FFCP PHASE1:Hg19::chr16:68867685..68867705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:68867685..68867705,+ | |||
|coexpression_cluster_id=C2385 | |||
|description=CAGE_peak_at_chr16:68867685..68867705,+ | |description=CAGE_peak_at_chr16:68867685..68867705,+ | ||
|id=chr16:68867685..68867705,+ | |id=chr16:68867685..68867705,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.83e-19!43;CL:0000066!3.80e-18!254;CL:0000223!7.48e-18!59;CL:0000039!1.97e-12!7;CL:0000586!1.97e-12!7;CL:0002251!2.79e-10!21 | |ontology_enrichment_celltype=CL:0002076!1.83e-19!43;CL:0000066!3.80e-18!254;CL:0000223!7.48e-18!59;CL:0000039!1.97e-12!7;CL:0000586!1.97e-12!7;CL:0002251!2.79e-10!21 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.38e-08;7!CL:0000586;3.38e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.09e-08,58;CL:0000039,4.67e-08,7;CL:0000586,4.67e-08,7;CL:0000066,1.16e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.22e-07;1!UBERON:0006242;4.46e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.03e-22!106;DOID:1749!6.51e-19!14;DOID:0050687!9.02e-19!143;DOID:162!2.17e-10!235;DOID:14566!7.29e-10!239;DOID:299!1.92e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.26e-10;14!DOID:1799;1.20e-07;1!DOID:10165;1.20e-07;1!DOID:1798;1.20e-07;1!DOID:3111;2.22e-07;1!DOID:3603;2.22e-07;1!DOID:0050619;4.46e-07;1!DOID:1357;4.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.22e-16,106;DOID:0050687,6.58e-14,143;DOID:1749,1.37e-10,14;DOID:162,1.41e-09,235;DOID:14566,2.82e-09,239;DOID:1799,1.20e-07,1;DOID:10165,1.20e-07,1;DOID:1798,1.20e-07,1;DOID:3111,1.97e-07,1;DOID:3603,1.97e-07,1;DOID:0050619,2.67e-07,1;DOID:1357,2.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.44e-15!169;UBERON:0000925!4.44e-15!169;UBERON:0006595!4.44e-15!169;UBERON:0001007!8.11e-12!155;UBERON:0001555!8.11e-12!155;UBERON:0007026!8.11e-12!155;UBERON:0005911!1.20e-10!82;UBERON:0000344!2.34e-09!12;UBERON:0004921!2.80e-09!129;UBERON:0004185!2.80e-09!129;UBERON:0000077!6.83e-08!130;UBERON:0001004!7.56e-08!72;UBERON:0005153!8.34e-08!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.63e-07;1!UBERON:0005056;1.63e-07;1!UBERON:0004176;1.63e-07;1!UBERON:0002171;4.46e-07;1!UBERON:0001764;4.46e-07;1!UBERON:0001825;4.46e-07;1!UBERON:0006518;4.46e-07;1!UBERON:0008949;4.46e-07;1!UBERON:0000101;4.46e-07;1!UBERON:0002167;4.46e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.85e-07,1;UBERON:0005056,1.85e-07,1;UBERON:0001764,2.67e-07,1;UBERON:0001825,2.67e-07,1;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1 | |||
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| ||
|short_description=p@chr16:68867685..68867705,+ | |short_description=p@chr16:68867685..68867705,+ | ||
}} | }} |
Latest revision as of 11:47, 25 July 2015
Short description: | p@chr16:68867685..68867705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68867685..68867705, + |
Coexpression cluster: | C2385_breast_choriocarcinoma_squamous_pancreatic_malignant_mesothelioma_bronchioalveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.09e-08 | 58 |
germ line cell | 4.67e-08 | 7 |
germ cell | 4.67e-08 | 7 |
epithelial cell | 1.16e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.85e-07 | 1 |
external female genitalia | 1.85e-07 | 1 |
maxillary sinus | 2.67e-07 | 1 |
paranasal sinus | 2.67e-07 | 1 |
lower lobe of right lung | 3.62e-07 | 1 |
right lung lobe | 3.62e-07 | 1 |
lower lobe of lung | 3.62e-07 | 1 |
lobe of lung | 3.62e-07 | 1 |
right lung | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.22e-16 | 106 |
cell type cancer | 6.58e-14 | 143 |
squamous cell carcinoma | 1.37e-10 | 14 |
cancer | 1.41e-09 | 235 |
disease of cellular proliferation | 2.82e-09 | 239 |
islet cell tumor | 1.20e-07 | 1 |
endocrine pancreas cancer | 1.20e-07 | 1 |
pancreatic endocrine carcinoma | 1.20e-07 | 1 |
cystadenocarcinoma | 1.97e-07 | 1 |
mucinous cystadenocarcinoma | 1.97e-07 | 1 |
paranasal sinus cancer | 2.67e-07 | 1 |
maxillary sinus cancer | 2.67e-07 | 1 |