FFCP PHASE1:Hg19::chr16:87872373..87872412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87872373..87872412,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87872373..87872412,- | |description=CAGE_peak_at_chr16:87872373..87872412,- | ||
|id=chr16:87872373..87872412,- | |id=chr16:87872373..87872412,- | ||
|ontology_enrichment_celltype=CL:0000066!1.34e-19!254;CL:0002076!2.42e-10!43;CL:0000223!1.98e-09!59 | |ontology_enrichment_celltype=CL:0000066!1.34e-19!254;CL:0002076!2.42e-10!43;CL:0000223!1.98e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.18e-11;42!CL:0002077;5.41e-08;34!CL:0002368;4.27e-07;13!CL:0002231;7.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.84e-22,253;CL:0002076,2.11e-15,42;CL:0000223,9.42e-13,58;CL:0002077,3.71e-09,34;CL:0002368,3.35e-07,13;CL:0000076,5.30e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;3.19e-08;58 | |||
|ontology_enrichment_disease=DOID:162!2.34e-17!235;DOID:0050687!7.34e-17!143;DOID:14566!8.23e-17!239;DOID:305!4.90e-13!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.36e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.42e-11,143;DOID:305,2.77e-08,106;DOID:1749,1.40e-07,14;DOID:162,4.35e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.27e-07;15!UBERON:0007376;4.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,2.38e-07,15;UBERON:0007376,2.38e-07,15;UBERON:0007383,2.38e-07,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,1.83884244895785,0.90361775633475,4.43704812200145,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.464858073811369,0.411167888021826,1.23882548358041,0.28769239232215,0,0.945928919554341,1.37898272294647,0,0,0.376484679085209,1.63743690034707,0.674170453335254,2.44867113896722,0.320929027076094,1.27867425159808,0.329851300186716,0,0,2.32167390902867,2.26954089876456,1.86846674698672,1.25624332628372,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33720097891754,0,0,0.670700859703636,0,0.361439152384566,0,1.15877215168659,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.196468613246569,2.18577172975525,1.48313777113772,0,0,0.132957960518865,0,1.71598473234038,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,1.49091585508596,0.12663051166458,0,0.860509862246441,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0.70296429550139,0,0,0,0.352303495931295,0,0.280901613404497,0,0.122834317311768,0.309977343527296,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.558350568994769,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.201504196455281,0,1.35282597214308,0.545492241181669,1.43402297694502,0.243947412259191,0,0.232387885739037,0,0.252320850875628,0,0,1.28648187638577,0,0,0,1.65629520055781,0.842923450390509,0.723033089650446,1.65440959098591,0.435758888184812,0.949082476444386,2.02246962240247,0.98110732562673,1.53898862778556,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0.343135620597051,2.85350742062426,3.37205259772859,2.71428225511403,1.66659201285353,0.325808305310325,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0.234004265139238,0,0,0.503946384596579,0.283550194484773,1.52249488594842,1.74380363108377,2.68367875415648,0,0.176096868026452,0,0.288239906833923,0,0.761974731506028,0.763976851116555,4.68869788840188,0,1.85089486865982,1.50171528921959,2.85826432630578,0.112131084345361,0.87192013766656,0,0.775630294546667,0,0,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.144781306667579,0.410952645100767,0,0.672510863961164,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,1.60586089917446,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0.606255142892519,3.32870879020994,1.20956117331872,0,0.153461973288062,0.841980283299221,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,1.0877350463246,3.40860999515584,7.91896504848708,0.68888668898764,1.0925470080403,0.131124414959424,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,1.0795795805107,0,0,0.501689773854853,0,0,0.223874754722178,0.877039506583738,0.261435451024901,0.769350375349168,0.328014645699706,1.30151357865721,0.206082023295445,0.27470839445503,0.41254749960294,1.72279661398852,6.50060246036521,0,0.870036464629098,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.712256285173899,3.63626813794152,7.68760269460425,0.255225424989168,5.96830907047745,0.464845549297286,2.20368642781448,0,1.23213432070436,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.272999822815972,0.848432591722276,0,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0,0.563391205064483,0.286822704408103,0.392996164052485,0.35667105148125,0,0.844430541190656,0,0,0.349934720244983,0.962221127255121,0.670302275535787,5.44454924306613,0.188287601553558,3.87454835404107,0,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0,0.79312517629427,0.106824071127473,1.92495971052672,1.22520107990516,0.185803175125719,0.28853842595289,0.284567373393656,0,0.59873811429845,0,0.211673582723883,0,0.280797178113459,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0.278406173895242,0,0.811367035427949,0,0,0.37428108081644,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