FFCP PHASE1:Hg19::chr12:104350898..104351001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728568 | |EntrezGene=728568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34450 | |HGNC=34450 | ||
|TSSclassifier=strong | |||
|UniProt=F8VS87,G3V1W1,F8VXG8,Q69YU5 | |UniProt=F8VS87,G3V1W1,F8VXG8,Q69YU5 | ||
|association_with_transcript=0bp_to_ENST00000546540,ENST00000546819,ENST00000547975,ENST00000549478,ENST00000549960,ENST00000552940,NM_001135570,uc001tkd.3,uc009zuj.2_5end | |association_with_transcript=0bp_to_ENST00000546540,ENST00000546819,ENST00000547975,ENST00000549478,ENST00000549960,ENST00000552940,NM_001135570,uc001tkd.3,uc009zuj.2_5end | ||
|cluster_id=chr12:104350898..104351001,- | |||
|description=CAGE_peak_1_at_C12orf73_5end | |description=CAGE_peak_1_at_C12orf73_5end | ||
|id=chr12:104350898..104351001,- | |id=chr12:104350898..104351001,- | ||
|ontology_enrichment_celltype=CL:0000066!5.90e-16!254 | |ontology_enrichment_celltype=CL:0000066!5.90e-16!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.60e-16,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.29e-32!235;DOID:14566!1.74e-31!239;DOID:0050687!4.06e-20!143;DOID:305!2.07e-18!106;DOID:0050686!4.79e-18!137;DOID:2531!6.78e-11!51;DOID:0060083!6.78e-11!51;DOID:1240!1.46e-08!39 | |ontology_enrichment_disease=DOID:162!3.29e-32!235;DOID:14566!1.74e-31!239;DOID:0050687!4.06e-20!143;DOID:305!2.07e-18!106;DOID:0050686!4.79e-18!137;DOID:2531!6.78e-11!51;DOID:0060083!6.78e-11!51;DOID:1240!1.46e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.23e-07;51!DOID:0060083;1.23e-07;51!DOID:1240;2.51e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.29e-32,235;DOID:14566,1.74e-31,239;DOID:0050687,4.05e-20,143;DOID:305,2.07e-18,106;DOID:0050686,4.79e-18,137;DOID:2531,6.78e-11,51;DOID:0060083,6.78e-11,51;DOID:1240,1.46e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.94e-18!94;UBERON:0001016!3.94e-18!94;UBERON:0005743!9.16e-16!86;UBERON:0001017!1.36e-14!82;UBERON:0000924!1.12e-12!173;UBERON:0006601!1.12e-12!173;UBERON:0002346!1.99e-12!90;UBERON:0004121!7.14e-12!169;UBERON:0003075!1.51e-11!86;UBERON:0007284!1.51e-11!86;UBERON:0000955!1.73e-11!69;UBERON:0006238!1.73e-11!69;UBERON:0001049!1.89e-11!57;UBERON:0005068!1.89e-11!57;UBERON:0006241!1.89e-11!57;UBERON:0007135!1.89e-11!57;UBERON:0003056!3.35e-10!61;UBERON:0000153!1.02e-09!129;UBERON:0007811!1.02e-09!129;UBERON:0002616!2.37e-09!59;UBERON:0000033!2.58e-09!123;UBERON:0002780!4.32e-09!41;UBERON:0001890!4.32e-09!41;UBERON:0006240!4.32e-09!41;UBERON:0003080!1.28e-08!42;UBERON:0002020!1.30e-07!34;UBERON:0003528!1.30e-07!34;UBERON:0001869!3.01e-07!32;UBERON:0001893!3.25e-07!34;UBERON:0000063!3.30e-07!97;UBERON:0002791!4.29e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;6.61e-07;83!UBERON:0003528;7.71e-07;34!UBERON:0002020;7.71e-07;34!UBERON:0000073;8.57e-07;53!UBERON:0002616;8.57e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.19e-17,89;UBERON:0001017,4.90e-15,81;UBERON:0002346,5.08e-13,86;UBERON:0003075,4.01e-12,82;UBERON:0007284,4.01e-12,82;UBERON:0004121,4.65e-12,171;UBERON:0000924,4.65e-12,171;UBERON:0006601,4.65e-12,171;UBERON:0001049,6.30e-12,56;UBERON:0005068,6.30e-12,56;UBERON:0006241,6.30e-12,56;UBERON:0007135,6.30e-12,56;UBERON:0000955,6.65e-12,68;UBERON:0006238,6.65e-12,68;UBERON:0011216,6.92e-12,223;UBERON:0000073,5.18e-11,53;UBERON:0002616,5.18e-11,53;UBERON:0003056,5.51e-11,61;UBERON:0010371,1.32e-09,104;UBERON:0002780,4.32e-09,41;UBERON:0001890,4.32e-09,41;UBERON:0003080,4.32e-09,41;UBERON:0006240,4.32e-09,41;UBERON:0003528,1.30e-07,34;UBERON:0002020,1.30e-07,34;UBERON:0001869,3.01e-07,32;UBERON:0001893,3.25e-07,34;UBERON:0002791,4.13e-07,32 | |||
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| ||
|short_description=p1@C12orf73 | |short_description=p1@C12orf73 | ||
}} | }} |
Latest revision as of 23:20, 15 September 2015
Short description: | p1@C12orf73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf73_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546540, ENST00000546819, ENST00000547975, ENST00000549478, ENST00000549960, ENST00000552940, NM_001135570, uc001tkd.3, uc009zuj.2_5end |
EntrezGene: | C12orf73 |
HGNC: | 34450 |
UniProt: | F8VS87G3V1W1F8VXG8Q69YU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.60e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.19e-17 | 89 |
central nervous system | 4.90e-15 | 81 |
neurectoderm | 5.08e-13 | 86 |
neural plate | 4.01e-12 | 82 |
presumptive neural plate | 4.01e-12 | 82 |
ectoderm-derived structure | 4.65e-12 | 171 |
ectoderm | 4.65e-12 | 171 |
presumptive ectoderm | 4.65e-12 | 171 |
neural tube | 6.30e-12 | 56 |
neural rod | 6.30e-12 | 56 |
future spinal cord | 6.30e-12 | 56 |
neural keel | 6.30e-12 | 56 |
brain | 6.65e-12 | 68 |
future brain | 6.65e-12 | 68 |
organ system subdivision | 6.92e-12 | 223 |
regional part of nervous system | 5.18e-11 | 53 |
regional part of brain | 5.18e-11 | 53 |
pre-chordal neural plate | 5.51e-11 | 61 |
ecto-epithelium | 1.32e-09 | 104 |
regional part of forebrain | 4.32e-09 | 41 |
forebrain | 4.32e-09 | 41 |
anterior neural tube | 4.32e-09 | 41 |
future forebrain | 4.32e-09 | 41 |
brain grey matter | 1.30e-07 | 34 |
gray matter | 1.30e-07 | 34 |
cerebral hemisphere | 3.01e-07 | 32 |
telencephalon | 3.25e-07 | 34 |
regional part of telencephalon | 4.13e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.29e-32 | 235 |
disease of cellular proliferation | 1.74e-31 | 239 |
cell type cancer | 4.05e-20 | 143 |
carcinoma | 2.07e-18 | 106 |
organ system cancer | 4.79e-18 | 137 |
hematologic cancer | 6.78e-11 | 51 |
immune system cancer | 6.78e-11 | 51 |
leukemia | 1.46e-08 | 39 |