FFCP PHASE1:Hg19::chr10:63661004..63661019,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:63661004..63661019,+
|short_description=p15@ARID5B
|description=CAGE_peak_15_at_ARID5B_5end
|association_with_transcript=0bp_to_NM_032199_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84159 | |EntrezGene=84159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17362 | |HGNC=17362 | ||
|TSSclassifier=strong | |||
|UniProt=Q14865 | |UniProt=Q14865 | ||
|association_with_transcript=0bp_to_NM_032199_5end | |||
|cluster_id=chr10:63661004..63661019,+ | |||
|description=CAGE_peak_15_at_ARID5B_5end | |||
|id=chr10:63661004..63661019,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.41e-20!45;CL:0002057!1.10e-19!42;CL:0002194!2.56e-14!63;CL:0000576!2.56e-14!63;CL:0000040!2.56e-14!63;CL:0000559!2.56e-14!63;CL:0002087!7.73e-14!119;CL:0002009!2.46e-13!65;CL:0000557!4.48e-13!71;CL:0000839!1.52e-12!70;CL:0000766!8.60e-12!76;CL:0002031!1.92e-11!124;CL:0000738!2.31e-11!140;CL:0000037!1.98e-07!172;CL:0000566!1.98e-07!172;CL:0002032!8.18e-07!165;CL:0000837!8.18e-07!165;CL:0000988!8.72e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.19e-32;33!CL:0002057;4.19e-32;33!CL:0000473;6.53e-24;39!CL:0000234;6.53e-24;39!CL:0000576;4.81e-18;48!CL:0000766;1.46e-10;69!CL:0002087;7.26e-09;104!CL:0000236;1.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.64e-36,42;CL:0002057,5.64e-36,42;CL:0000473,1.57e-33,48;CL:0000234,1.57e-33,48;CL:0002194,2.06e-25,59;CL:0000576,2.06e-25,59;CL:0000040,2.06e-25,59;CL:0000559,2.06e-25,59;CL:0002009,2.28e-24,61;CL:0000557,1.61e-23,67;CL:0000839,4.94e-22,66;CL:0000766,1.17e-19,72;CL:0002087,2.28e-18,115;CL:0002031,2.93e-17,120;CL:0000738,1.95e-15,136;CL:0000763,3.50e-13,108;CL:0000049,3.50e-13,108;CL:0000037,9.78e-13,168;CL:0002032,1.21e-12,161;CL:0000837,1.21e-12,161;CL:0000988,1.19e-11,177;CL:0000236,4.16e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!4.26e-15!22;UBERON:0004765!1.53e-14!101;UBERON:0001434!1.53e-14!101;UBERON:0001950!5.37e-14!20;UBERON:0000956!6.17e-14!25;UBERON:0000203!6.17e-14!25;UBERON:0001869!8.02e-14!32;UBERON:0001893!4.26e-13!34;UBERON:0002791!2.18e-12!33;UBERON:0002371!3.52e-12!80;UBERON:0001474!3.97e-12!86;UBERON:0002780!8.30e-12!41;UBERON:0001890!8.30e-12!41;UBERON:0006240!8.30e-12!41;UBERON:0002390!1.19e-11!102;UBERON:0003061!1.19e-11!102;UBERON:0003080!3.09e-11!42;UBERON:0002020!5.41e-11!34;UBERON:0003528!5.41e-11!34;UBERON:0002193!5.59e-11!112;UBERON:0001049!2.75e-09!57;UBERON:0005068!2.75e-09!57;UBERON:0006241!2.75e-09!57;UBERON:0007135!2.75e-09!57;UBERON:0000062!1.12e-08!511;UBERON:0000955!1.18e-08!69;UBERON:0006238!1.18e-08!69;UBERON:0002405!4.18e-08!115;UBERON:0002616!7.17e-08!59;UBERON:0001017!1.71e-07!82;UBERON:0003056!9.04e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.66e-24;20!UBERON:0002619;1.82e-21;22!UBERON:0000956;1.36e-18;25!UBERON:0000203;1.36e-18;25!UBERON:0001869;2.84e-17;32!UBERON:0001893;1.63e-16;34!UBERON:0002791;3.03e-15;32!UBERON:0003528;2.23e-13;34!UBERON:0002020;2.23e-13;34!UBERON:0002780;2.63e-10;41!UBERON:0001890;2.63e-10;41!UBERON:0001871;2.64e-10;6!UBERON:0000200;3.32e-08;6!UBERON:0000073;1.78e-07;53!UBERON:0002616;1.78e-07;53!UBERON:0001876;3.