBERON:0003528,6.91e-28,34;UBERON:0002020,6.91e-28,34;UBERON:0001017,9.93e-28,81;UBERON:0001016,7.28e-25,89;UBERON:0002021,3.47e-23,5;UBERON:0000073,6.35e-22,53;UBERON:0002616,6.35e-22,53;UBERON:0001049,1.04e-20,56;UBERON:0005068,1.04e-20,56;UBERON:0006241,1.04e-20,56;UBERON:0007135,1.04e-20,56;UBERON:0003056,5.98e-19,61;UBERON:0007023,6.45e-17,114;UBERON:0001871,9.33e-17,6;UBERON:0003075,7.35e-14,82;UBERON:0007284,7.35e-14,82;UBERON:0003112,7.55e-14,1;UBERON:0011158,7.55e-14,1;UBERON:0003128,7.55e-14,1;UBERON:0001703,7.55e-14,1;UBERON:0002241,7.55e-14,1;UBERON:0004761,7.55e-14,1;UBERON:0009617,7.55e-14,1;UBERON:0007190,9.73e-14,1;UBERON:0002581,1.10e-13,1;UBERON:0002902,1.61e-13,1;UBERON:0009899,1.61e-13,1;UBERON:0002346,3.62e-13,86;UBERON:0004121,2.33e-12,171;UBERON:0000924,2.33e-12,171;UBERON:0006601,2.33e-12,171;UBERON:0001872,5.85e-11,5;UBERON:0010371,1.06e-10,104;UBERON:0011216,1.31e-10,223;UBERON:0010314,5.33e-10,132;UBERON:0002771,9.25e-08,2;UBERON:0001876,1.36e-07,2;UBERON:0005253,1.45e-07,2;UBERON:0002702,1.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.997318288108159,0,0,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.663475559587348,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,9.15196986764724,0.500763722825999,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,4.25089728976755,0.638535436228605,2.46139637088906,0,1.31398779682014,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,2.34323429584154,0,0.634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,1.71009211263408,0,0,0,0.628462359664008,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.997318288108159,0,0,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.663475559587348,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,9.15196986764724,0.500763722825999,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,4.25089728976755,0.638535436228605,2.46139637088906,0,1.31398779682014,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,2.34323429584154,0,0.634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,1.71009211263408,0,0,0,0.628462359664008,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:113335975..113335993,+ | |short_description=p@chr12:113335975..113335993,+ | ||
}} | }} |
Latest revision as of 05:08, 24 July 2015
Short description: | p@chr12:113335975..113335993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113335975..113335993, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data