FFCP PHASE1:Hg19::chr11:94227029..94227051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4361 | |EntrezGene=4361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7230 | |HGNC=7230 | ||
|TSSclassifier=strong | |||
|UniProt=F5H256,P49959,Q05D78 | |UniProt=F5H256,P49959,Q05D78 | ||
|association_with_transcript=0bp_to_ENST00000323977,ENST00000536754,NM_005590,NM_005591,uc001peu.2,uc001pev.2,uc009ywj.2_5end | |association_with_transcript=0bp_to_ENST00000323977,ENST00000536754,NM_005590,NM_005591,uc001peu.2,uc001pev.2,uc009ywj.2_5end | ||
|cluster_id=chr11:94227029..94227051,- | |||
|description=CAGE_peak_2_at_MRE11A_5end | |description=CAGE_peak_2_at_MRE11A_5end | ||
|id=chr11:94227029..94227051,- | |id=chr11:94227029..94227051,- | ||
|ontology_enrichment_celltype=CL:0000037!2.29e-14!172;CL:0000566!2.29e-14!172;CL:0002032!6.45e-13!165;CL:0000837!6.45e-13!165;CL:0000542!1.03e-12!53;CL:0000051!1.03e-12!53;CL:0000838!1.90e-12!52;CL:0000988!2.06e-12!182;CL:0000738!1.37e-09!140;CL:0002031!2.68e-08!124;CL:0002087!4.96e-07!119;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | |ontology_enrichment_celltype=CL:0000037!2.29e-14!172;CL:0000566!2.29e-14!172;CL:0002032!6.45e-13!165;CL:0000837!6.45e-13!165;CL:0000542!1.03e-12!53;CL:0000051!1.03e-12!53;CL:0000838!1.90e-12!52;CL:0000988!2.06e-12!182;CL:0000738!1.37e-09!140;CL:0002031!2.68e-08!124;CL:0002087!4.96e-07!119;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.15e-07;53!CL:0000084;3.30e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.07e-13,168;CL:0000542,7.80e-13,53;CL:0000051,7.80e-13,53;CL:0000838,1.45e-12,52;CL:0000988,7.90e-12,177;CL:0002032,7.95e-12,161;CL:0000837,7.95e-12,161;CL:0000738,1.23e-08,136;CL:0002031,2.95e-07,120;CL:0000084,8.58e-07,25;CL:0000827,8.58e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.15e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.38e-13!235;DOID:14566!3.41e-13!239;DOID:2531!1.34e-08!51;DOID:0060083!1.34e-08!51;DOID:0050686!2.62e-08!137;DOID:0050687!4.04e-08!143;DOID:305!9.19e-08!106 | |ontology_enrichment_disease=DOID:162!1.38e-13!235;DOID:14566!3.41e-13!239;DOID:2531!1.34e-08!51;DOID:0060083!1.34e-08!51;DOID:0050686!2.62e-08!137;DOID:0050687!4.04e-08!143;DOID:305!9.19e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.29e-13,235;DOID:14566,1.04e-12,239;DOID:2531,1.36e-08,51;DOID:0060083,1.36e-08,51;DOID:0050686,3.79e-08,137;DOID:0050687,8.37e-08,143;DOID:305,1.16e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!6.05e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-07,114 | |||
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| ||
|short_description=p2@MRE11A | |short_description=p2@MRE11A | ||
}} | }} |
Latest revision as of 03:25, 25 September 2015
Short description: | p2@MRE11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRE11A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323977, ENST00000536754, NM_005590, NM_005591, uc001peu.2, uc001pev.2, uc009ywj.2_5end |
EntrezGene: | MRE11A |
HGNC: | 7230 |
UniProt: | F5H256P49959Q05D78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.07e-13 | 168 |
lymphocyte | 7.80e-13 | 53 |
common lymphoid progenitor | 7.80e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.45e-12 | 52 |
hematopoietic cell | 7.90e-12 | 177 |
hematopoietic oligopotent progenitor cell | 7.95e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.95e-12 | 161 |
leukocyte | 1.23e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.95e-07 | 120 |
T cell | 8.58e-07 | 25 |
pro-T cell | 8.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.29e-13 | 235 |
disease of cellular proliferation | 1.04e-12 | 239 |
hematologic cancer | 1.36e-08 | 51 |
immune system cancer | 1.36e-08 | 51 |
organ system cancer | 3.79e-08 | 137 |
cell type cancer | 8.37e-08 | 143 |
carcinoma | 1.16e-07 | 106 |