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.33e-24,20;UBERON:0002619,1.08e-21,22;UBERON:0002371,6.18e-20,76;UBERON:0001869,8.57e-19,32;UBERON:0000956,8.69e-19,25;UBERON:0000203,8.69e-19,25;UBERON:0001474,5.52e-18,82;UBERON:0001893,1.73e-17,34;UBERON:0002791,2.78e-16,32;UBERON:0001434,3.60e-16,100;UBERON:0004765,8.59e-16,90;UBERON:0003528,3.85e-15,34;UBERON:0002020,3.85e-15,34;UBERON:0002405,4.55e-15,93;UBERON:0002390,5.80e-14,98;UBERON:0003061,5.80e-14,98;UBERON:0002780,6.61e-14,41;UBERON:0001890,6.61e-14,41;UBERON:0003080,6.61e-14,41;UBERON:0006240,6.61e-14,41;UBERON:0002193,4.57e-12,108;UBERON:0000073,2.43e-11,53;UBERON:0002616,2.43e-11,53;UBERON:0001049,1.57e-10,56;UBERON:0005068,1.57e-10,56;UBERON:0006241,1.57e-10,56;UBERON:0007135,1.57e-10,56;UBERON:0001871,3.51e-10,6;UBERON:0003056,2.45e-09,61;UBERON:0000955,6.01e-09,68;UBERON:0006238,6.01e-09,68;UBERON:0000200,3.05e-08,6;UBERON:0001017,7.52e-08,81;UBERON:0002204,1.19e-07,167;UBERON:0001876,5.83e-07,2;UBERON:0003075,7.23e-07,82;UBERON:0007284,7.23e-07,82 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.314843125254717,0,0.767658796194425,0.77408061658038,0,0,0,0,0,0.293600439334847,2.21598163412751,1.80490002723128,1.08505435357926,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,2.78914844286822,0.411167888021826,1.85823822537062,3.16461631554365,1.7931249457037,3.54723344832878,2.75796544589295,3.87290810150296,1.35426486594342,0.564727018627814,0.818718450173537,1.79778787556068,3.06083892370903,1.28371610830437,1.91801137739712,0.659702600373432,0.199463657621632,0.426224750532694,4.93355705668593,1.13477044938228,1.86846674698672,2.76373531782418,1.5644487552606,2.38907729175628,5.44859552370032,5.15588690382591,2.21523671208619,0.211255286311942,0.425208599930087,0,0.22465726229299,0,0.64290234678832,0,0.39783335439818,0,0,0,0,1.28019066769952,0.800791974072025,0,1.98313461835459,0,1.70763890732835,2.93618594685469,4.20500550937752,0,0,0,0.393419540227666,0,0,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,1.62482318259009,0.384273959177026,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0,0,0.403213486449465,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0,0,0.538168907066586,0,0,0.300091096084402,0,0.772921620136887,0.37223371266318,0.506328996723799,0.584622030967192,0.504867548488229,0.0920498986422993,0.484938170456436,0.355009592516614,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0.241011029883482,0.330881918197182,0.217879444092406,0,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,1.7658523976586,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,3.12022310734098,0.771622122786426,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.713715955188647,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.495056999523528,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,1.22849920267187,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.427296284509893,1.92495971052672,0,0.185803175125719,0.28853842595289,0.284567373393656,0.956557636372934,1.1974762285969,0.191505370132367,0,0,0.280797178113459,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