FFCP PHASE1:Hg19::chr16:71879001..71879011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:71879001..71879011,+ | |||
|coexpression_cluster_id=C2387 | |||
|description=CAGE_peak_at_chr16:71879001..71879011,+ | |description=CAGE_peak_at_chr16:71879001..71879011,+ | ||
|id=chr16:71879001..71879011,+ | |id=chr16:71879001..71879011,+ | ||
|ontology_enrichment_celltype=CL:0000313!4.44e-18!1;CL:0000159!1.03e-09!2;CL:0000239!8.62e-07!3;CL:1000615!8.62e-07!3;CL:0002306!8.62e-07!3 | |ontology_enrichment_celltype=CL:0000313!4.44e-18!1;CL:0000159!1.03e-09!2;CL:0000239!8.62e-07!3;CL:1000615!8.62e-07!3;CL:0002306!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.12e-50;1!CL:0000159;8.10e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.58e-50,1;CL:0000159,9.18e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.50e-45;10!UBERON:0007687;4.50e-45;10!UBERON:0003104;9.35e-16;31 | |||
|ontology_enrichment_disease=DOID:2152!4.44e-18!1;DOID:4468!1.12e-09!2;DOID:3493!1.33e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.12e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.58e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0004911!4.44e-18!1;UBERON:0002146!1.03e-17!1;UBERON:0005623!1.03e-17!1;UBERON:0002113!2.87e-10!27;UBERON:0003918!2.87e-10!27;UBERON:0005095!2.87e-10!27;UBERON:0007687!2.87e-10!27;UBERON:0004909!1.03e-09!2;UBERON:0000489!1.05e-08!32;UBERON:0005172!1.27e-07!55;UBERON:0005173!1.27e-07!55;UBERON:0002417!7.19e-07!61;UBERON:0000916!7.19e-07!61;UBERON:0006853!8.62e-07!3;UBERON:0007685!8.62e-07!3;UBERON:0004134!8.62e-07!3;UBERON:0003978!9.12e-07!3;UBERON:0009751!9.12e-07!3;UBERON:0000946!9.12e-07!3;UBERON:0002523!9.12e-07!3;UBERON:0005983!9.12e-07!3;UBERON:0002165!9.12e-07!3;UBERON:0002062!9.12e-07!3;UBERON:0007280!9.12e-07!3;UBERON:0002110!9.64e-07!3;UBERON:0006242!9.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0002113;1.94e-19;24!UBERON:0011143;1.94e-19;24!UBERON:0000489;2.90e-16;29!UBERON:0006554;9.35e-16;30!UBERON:0001008;9.35e-16;30!UBERON:0005172;5.07e-07;52!UBERON:0005173;5.07e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0002113,4.90e-18,26;UBERON:0003918,4.90e-18,26;UBERON:0011143,4.90e-18,26;UBERON:0005095,4.90e-18,26;UBERON:0007687,4.90e-18,26;UBERON:0000489,2.73e-15,31;UBERON:0006554,2.10e-10,47;UBERON:0001008,3.32e-10,48;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0003103,1.88e-07,68 | |||
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|short_description=p@chr16:71879001..71879011,+ | |short_description=p@chr16:71879001..71879011,+ | ||
}} | }} |
Latest revision as of 12:07, 25 July 2015
Short description: | p@chr16:71879001..71879011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:71879001..71879011, + |
Coexpression cluster: | C2387_kidney_renal_serous_smallcell_clear_mesothelioma_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.58e-50 | 1 |
seromucus secreting cell | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.58e-50 | 1 |
epithelium of gonad | 9.18e-26 | 2 |
kidney | 4.90e-18 | 26 |
kidney mesenchyme | 4.90e-18 | 26 |
upper urinary tract | 4.90e-18 | 26 |
kidney rudiment | 4.90e-18 | 26 |
kidney field | 4.90e-18 | 26 |
cavitated compound organ | 2.73e-15 | 31 |
urinary system structure | 2.10e-10 | 47 |
renal system | 3.32e-10 | 48 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
compound organ | 1.88e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.58e-50 | 1 |