FFCP PHASE1:Hg19::chr16:81528948..81528967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80790 | |EntrezGene=80790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |HGNC=24319 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY22 | |UniProt=Q8IY22 | ||
|association_with_transcript=0bp_to_ENST00000539778,NM_030629,uc002fgq.1_5end | |association_with_transcript=0bp_to_ENST00000539778,NM_030629,uc002fgq.1_5end | ||
|cluster_id=chr16:81528948..81528967,+ | |||
|description=CAGE_peak_9_at_CMIP_5end | |description=CAGE_peak_9_at_CMIP_5end | ||
|id=chr16:81528948..81528967,+ | |id=chr16:81528948..81528967,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.89e-27!24;CL:0000115!1.86e-20!35;CL:0000763!7.53e-19!112;CL:0000049!7.53e-19!112;CL:0002078!3.03e-18!44;CL:0000071!1.03e-17!18;CL:0002546!1.03e-17!18;CL:0000213!1.09e-13!57;CL:0000215!1.09e-13!57;CL:0005020!2.33e-11!6;CL:0002138!2.33e-11!6;CL:0005022!2.33e-11!6;CL:0000037!1.22e-10!172;CL:0000566!1.22e-10!172;CL:0002274!2.55e-10!5;CL:0000457!2.55e-10!5;CL:0002191!2.55e-10!5;CL:0000097!2.55e-10!5;CL:0000831!2.55e-10!5;CL:0002028!2.55e-10!5;CL:0002032!2.98e-10!165;CL:0000837!2.98e-10!165;CL:0000163!4.32e-10!9;CL:0000988!4.93e-10!182;CL:1000413!6.82e-10!9;CL:0000839!1.55e-09!70;CL:0000766!4.06e-09!76;CL:0000557!3.03e-08!71;CL:0002543!1.13e-07!6 | |ontology_enrichment_celltype=CL:0002139!4.89e-27!24;CL:0000115!1.86e-20!35;CL:0000763!7.53e-19!112;CL:0000049!7.53e-19!112;CL:0002078!3.03e-18!44;CL:0000071!1.03e-17!18;CL:0002546!1.03e-17!18;CL:0000213!1.09e-13!57;CL:0000215!1.09e-13!57;CL:0005020!2.33e-11!6;CL:0002138!2.33e-11!6;CL:0005022!2.33e-11!6;CL:0000037!1.22e-10!172;CL:0000566!1.22e-10!172;CL:0002274!2.55e-10!5;CL:0000457!2.55e-10!5;CL:0002191!2.55e-10!5;CL:0000097!2.55e-10!5;CL:0000831!2.55e-10!5;CL:0002028!2.55e-10!5;CL:0002032!2.98e-10!165;CL:0000837!2.98e-10!165;CL:0000163!4.32e-10!9;CL:0000988!4.93e-10!182;CL:1000413!6.82e-10!9;CL:0000839!1.55e-09!70;CL:0000766!4.06e-09!76;CL:0000557!3.03e-08!71;CL:0002543!1.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.54e-21;24!CL:0000071;4.08e-14;18!CL:0000115;8.49e-14;36!CL:0002078;9.22e-12;45!CL:0000097;2.95e-11;5!CL:0000163;1.66e-10;9!CL:1000413;4.60e-10;9!CL:0002544;6.02e-09;6!CL:0002138;1.01e-08;6!CL:0000213;6.35e-08;58!CL:0000215;6.35e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.76e-21,24;CL:0000115,2.46e-16,36;CL:0002078,4.15e-15,45;CL:0000071,2.97e-14,18;CL:0002546,2.97e-14,18;CL:0000097,3.11e-11,5;CL:0002028,3.11e-11,5;CL:0000213,3.32e-11,58;CL:0000215,3.32e-11,58;CL:0000163,2.02e-10,9;CL:1000413,3.80e-10,9;CL:0000763,5.29e-10,108;CL:0000049,5.29e-10,108;CL:0002544,4.16e-09,6;CL:0005020,1.27e-08,6;CL:0002138,1.27e-08,6;CL:0005022,1.27e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.08e-14;18!CL:0005022;1.01e-08;6 | |||
|ontology_enrichment_disease=DOID:8692!3.43e-14!31;DOID:1036!4.96e-11!8;DOID:1240!2.84e-10!39;DOID:2531!8.54e-07!51;DOID:0060083!8.54e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.72e-19;31!DOID:1240;9.74e-12;39!DOID:1036;1.26e-11;8!DOID:2531;1.95e-07;51!DOID:0060083;1.95e-07;51!DOID:9119;4.25e-07;1!DOID:8552;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.93e-20,31;DOID:1240,1.15e-15,39;DOID:1036,1.41e-11,8;DOID:2531,1.75e-11,51;DOID:0060083,1.75e-11,51;DOID:9119,3.78e-07,1;DOID:8552,7.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.78e-19!112;UBERON:0001986!1.03e-17!18;UBERON:0004638!1.03e-17!18;UBERON:0004852!1.03e-17!18;UBERON:0002390!5.12e-14!102;UBERON:0003061!5.12e-14!102;UBERON:0000487!9.12e-14!22;UBERON:0003081!1.80e-12!216;UBERON:0006914!1.19e-11!25;UBERON:0002405!3.22e-10!115;UBERON:0003915!6.82e-10!9;UBERON:0004700!6.82e-10!9;UBERON:0001917!6.82e-10!9;UBERON:0004535!1.96e-09!110;UBERON:0000178!4.02e-09!15;UBERON:0000179!4.02e-09!15;UBERON:0000463!4.02e-09!15;UBERON:0001009!5.91e-09!113;UBERON:0002465!2.81e-08!10;UBERON:0001473!2.83e-08!8;UBERON:0004536!2.83e-08!8;UBERON:0006558!2.83e-08!8;UBERON:0000055!3.03e-08!69;UBERON:0002371!2.17e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.08e-14;18!UBERON:0001986;4.08e-14;18!UBERON:0004852;4.08e-14;18!UBERON:0000178;3.82e-13;15!UBERON:0000179;3.82e-13;15!UBERON:0000463;3.82e-13;15!UBERON:0000487;2.15e-11;22!UBERON:0003915;4.60e-10;9!UBERON:0004700;4.60e-10;9!UBERON:0001917;4.60e-10;9!UBERON:0006914;6.36e-10;25!UBERON:0002193;5.73e-07;42!UBERON:0000490;7.79e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.97e-14,18;UBERON:0001986,2.97e-14,18;UBERON:0004852,2.97e-14,18;UBERON:0000178,3.92e-13,15;UBERON:0000179,3.92e-13,15;UBERON:0000463,3.92e-13,15;UBERON:0000487,1.67e-11,22;UBERON:0004535,4.83e-11,109;UBERON:0001009,1.19e-10,112;UBERON:0003915,3.80e-10,9;UBERON:0004700,3.80e-10,9;UBERON:0001917,3.80e-10,9;UBERON:0006914,5.10e-10,25;UBERON:0000055,1.06e-07,68 | |||
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| ||
|short_description=p9@CMIP | |short_description=p9@CMIP | ||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p9@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CMIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539778, NM_030629, uc002fgq.1_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.76e-21 | 24 |
endothelial cell | 2.46e-16 | 36 |
meso-epithelial cell | 4.15e-15 | 45 |
blood vessel endothelial cell | 2.97e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.97e-14 | 18 |
mast cell | 3.11e-11 | 5 |
basophil mast progenitor cell | 3.11e-11 | 5 |
lining cell | 3.32e-11 | 58 |
barrier cell | 3.32e-11 | 58 |
endocrine cell | 2.02e-10 | 9 |
endothelial cell of artery | 3.80e-10 | 9 |
myeloid cell | 5.29e-10 | 108 |
common myeloid progenitor | 5.29e-10 | 108 |
aortic endothelial cell | 4.16e-09 | 6 |
lymphangioblast | 1.27e-08 | 6 |
endothelial cell of lymphatic vessel | 1.27e-08 | 6 |
vascular lymphangioblast | 1.27e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.97e-14 | 18 |
endothelium | 2.97e-14 | 18 |
cardiovascular system endothelium | 2.97e-14 | 18 |
blood | 3.92e-13 | 15 |
haemolymphatic fluid | 3.92e-13 | 15 |
organism substance | 3.92e-13 | 15 |
simple squamous epithelium | 1.67e-11 | 22 |
cardiovascular system | 4.83e-11 | 109 |
circulatory system | 1.19e-10 | 112 |
endothelial tube | 3.80e-10 | 9 |
arterial system endothelium | 3.80e-10 | 9 |
endothelium of artery | 3.80e-10 | 9 |
squamous epithelium | 5.10e-10 | 25 |
vessel | 1.06e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.93e-20 | 31 |
leukemia | 1.15e-15 | 39 |
chronic leukemia | 1.41e-11 | 8 |
hematologic cancer | 1.75e-11 | 51 |
immune system cancer | 1.75e-11 | 51 |
acute myeloid leukemia | 3.78e-07 | 1 |
chronic myeloid leukemia | 7.57e-07 | 1 |