,1.1253553312841,0,0.494411622680279,2.53350489753592,0.19924798825107,0.828851746593443,0.251932747854276,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0,0,0.844175070377856,0,0.221158519862449,0,1.31631238292384,0,0.975966209950223,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0.247127877893006,0.313265848516366,0.134802265961354,0,0.468528891450678,1.094728735294,0.19566461893209,0,0,0,1.22429104652196,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0.193978032976839,0.0882561266915003,0,0.137041924646751,0,1.07628353124994,0.195551382734803,0.0801588202515337,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| ||
|short_description=p15@ARID5B | |||
}} | }} |
Latest revision as of 17:57, 18 September 2015
Short description: | p15@ARID5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ARID5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_032199_5end |
EntrezGene: | ARID5B |
HGNC: | 17362 |
UniProt: | Q14865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.64e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.64e-36 | 42 |
defensive cell | 1.57e-33 | 48 |
phagocyte | 1.57e-33 | 48 |
monopoietic cell | 2.06e-25 | 59 |
monocyte | 2.06e-25 | 59 |
monoblast | 2.06e-25 | 59 |
promonocyte | 2.06e-25 | 59 |
macrophage dendritic cell progenitor | 2.28e-24 | 61 |
granulocyte monocyte progenitor cell | 1.61e-23 | 67 |
myeloid lineage restricted progenitor cell | 4.94e-22 | 66 |
myeloid leukocyte | 1.17e-19 | 72 |
nongranular leukocyte | 2.28e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.93e-17 | 120 |
leukocyte | 1.95e-15 | 136 |
myeloid cell | 3.50e-13 | 108 |
common myeloid progenitor | 3.50e-13 | 108 |
hematopoietic stem cell | 9.78e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-12 | 161 |
hematopoietic cell | 1.19e-11 | 177 |
B cell | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.33e-24 | 20 |
regional part of cerebral cortex | 1.08e-21 | 22 |
bone marrow | 6.18e-20 | 76 |
cerebral hemisphere | 8.57e-19 | 32 |
cerebral cortex | 8.69e-19 | 25 |
pallium | 8.69e-19 | 25 |
bone element | 5.52e-18 | 82 |
telencephalon | 1.73e-17 | 34 |
regional part of telencephalon | 2.78e-16 | 32 |
skeletal system | 3.60e-16 | 100 |
skeletal element | 8.59e-16 | 90 |
brain grey matter | 3.85e-15 | 34 |
gray matter | 3.85e-15 | 34 |
immune system | 4.55e-15 | 93 |
hematopoietic system | 5.80e-14 | 98 |
blood island | 5.80e-14 | 98 |
regional part of forebrain | 6.61e-14 | 41 |
forebrain | 6.61e-14 | 41 |
anterior neural tube | 6.61e-14 | 41 |
future forebrain | 6.61e-14 | 41 |
hemolymphoid system | 4.57e-12 | 108 |
regional part of nervous system | 2.43e-11 | 53 |
regional part of brain | 2.43e-11 | 53 |
neural tube | 1.57e-10 | 56 |
neural rod | 1.57e-10 | 56 |
future spinal cord | 1.57e-10 | 56 |
neural keel | 1.57e-10 | 56 |
temporal lobe | 3.51e-10 | 6 |
pre-chordal neural plate | 2.45e-09 | 61 |
brain | 6.01e-09 | 68 |
future brain | 6.01e-09 | 68 |
gyrus | 3.05e-08 | 6 |
central nervous system | 7.52e-08 | 81 |
musculoskeletal system | 1.19e-07 | 167 |
amygdala | 5.83e-07 | 2 |
neural plate | 7.23e-07 | 82 |
presumptive neural plate | 7.23e-07 | 82 |