FFCP PHASE1:Hg19::chr16:66429426..66429432,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1003 | |EntrezGene=1003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |HGNC=1764 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTR2 | |UniProt=B4DTR2 | ||
|association_with_transcript=68bp_to_ENST00000539168_5end | |association_with_transcript=68bp_to_ENST00000539168_5end | ||
|cluster_id=chr16:66429426..66429432,+ | |||
|description=CAGE_peak_8_at_CDH5_5end | |description=CAGE_peak_8_at_CDH5_5end | ||
|id=chr16:66429426..66429432,+ | |id=chr16:66429426..66429432,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.13e-24!24;CL:0000115!2.88e-16!35;CL:0000071!5.08e-15!18;CL:0002546!5.08e-15!18;CL:0002078!7.12e-13!44;CL:0005020!2.01e-11!6;CL:0002138!2.01e-11!6;CL:0005022!2.01e-11!6;CL:0000213!1.28e-09!57;CL:0000215!1.28e-09!57;CL:1000413!1.90e-09!9 | |ontology_enrichment_celltype=CL:0002139!4.13e-24!24;CL:0000115!2.88e-16!35;CL:0000071!5.08e-15!18;CL:0002546!5.08e-15!18;CL:0002078!7.12e-13!44;CL:0005020!2.01e-11!6;CL:0002138!2.01e-11!6;CL:0005022!2.01e-11!6;CL:0000213!1.28e-09!57;CL:0000215!1.28e-09!57;CL:1000413!1.90e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.08e-57;24!CL:0002138;4.90e-35;6!CL:0000115;2.45e-32;36!CL:0000071;7.79e-29;18!CL:0002078;2.25e-19;45!CL:0000213;2.28e-16;58!CL:0000215;2.28e-16;58!CL:1000413;5.95e-15;9!CL:0002144;1.21e-12;3!CL:0002618;3.37e-12;3!CL:0000511;1.48e-09;1!CL:0002625;1.48e-09;1!CL:0000216;1.48e-09;1!CL:0000076;1.45e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.92e-57,24;CL:0000115,3.82e-37,36;CL:0005020,3.00e-35,6;CL:0002138,3.00e-35,6;CL:0005022,3.00e-35,6;CL:0002078,2.78e-29,45;CL:0000071,1.09e-28,18;CL:0002546,1.09e-28,18;CL:0000213,6.32e-26,58;CL:0000215,6.32e-26,58;CL:1000413,8.88e-15,9;CL:0002144,1.29e-12,3;CL:0002618,2.85e-12,3;CL:0000222,3.75e-11,121;CL:0000511,8.91e-10,1;CL:0002625,8.91e-10,1;CL:0000216,8.91e-10,1;CL:0000076,1.87e-09,63 | |||
|ontology_enrichment_development_v019=CL:0005022;4.90e-35;6!CL:0002546;7.79e-29;18!UBERON:0005425;1.48e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.30e-10;1!DOID:10165;5.30e-10;1!DOID:1798;5.30e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.79e-10,1;DOID:10165,5.79e-10,1;DOID:1798,5.79e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-26!115;UBERON:0000477!1.48e-18!286;UBERON:0000025!1.51e-16!194;UBERON:0004111!1.96e-16!241;UBERON:0001049!5.00e-16!57;UBERON:0005068!5.00e-16!57;UBERON:0006241!5.00e-16!57;UBERON:0007135!5.00e-16!57;UBERON:0001986!5.08e-15!18;UBERON:0004638!5.08e-15!18;UBERON:0004852!5.08e-15!18;UBERON:0002616!1.01e-13!59;UBERON:0000487!1.13e-13!22;UBERON:0006914!3.81e-13!25;UBERON:0003075!2.76e-12!86;UBERON:0007284!2.76e-12!86;UBERON:0003080!3.99e-12!42;UBERON:0001017!4.83e-12!82;UBERON:0005743!6.03e-12!86;UBERON:0000955!2.42e-11!69;UBERON:0006238!2.42e-11!69;UBERON:0002346!2.50e-11!90;UBERON:0002780!3.66e-11!41;UBERON:0001890!3.66e-11!41;UBERON:0006240!3.66e-11!41;UBERON:0000073!6.62e-11!94;UBERON:0001016!6.62e-11!94;UBERON:0000119!1.21e-10!312;UBERON:0002020!1.43e-10!34;UBERON:0003528!1.43e-10!34;UBERON:0000483!1.90e-10!309;UBERON:0001893!2.83e-10!34;UBERON:0000055!3.92e-10!69;UBERON:0001009!4.83e-10!113;UBERON:0002791!1.41e-09!33;UBERON:0002049!1.82e-09!79;UBERON:0007798!1.82e-09!79;UBERON:0003915!1.90e-09!9;UBERON:0004700!1.90e-09!9;UBERON:0001917!1.90e-09!9;UBERON:0001869!1.08e-08!32;UBERON:0004535!2.21e-08!110;UBERON:0001473!2.84e-08!8;UBERON:0004536!2.84e-08!8;UBERON:0006558!2.84e-08!8;UBERON:0003056!3.11e-08!61;UBERON:0004872!4.52e-08!84;UBERON:0002308!1.81e-07!9;UBERON:0000125!1.81e-07!9;UBERON:0002619!8.70e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.63e-29;22!UBERON:0004638;7.79e-29;18!UBERON:0001986;7.79e-29;18!UBERON:0004852;7.79e-29;18!UBERON:0001473;2.81e-26;8!UBERON:0004536;2.81e-26;8!UBERON:0006558;2.81e-26;8!UBERON:0006914;7.96e-26;25!UBERON:0