FFCP PHASE1:Hg19::chr11:73363887..73363920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58473 | |EntrezGene=58473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19079 | |HGNC=19079 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=222bp_to_ENST00000540157_5end | |association_with_transcript=222bp_to_ENST00000540157_5end | ||
|cluster_id=chr11:73363887..73363920,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_13_at_PLEKHB1_5end | |description=CAGE_peak_13_at_PLEKHB1_5end | ||
|id=chr11:73363887..73363920,+ | |id=chr11:73363887..73363920,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.07e-12!10;CL:0000541!1.07e-12!10;CL:0000147!7.53e-09!14 | |ontology_enrichment_celltype=CL:0000148!1.07e-12!10;CL:0000541!1.07e-12!10;CL:0000147!7.53e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.15e-25;10!CL:0002567;2.17e-21;3!CL:0000147;5.51e-18;14!CL:0000710;1.08e-12;20!CL:0000075;1.79e-09;27!CL:0000047;6.67e-09;2!CL:0002077;7.04e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.65e-25,10;CL:0000541,5.65e-25,10;CL:0002567,2.41e-21,3;CL:0000147,5.89e-18,14;CL:0000710,1.13e-12,20;CL:0000075,1.85e-09,27;CL:0002077,1.47e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.78e-16;1 | |||
|ontology_enrichment_disease=DOID:1909!1.11e-08!2 | |ontology_enrichment_disease=DOID:1909!1.11e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;6.27e-32;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.27e-32,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;4.02e-21;3!UBERON:0005290;4.02e-21;3!UBERON:0002336;1.78e-16;1!UBERON:0011215;1.78e-16;1!UBERON:0001018;1.78e-16;1!UBERON:0002473;1.78e-16;1!UBERON:0005340;1.78e-16;1!UBERON:0003544;1.78e-16;1!UBERON:0005970;1.78e-16;1!UBERON:0002316;1.78e-16;1!UBERON:0001020;1.78e-16;1!UBERON:0002437;1.78e-16;1!UBERON:0002298;4.60e-11;6!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.96e-21,3;UBERON:0005290,2.96e-21,3;UBERON:0010096,2.96e-21,3;UBERON:0002336,3.07e-16,1;UBERON:0011215,3.07e-16,1;UBERON:0001018,3.07e-16,1;UBERON:0002473,3.07e-16,1;UBERON:0005340,3.07e-16,1;UBERON:0003544,3.07e-16,1;UBERON:0005970,3.07e-16,1;UBERON:0002316,3.07e-16,1;UBERON:0001020,3.07e-16,1;UBERON:0002437,3.07e-16,1;UBERON:0002298,3.95e-11,6;UBERON:0003076,9.19e-10,15;UBERON:0003057,9.19e-10,15;UBERON:0005162,8.74e-09,2;UBERON:0000122,8.74e-09,2 | |||
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| ||
|short_description=p13@PLEKHB1 | |short_description=p13@PLEKHB1 | ||
}} | }} |
Latest revision as of 03:27, 20 September 2015
Short description: | p13@PLEKHB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLEKHB1_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 222bp_to_ENST00000540157_5end |
EntrezGene: | PLEKHB1 |
HGNC: | 19079 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.65e-25 | 10 |
melanoblast | 5.65e-25 | 10 |
light melanocyte | 2.41e-21 | 3 |
pigment cell | 5.89e-18 | 14 |
neurecto-epithelial cell | 1.13e-12 | 20 |
columnar/cuboidal epithelial cell | 1.85e-09 | 27 |
ecto-epithelial cell | 1.47e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.96e-21 | 3 |
myelencephalon | 2.96e-21 | 3 |
future myelencephalon | 2.96e-21 | 3 |
corpus callosum | 3.07e-16 | 1 |
central nervous system cell part cluster | 3.07e-16 | 1 |
axon tract | 3.07e-16 | 1 |
intercerebral commissure | 3.07e-16 | 1 |
dorsal telencephalic commissure | 3.07e-16 | 1 |
brain white matter | 3.07e-16 | 1 |
brain commissure | 3.07e-16 | 1 |
white matter | 3.07e-16 | 1 |
nervous system commissure | 3.07e-16 | 1 |
cerebral hemisphere white matter | 3.07e-16 | 1 |
brainstem | 3.95e-11 | 6 |
posterior neural tube | 9.19e-10 | 15 |
chordal neural plate | 9.19e-10 | 15 |
multi cell component structure | 8.74e-09 | 2 |
neuron projection bundle | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.27e-32 | 2 |