FFCP PHASE1:Hg19::chr16:87425788..87425833,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81631 | |EntrezGene=81631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13352 | |HGNC=13352 | ||
|TSSclassifier=strong | |||
|UniProt=Q658J6,Q9GZQ8 | |UniProt=Q658J6,Q9GZQ8 | ||
|association_with_transcript=0bp_to_NM_022818,uc002fjx.2,uc010chs.2_5end | |association_with_transcript=0bp_to_NM_022818,uc002fjx.2,uc010chs.2_5end | ||
|cluster_id=chr16:87425788..87425833,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_MAP1LC3B_5end | |description=CAGE_peak_3_at_MAP1LC3B_5end | ||
|id=chr16:87425788..87425833,+ | |id=chr16:87425788..87425833,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;2.97e-19;1!CL:0000047;2.60e-10;2!CL:0002567;2.71e-07;3!CL:0000307;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.79e-07,3;CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!CL:0000377;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-18!82;UBERON:0005743!8.63e-18!86;UBERON:0000073!1.73e-17!94;UBERON:0001016!1.73e-17!94;UBERON:0000955!5.72e-17!69;UBERON:0006238!5.72e-17!69;UBERON:0002616!1.62e-14!59;UBERON:0002780!1.89e-13!41;UBERON:0001890!1.89e-13!41;UBERON:0006240!1.89e-13!41;UBERON:0001049!4.32e-13!57;UBERON:0005068!4.32e-13!57;UBERON:0006241!4.32e-13!57;UBERON:0007135!4.32e-13!57;UBERON:0003080!6.22e-13!42;UBERON:0001869!5.87e-12!32;UBERON:0001893!6.23e-12!34;UBERON:0002791!3.48e-11!33;UBERON:0002020!6.03e-11!34;UBERON:0003528!6.03e-11!34;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0003056!3.31e-10!61;UBERON:0002346!1.11e-09!90;UBERON:0004121!1.25e-09!169;UBERON:0000033!1.56e-09!123;UBERON:0000956!1.93e-09!25;UBERON:0000203!1.93e-09!25;UBERON:0000924!4.93e-09!173;UBERON:0006601!4.93e-09!173;UBERON:0001950!9.31e-09!20;UBERON:0002619!1.05e-08!22;UBERON:0000153!1.77e-08!129;UBERON:0007811!1.77e-08!129;UBERON:0007023!8.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;2.60e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,2.07e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.378139268656271,0,0.175669571386252,21.2840997683783,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0.462629081407967,0,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,1.99613798001194,0.520855522170466,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.443175571691151,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0.318004350653419,0,0,0,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.253663240775627,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0,0,0,0.611727596791485,0.591954962065642,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,47.3616863863996,85.4805575198209,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.378139268656271,0,0.175669571386252,21.2840997683783,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0.462629081407967,0,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,1.99613798001194,0.520855522170466,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.443175571691151,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0.318004350653419,0,0,0,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.253663240775627,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0,0,0,0.611727596791485,0.591954962065642,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,47.3616863863996,85.4805575198209,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MAP1LC3B | |short_description=p3@MAP1LC3B | ||
}} | }} |
Latest revision as of 07:42, 18 September 2015
Short description: | p3@MAP1LC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP1LC3B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_022818, uc002fjx.2, uc010chs.2_5end |
EntrezGene: | MAP1LC3B |
HGNC: | 13352 |
UniProt: | Q658J6Q9GZQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.79e-07 | 3 |
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amygdala | 2.07e-10 | 2 |
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |