FFCP PHASE1:Hg19::chr17:27441247..27441267,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399687 | |EntrezGene=399687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31104 | |HGNC=31104 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000533399_5end | |association_with_transcript=18bp_to_ENST00000533399_5end | ||
|cluster_id=chr17:27441247..27441267,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_11_at_MYO18A_5end | |description=CAGE_peak_11_at_MYO18A_5end | ||
|id=chr17:27441247..27441267,- | |id=chr17:27441247..27441267,- | ||
|ontology_enrichment_celltype=CL:0002194!9.36e-44!63;CL:0000576!9.36e-44!63;CL:0000040!9.36e-44!63;CL:0000559!9.36e-44!63;CL:0002009!3.45e-42!65;CL:0000839!1.16e-38!70;CL:0000557!5.16e-38!71;CL:0000766!4.94e-35!76;CL:0002057!1.67e-29!42;CL:0000860!3.48e-27!45;CL:0000763!2.17e-21!112;CL:0000049!2.17e-21!112;CL:0002087!1.08e-19!119;CL:0002031!1.33e-18!124;CL:0000738!1.24e-15!140;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0002619!2.28e-11!3;CL:0000988!2.31e-10!182 | |ontology_enrichment_celltype=CL:0002194!9.36e-44!63;CL:0000576!9.36e-44!63;CL:0000040!9.36e-44!63;CL:0000559!9.36e-44!63;CL:0002009!3.45e-42!65;CL:0000839!1.16e-38!70;CL:0000557!5.16e-38!71;CL:0000766!4.94e-35!76;CL:0002057!1.67e-29!42;CL:0000860!3.48e-27!45;CL:0000763!2.17e-21!112;CL:0000049!2.17e-21!112;CL:0002087!1.08e-19!119;CL:0002031!1.33e-18!124;CL:0000738!1.24e-15!140;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0002619!2.28e-11!3;CL:0000988!2.31e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000840;4.10e-28;5!CL:0000990;5.33e-19;8!CL:0000451;1.13e-15;10!CL:0002619;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.10e-28,5;CL:0001029,4.10e-28,5;CL:0000990,5.33e-19,8;CL:0002194,8.89e-19,59;CL:0000576,8.89e-19,59;CL:0000040,8.89e-19,59;CL:0000559,8.89e-19,59;CL:0002009,3.69e-18,61;CL:0000839,8.94e-17,66;CL:0000557,1.60e-16,67;CL:0000451,1.13e-15,10;CL:0000766,2.31e-15,72;CL:0000763,3.93e-10,108;CL:0000049,3.93e-10,108;CL:0002087,1.73e-09,115;CL:0002031,4.48e-09,120;CL:0000738,5.98e-08,136;CL:0002619,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.89e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p11@MYO18A | |short_description=p11@MYO18A | ||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p11@MYO18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MYO18A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 18bp_to_ENST00000533399_5end |
EntrezGene: | MYO18A |
HGNC: | 31104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.10e-28 | 5 |
common dendritic progenitor | 4.10e-28 | 5 |
conventional dendritic cell | 5.33e-19 | 8 |
monopoietic cell | 8.89e-19 | 59 |
monocyte | 8.89e-19 | 59 |
monoblast | 8.89e-19 | 59 |
promonocyte | 8.89e-19 | 59 |
macrophage dendritic cell progenitor | 3.69e-18 | 61 |
myeloid lineage restricted progenitor cell | 8.94e-17 | 66 |
granulocyte monocyte progenitor cell | 1.60e-16 | 67 |
dendritic cell | 1.13e-15 | 10 |
myeloid leukocyte | 2.31e-15 | 72 |
myeloid cell | 3.93e-10 | 108 |
common myeloid progenitor | 3.93e-10 | 108 |
nongranular leukocyte | 1.73e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.48e-09 | 120 |
leukocyte | 5.98e-08 | 136 |
adult endothelial progenitor cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.02e-41 | 4 |
striatum | 5.02e-41 | 4 |
ventral part of telencephalon | 5.02e-41 | 4 |
future corpus striatum | 5.02e-41 | 4 |
caudate-putamen | 3.82e-25 | 3 |
dorsal striatum | 3.82e-25 | 3 |
telencephalic nucleus | 8.36e-24 | 7 |
putamen | 1.88e-19 | 1 |
nucleus accumbens | 3.91e-19 | 1 |
ventral striatum | 3.91e-19 | 1 |
basal ganglion | 1.10e-18 | 9 |
neural nucleus | 1.10e-18 | 9 |
nuclear complex of neuraxis | 1.10e-18 | 9 |
nucleus of brain | 1.10e-18 | 9 |
aggregate regional part of brain | 1.10e-18 | 9 |
collection of basal ganglia | 1.10e-18 | 9 |
cerebral subcortex | 1.10e-18 | 9 |
bone marrow | 1.53e-14 | 76 |
bone element | 1.85e-13 | 82 |
skeletal element | 3.10e-12 | 90 |
immune system | 7.89e-12 | 93 |
hematopoietic system | 3.31e-11 | 98 |
blood island | 3.31e-11 | 98 |
skeletal system | 5.64e-11 | 100 |
caudate nucleus | 1.89e-10 | 2 |
future caudate nucleus | 1.89e-10 | 2 |
hemolymphoid system | 3.93e-10 | 108 |