FFCP PHASE1:Hg19::chr10:34817271..34817287,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:34817271..34817287,-
|short_description=p@chr10:34817271..34817287,-
|description=CAGE_peak_at_chr10:34817271..34817287,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:34817271..34817287,- | |||
|description=CAGE_peak_at_chr10:34817271..34817287,- | |||
|id=chr10:34817271..34817287,- | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-17!180;CL:0000548!1.12e-16!679;CL:0000004!1.12e-16!679;CL:0000255!1.12e-16!679;CL:0000012!3.34e-16!682;CL:0002321!7.57e-13!248;CL:0000220!2.01e-12!246;CL:0000077!2.57e-12!19;CL:0000003!4.68e-11!722;CL:0000066!1.17e-09!254;CL:0000393!1.88e-09!60;CL:0000211!1.88e-09!60;CL:0000680!4.49e-09!57;CL:0000056!4.49e-09!57;CL:0000355!4.49e-09!57;CL:0000187!4.65e-09!54;CL:0000057!7.15e-09!75;CL:0000183!8.33e-08!59;CL:0000222!8.61e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.46e-17;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.93e-17,19;CL:0002321,9.70e-09,250;CL:0000393,5.14e-08,61;CL:0000211,5.14e-08,61;CL:0000222,8.63e-08,121;CL:0000192,5.35e-07,43;CL:0000514,5.35e-07,43;CL:0000066,6.73e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!1.99e-09!29;DOID:2394!1.04e-08!14;DOID:14566!1.34e-08!239;DOID:305!1.50e-08!106;DOID:120!3.63e-08!27;DOID:0050687!9.14e-08!143;DOID:162!3.26e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-12;14!DOID:193;3.21e-12;29!DOID:120;4.17e-10;27 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,8.14e-14,239;DOID:2394,1.27e-12,14;DOID:193,5.11e-12,29;DOID:162,2.56e-11,235;DOID:120,6.45e-10,27;DOID:0050687,7.41e-09,143;DOID:305,8.56e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.74e-09!83;UBERON:0002329!2.74e-09!83;UBERON:0003077!2.74e-09!83;UBERON:0003059!2.74e-09!83;UBERON:0007282!2.74e-09!83;UBERON:0009618!2.74e-09!83;UBERON:0007285!2.74e-09!83;UBERON:0000486!3.53e-08!82;UBERON:0004290!9.20e-08!70;UBERON:0001134!1.08e-07!61;UBERON:0002036!1.08e-07!61;UBERON:0003082!1.08e-07!61;UBERON:0002385!4.37e-07!63;UBERON:0001015!4.37e-07!63;UBERON:0000383!4.37e-07!63;UBERON:0004176!4.40e-07!22;UBERON:0005256!4.61e-07!143;UBERON:0000991!5.73e-07!21;UBERON:0009196!5.73e-07!21;UBERON:0009117!5.73e-07!21;UBERON:0005564!5.73e-07!21;UBERON:0001737!7.60e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;3.59e-09;21!UBERON:0001737;4.42e-09;9!UBERON:0001557;4.42e-09;9!UBERON:0000992;3.06e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-09,9;UBERON:0000991,2.98e-09,21;UBERON:0009196,2.98e-09,21;UBERON:0009117,2.98e-09,21;UBERON:0005564,2.98e-09,21;UBERON:0004176,1.09e-08,22;UBERON:0000992,2.65e-07,13 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.246242116153576,0,0,0,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0,0,0,0.756278537312543,1.99556457716308,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,11.2547803691236,2.86836620748814,0.709336764396714,0.560677600142307,0,0.24666754841716,2.8008993185979,0,0.653847612453835,0.605429710579726,0.576175924479999,0.70296429550139,0,0,0,0.23486899728753,0.161872944368132,0.421352420106746,0.61246251376468,0.737005903870608,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0.30648779579902,0.150238058906597,0.794025282120147,1.4351170855109,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,2.06112432036503,0.37223371266318,1.35021065793013,0.0974370051611986,0.504867548488229,0.368199594569197,0,1.77504796258307,0.604512589365842,0,3.28543450377605,4.09119180886252,6.59650569394709,0.975789649036763,0.132529768321485,0.580969714347592,2.38420426535352,1.26160425437814,1.09493207722749,0,1.92972281457866,1.38134921352481,0.464367928031979,0,1.53798840051797,1.68584690078102,1.44606617930089,1.8749975364507,2.17879444092406,1.18635309555548,0.808987848960987,1.76599318612811,2.69323009862473,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