.556543525114529,0.494411622680279,0.211125408127993,0,0,0,0.20453736500431,0.123084805461069,0.622079175323615,0.269605053441981,2.68531762013414,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,8.3336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|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,1.83884244895785,0.90361775633475,4.43704812200145,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.464858073811369,0.411167888021826,1.23882548358041,0.28769239232215,0,0.945928919554341,1.37898272294647,0,0,0.376484679085209,1.63743690034707,0.674170453335254,2.44867113896722,0.320929027076094,1.27867425159808,0.329851300186716,0,0,2.32167390902867,2.26954089876456,1.86846674698672,1.25624332628372,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33720097891754,0,0,0.670700859703636,0,0.361439152384566,0,1.15877215168659,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.196468613246569,2.18577172975525,1.48313777113772,0,0,0.132957960518865,0,1.71598473234038,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,1.49091585508596,0.12663051166458,0,0.860509862246441,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0.70296429550139,0,0,0,0.352303495931295,0,0.280901613404497,0,0.122834317311768,0.309977343527296,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.558350568994769,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.201504196455281,0,1.35282597214308,0.545492241181669,1.43402297694502,0.243947412259191,0,0.232387885739037,0,0.252320850875628,0,0,1.28648187638577,0,0,0,1.65629520055781,0.842923450390509,0.723033089650446,1.65440959098591,0.435758888184812,0.949082476444386,2.02246962240247,0.98110732562673,1.53898862778556,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0.343135620597051,2.85350742062426,3.37205259772859,2.71428225511403,1.66659201285353,0.325808305310325,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0.234004265139238,0,0,0.503946384596579,0.283550194484773,1.52249488594842,1.74380363108377,2.68367875415648,0,0.176096868026452,0,0.288239906833923,0,0.761974731506028,0.763976851116555,4.68869788840188,0,1.85089486865982,1.50171528921959,2.85826432630578,0.112131084345361,0.87192013766656,0,0.775630294546667,0,0,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.144781306667579,0.410952645100767,0,0.672510863961164,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,1.60586089917446,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0.606255142892519,3.32870879020994,1.20956117331872,0,0.153461973288062,0.841980283299221,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,1.0877350463246,3.40860999515584,7.91896504848708,0.68888668898764,1.0925470080403,0.131124414959424,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,1.0795795805107,0,0,0.501689773854853,0,0,0.223874754722178,0.877039506583738,0.261435451024901,0.769350375349168,0.328014645699706,1.30151357865721,0.206082023295445,0.27470839445503,0.41254749960294,1.72279661398852,6.50060246036521,0,0.870036464629098,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.712256285173899,3.63626813794152,7.68760269460425,0.255225424989168,5.96830907047745,0.464845549297286,2.20368642781448,0,1.23213432070436,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.272999822815972,0.848432591722276,0,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0,0.563391205064483,0.286822704408103,0.392996164052485,0.35667105148125,0,0.844430541190656,0,0,0.349934720244983,0.962221127255121,0.670302275535787,5.44454924306613,0.188287601553558,3.87454835404107,0,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0,0.79312517629427,0.106824071127473,1.92495971052672,1.22520107990516,0.185803175125719,0.28853842595289,0.284567373393656,0,0.59873811429845,0,0.211673582723883,0,0.280797178113459,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0.278406173895242,0,0.811367035427949,0,0,0.37428108081644,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.556543525114529,0.494411622680279,0.211125408127993,0,0,0,0.20453736500431,0.123084805461069,0.622079175323615,0.269605053441981,2.68531762013414,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,8.3336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| ||
|short_description=p@chr16:87872373..87872412,- | |short_description=p@chr16:87872373..87872412,- | ||
}} | }} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87872373..87872412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87872373..87872412, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.84e-22 | 253 |
endo-epithelial cell | 2.11e-15 | 42 |
endodermal cell | 9.42e-13 | 58 |
ecto-epithelial cell | 3.71e-09 | 34 |
respiratory epithelial cell | 3.35e-07 | 13 |
squamous epithelial cell | 5.30e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 2.38e-07 | 15 |
outer epithelium | 2.38e-07 | 15 |
enveloping layer of ectoderm | 2.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.42e-11 | 143 |
carcinoma | 2.77e-08 | 106 |
squamous cell carcinoma | 1.40e-07 | 14 |
cancer | 4.35e-07 | 235 |