FFCP PHASE1:Hg19::chr11:76381029..76381041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2615 | |EntrezGene=2615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4161 | |HGNC=4161 | ||
|TSSclassifier=strong | |||
|UniProt=Q14392,C9JYU3 | |UniProt=Q14392,C9JYU3 | ||
|association_with_transcript=2bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | |association_with_transcript=2bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | ||
|cluster_id=chr11:76381029..76381041,- | |||
|coexpression_cluster_id=C2167 | |||
|description=CAGE_peak_6_at_LRRC32_5end | |description=CAGE_peak_6_at_LRRC32_5end | ||
|id=chr11:76381029..76381041,- | |id=chr11:76381029..76381041,- | ||
|ontology_enrichment_celltype=CL:0002334!8.46e-11!12;CL:0000057!1.20e-09!75;CL:0000136!1.70e-08!15;CL:0000055!2.71e-08!180;CL:0002570!1.08e-07!8;CL:0005020!3.01e-07!6;CL:0002138!3.01e-07!6;CL:0005022!3.01e-07!6 | |ontology_enrichment_celltype=CL:0002334!8.46e-11!12;CL:0000057!1.20e-09!75;CL:0000136!1.70e-08!15;CL:0000055!2.71e-08!180;CL:0002570!1.08e-07!8;CL:0005020!3.01e-07!6;CL:0002138!3.01e-07!6;CL:0005022!3.01e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.55e-27;12!CL:0002580;5.05e-17;3!CL:0002579;1.13e-16;3!CL:0002569;2.50e-14;6!CL:0000349;1.96e-09;19!CL:0000134;1.53e-08;55!CL:0002615;6.94e-08;3!CL:0002582;6.94e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.42e-27,12;CL:0002580,3.20e-17,3;CL:0002579,1.23e-16,3;CL:0002569,2.89e-14,6;CL:0000349,2.09e-09,19;CL:0002615,9.19e-08,3;CL:0000057,1.13e-07,76;CL:0002582,1.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!8.83e-09!6;UBERON:0002358!8.83e-09!6;UBERON:0003684!8.83e-09!6;UBERON:0001178!8.83e-09!6;UBERON:0001009!1.38e-07!113;UBERON:0004535!1.48e-07!110;UBERON:0001473!4.77e-07!8;UBERON:0004536!4.77e-07!8;UBERON:0006558!4.77e-07!8;UBERON:0002049!4.95e-07!79;UBERON:0007798!4.95e-07!79;UBERON:0002465!5.60e-07!10;UBERON:0004872!7.72e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.73e-22;6!UBERON:0002358;6.73e-22;6!UBERON:0003684;6.73e-22;6!UBERON:0001178;6.73e-22;6!UBERON:0004457;1.53e-14;9!UBERON:0000042;1.53e-14;9!UBERON:0003422;2.50e-14;6!UBERON:0003104;2.66e-12;7!UBERON:0009142;2.66e-12;7!UBERON:0000310;8.22e-09;10!UBERON:0002331;1.21e-08;10!UBERON:0001443;5.13e-08;11!UBERON:0000478;2.39e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.03e-21,6;UBERON:0002358,1.03e-21,6;UBERON:0003684,1.03e-21,6;UBERON:0001178,1.03e-21,6;UBERON:0003422,2.89e-14,6;UBERON:0004457,9.23e-11,12;UBERON:0000042,9.23e-11,12;UBERON:0000310,6.85e-09,10;UBERON:0002331,1.32e-08,10;UBERON:0000358,1.32e-08,10;UBERON:0000307,1.32e-08,10;UBERON:0000091,1.32e-08,10;UBERON:0000087,1.32e-08,10;UBERON:0007010,1.32e-08,10;UBERON:0007806,1.32e-08,10;UBERON:0008780,1.32e-08,10;UBERON:0005728,1.32e-08,10;UBERON:0001443,4.35e-08,11;UBERON:0000478,2.51e-07,24 | |||
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| ||
|short_description=p6@LRRC32 | |short_description=p6@LRRC32 | ||
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Latest revision as of 08:03, 20 September 2015
Short description: | p6@LRRC32 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRRC32_5end |
Coexpression cluster: | C2167_Mesenchymal_Renal_Preadipocyte_tenocyte_Adipocyte_mesenchymal_Multipotent |
Association with transcript: | 2bp_to_ENST00000407242, ENST00000421973, NM_005512, uc001oxq.3, uc010rsf.1_5end |
EntrezGene: | LRRC32 |
HGNC: | 4161 |
UniProt: | Q14392C9JYU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.42e-27 | 12 |
preadipocyte of the breast | 3.20e-17 | 3 |
omentum preadipocyte | 1.23e-16 | 3 |
mesenchymal stem cell of umbilical cord | 2.89e-14 | 6 |
extraembryonic cell | 2.09e-09 | 19 |
adipocyte of omentum tissue | 9.19e-08 | 3 |
fibroblast | 1.13e-07 | 76 |
visceral preadipocyte | 1.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.03e-21 | 6 |
peritoneum | 1.03e-21 | 6 |
abdominal cavity | 1.03e-21 | 6 |
visceral peritoneum | 1.03e-21 | 6 |
mesenchyme of umbilical cord | 2.89e-14 | 6 |
cavity lining | 9.23e-11 | 12 |
serous membrane | 9.23e-11 | 12 |
breast | 6.85e-09 | 10 |
umbilical cord | 1.32e-08 | 10 |
blastocyst | 1.32e-08 | 10 |
blastula | 1.32e-08 | 10 |
bilaminar disc | 1.32e-08 | 10 |
inner cell mass | 1.32e-08 | 10 |
cleaving embryo | 1.32e-08 | 10 |
connecting stalk | 1.32e-08 | 10 |
inner cell mass derived epiblast | 1.32e-08 | 10 |
extraembryonic mesoderm | 1.32e-08 | 10 |
chest | 4.35e-08 | 11 |
extraembryonic structure | 2.51e-07 | 24 |