,1.42675371031213,0,0.703702806881416,0.925884451585296,0,0,1.44331342025273,0.579652024875384,1.40890433082986,0,0,0,0,0,0,0,0,0.93733833986777,2.18376766658517,4.82035330624114,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.672786506072164,1.74384027533312,0.7333828582095,0.775630294546667,0,0,3.45719551560332,4.16029747645464,0,0,0,0.428933980974443,1.08524321078289,0.823240336780769,0,0,0,5.12446941001296,0,1.89948683245908,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,0,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0,0,0,0.308419387605311,0.355123450626254,0.492762936082855,0.519254429183621,0,0.483437798366489,3.00759705454927,0.0920809889358963,0.803701137152247,0,0.131124414959424,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0,0.54941678891006,0.165018999841176,0.574265537996172,0,1.6068392984416,0.48335359146061,1.07834031980251,0.921022048356777,2.61889487720608,0.859361958946189,0.290033387828457,1.53407929348982,0.890320356467374,0,0,0.638063562472921,0,1.39453664789186,3.77774816196768,0,1.54016790088044,2.12922412126809,0,0.55597265731176,1.14499909393593,0,0.949138274156178,1.14378116354295,0,0,2.22742273548156,1.56989728039846,4.31693898199955,1.64722217841633,1.29593642580255,1.41527737101321,0,1.26377536871694,0.48763373908959,0.487426979262569,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,1.31535265576129,0,1.31178950409327,0.405820753925408,0,0.281695602532241,1.86434757865267,1.08073945114433,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,8.11862940568796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.18714054040822,0,0,0,0.852408440419239,0,0,0,0,0,16.9189231634817,0,0,0.398495976502139,0,0,1.32949287252801,0,0,0.179736702294654,5.54965641494388,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,1.65471377237555,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0,3.57230614267263,0,0,0.31396051279005,0,0,0,0,0,0,2.53197677433632,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.416024019039416,1.04135843001079,0.195984794828755,0.34823682632161,0,8.42731559110921,0,0,0,0,0,0,10.0040604992128,0,0,0,3.52698809106748,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0.14405479798815,1.61528296235062,0.235694034616795,13.3186121952142,15.376618407913,0,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,2.25054407851027,3.30094647833361,4.15440338029185,0,0,0,0,0,0,0.316801009558219,18.2873086119502,0.575745591958336,0,0,0.25426853765475,1.08599920350743,8.64221491201268,1.63293680054705,2.39460383124975,0.082092520749339,1.87426823963964,0.339936274560377,0,0,0,0,9.92303659729111,0,0.106787412567695,0,0,0,0,0,0.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| ||
|short_description=p@chr10:34817271..34817287,- | |||
}} | }} |
Latest revision as of 13:24, 23 July 2015
Short description: | p@chr10:34817271..34817287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:34817271..34817287, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.93e-17 | 19 |
embryonic cell | 9.70e-09 | 250 |
electrically responsive cell | 5.14e-08 | 61 |
electrically active cell | 5.14e-08 | 61 |
mesodermal cell | 8.63e-08 | 121 |
smooth muscle cell | 5.35e-07 | 43 |
smooth muscle myoblast | 5.35e-07 | 43 |
epithelial cell | 6.73e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.13e-09 | 9 |
gonad | 2.98e-09 | 21 |
indifferent external genitalia | 2.98e-09 | 21 |
indifferent gonad | 2.98e-09 | 21 |
gonad primordium | 2.98e-09 | 21 |
external genitalia | 1.09e-08 | 22 |
female gonad | 2.65e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.14e-14 | 239 |
ovarian cancer | 1.27e-12 | 14 |
reproductive organ cancer | 5.11e-12 | 29 |
cancer | 2.56e-11 | 235 |
female reproductive organ cancer | 6.45e-10 | 27 |
cell type cancer | 7.41e-09 | 143 |
carcinoma | 8.56e-08 | 106 |