002465;5.17e-21;10!UBERON:0000490;1.21e-16;33!UBERON:0003915;5.95e-15;9!UBERON:0004700;5.95e-15;9!UBERON:0001917;5.95e-15;9!UBERON:0010523;1.21e-12;3!UBERON:0001915;1.21e-12;3!UBERON:0001982;1.21e-12;3!UBERON:0000055;1.96e-11;65!UBERON:0007029;1.48e-09;1!UBERON:0001136;1.48e-09;1!UBERON:0000941;1.48e-09;1!UBERON:0001301;1.48e-09;1!UBERON:0001343;1.48e-09;1!UBERON:0002171;1.48e-09;1!UBERON:0001785;1.48e-09;1!UBERON:0002464;1.48e-09;1!UBERON:0004904;1.48e-09;1!UBERON:0002426;1.48e-09;1!UBERON:0003831;1.48e-09;1!UBERON:0003898;1.48e-09;1!UBERON:0004830;1.48e-09;1!UBERON:0001021;1.48e-09;1!UBERON:0006518;1.48e-09;1!UBERON:0008949;1.48e-09;1!UBERON:0003830;1.48e-09;1!UBERON:0005175;1.48e-09;1!UBERON:0001774;1.48e-09;1!UBERON:0004910;1.48e-09;1!UBERON:0000101;1.48e-09;1!UBERON:0004813;1.48e-09;1!UBERON:0001103;1.48e-09;1!UBERON:0002167;1.48e-09;1!UBERON:0005904;3.73e-09;4!UBERON:0002049;9.18e-08;75!UBERON:0007798;9.18e-08;75!UBERON:0002405;1.10e-07;27!UBERON:0002066;1.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.81e-29,22;UBERON:0004638,1.09e-28,18;UBERON:0001986,1.09e-28,18;UBERON:0004852,1.09e-28,18;UBERON:0001473,1.95e-26,8;UBERON:0004536,1.95e-26,8;UBERON:0006558,1.95e-26,8;UBERON:0006914,8.73e-26,25;UBERON:0002465,3.87e-21,10;UBERON:0000055,1.25e-18,68;UBERON:0002049,5.93e-16,78;UBERON:0007798,5.93e-16,78;UBERON:0003915,8.88e-15,9;UBERON:0004700,8.88e-15,9;UBERON:0001917,8.88e-15,9;UBERON:0010523,1.29e-12,3;UBERON:0001915,1.29e-12,3;UBERON:0001982,1.29e-12,3;UBERON:0004535,8.97e-11,109;UBERON:0001009,2.01e-10,112;UBERON:0001136,8.91e-10,1;UBERON:0001343,8.91e-10,1;UBERON:0004910,8.91e-10,1;UBERON:0005154,8.91e-10,1;UBERON:0005295,8.91e-10,1;UBERON:0004813,8.91e-10,1;UBERON:0005297,8.91e-10,1;UBERON:0005294,8.91e-10,1;UBERON:0010141,8.91e-10,1;UBERON:0005891,8.91e-10,1;UBERON:0002426,9.70e-10,1;UBERON:0003831,9.70e-10,1;UBERON:0003898,9.70e-10,1;UBERON:0004830,9.70e-10,1;UBERON:0003830,9.70e-10,1;UBERON:0005175,9.70e-10,1;UBERON:0001774,9.70e-10,1;UBERON:0001103,9.70e-10,1;UBERON:0010084,9.70e-10,1;UBERON:0007029,1.25e-09,1;UBERON:0000941,1.36e-09,1;UBERON:0001785,1.36e-09,1;UBERON:0002464,1.36e-09,1;UBERON:0004904,1.36e-09,1;UBERON:0001021,1.36e-09,1;UBERON:0003902,1.36e-09,1;UBERON:0005425,1.36e-09,1;UBERON:0002171,2.08e-09,1;UBERON:0006518,2.08e-09,1;UBERON:0008949,2.08e-09,1;UBERON:0000101,2.08e-09,1;UBERON:0002167,2.08e-09,1;UBERON:0001301,2.67e-09,1;UBERON:0005904,3.89e-09,4;UBERON:0004111,4.70e-08,240;UBERON:0007500,4.83e-08,59;UBERON:0001981,4.83e-08,59;UBERON:0004537,4.83e-08,59;UBERON:0006965,4.83e-08,59;UBERON:0002066,1.04e-07,5;UBERON:0004872,7.34e-07,83 | |||
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|short_description=p8@CDH5 | |short_description=p8@CDH5 | ||
}} | }} |
Latest revision as of 08:17, 17 September 2015
Short description: | p8@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000539168_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | B4DTR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.92e-57 | 24 |
endothelial cell | 3.82e-37 | 36 |
lymphangioblast | 3.00e-35 | 6 |
endothelial cell of lymphatic vessel | 3.00e-35 | 6 |
vascular lymphangioblast | 3.00e-35 | 6 |
meso-epithelial cell | 2.78e-29 | 45 |
blood vessel endothelial cell | 1.09e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-28 | 18 |
lining cell | 6.32e-26 | 58 |
barrier cell | 6.32e-26 | 58 |
endothelial cell of artery | 8.88e-15 | 9 |
capillary endothelial cell | 1.29e-12 | 3 |
endothelial cell of umbilical vein | 2.85e-12 | 3 |
mesodermal cell | 3.75e-11 | 121 |
androgen binding protein secreting cell | 8.91e-10 | 1 |
seminiferous tubule epithelial cell | 8.91e-10 | 1 |
Sertoli cell | 8.91e-10 | 1 |
squamous epithelial cell | 1.87e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.79e-10 | 1 |
endocrine pancreas cancer | 5.79e-10 | 1 |
pancreatic endocrine carcinoma | 5.79e-10 | 1 |