FFCP PHASE1:Hg19::chr11:65660519..65660553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65660519..65660553,- | |||
|coexpression_cluster_id=C3190 | |||
|description=CAGE_peak_at_chr11:65660519..65660553,- | |description=CAGE_peak_at_chr11:65660519..65660553,- | ||
|id=chr11:65660519..65660553,- | |id=chr11:65660519..65660553,- | ||
|ontology_enrichment_celltype=CL:0000548!1.08e-28!679;CL:0000004!1.08e-28!679;CL:0000255!1.08e-28!679;CL:0000012!9.62e-28!682;CL:0000144!6.41e-21!625;CL:0002371!7.53e-19!591;CL:0000003!1.14e-17!722;CL:0000063!1.17e-16!578;CL:0000220!4.62e-16!246;CL:0002321!7.64e-16!248;CL:0000066!8.65e-14!254;CL:0000055!1.55e-11!180;CL:0000222!1.87e-10!119;CL:0000076!6.89e-09!62;CL:0000057!9.12e-09!75;CL:0002057!8.10e-07!42;CL:0002620!9.98e-07!23 | |ontology_enrichment_celltype=CL:0000548!1.08e-28!679;CL:0000004!1.08e-28!679;CL:0000255!1.08e-28!679;CL:0000012!9.62e-28!682;CL:0000144!6.41e-21!625;CL:0002371!7.53e-19!591;CL:0000003!1.14e-17!722;CL:0000063!1.17e-16!578;CL:0000220!4.62e-16!246;CL:0002321!7.64e-16!248;CL:0000066!8.65e-14!254;CL:0000055!1.55e-11!180;CL:0000222!1.87e-10!119;CL:0000076!6.89e-09!62;CL:0000057!9.12e-09!75;CL:0002057!8.10e-07!42;CL:0002620!9.98e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-11;33!CL:0002057;1.10e-11;33!CL:0000473;2.28e-07;39!CL:0000234;2.28e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.89e-09,42;CL:0002057,2.89e-09,42;CL:0002321,9.50e-08,250;CL:0000222,1.16e-07,121;CL:0000473,4.21e-07,48;CL:0000234,4.21e-07,48;CL:0000057,4.52e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.42e-10!95;UBERON:0000926!1.96e-08!448;UBERON:0004120!1.96e-08!448;UBERON:0006603!1.96e-08!448;UBERON:0002199!1.57e-07!45;UBERON:0002416!1.57e-07!45;UBERON:0002097!2.17e-07!40;UBERON:0005256!3.38e-07!143;UBERON:0000486!9.28e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.57e-09,99;UBERON:0002199,9.21e-08,46;UBERON:0002416,9.21e-08,46;UBERON:0002204,4.94e-07,167;UBERON:0002097,6.05e-07,41;UBERON:0000926,8.97e-07,315;UBERON:0004120,8.97e-07,315;UBERON:0006603,8.97e-07,315 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,1.0007329835313,0,0,0,2.52687949370732,0,0.491467873003018,3.48900583986214,0,0,0,0.331397375727916,1.34465029290355,1.80808358407193,2.19093027116212,1.95173119516203,0.984968464614303,1.42800483870977,0,0,1.77936752594749,0.87879847716362,0.305653622991805,0.164201178899891,0.236132343941038,0.393364276848904,0,0,0.919421224478927,1.8072355126695,1.10926203050036,0,0,0.293600439334847,0.553995408531877,1.60435557976113,0.434021741431704,0,0,0,1.16318591023652,0.755751887377619,0.242584061187816,3.0215774797739,2.87817521615278,2.16794459626573,4.02769349251011,1.5369642391746,1.89185783910868,3.7922024881028,3.22742341791913,0,3.20011977222428,1.36453075028923,0.449446968890169,3.06083892370903,1.92557416245656,1.27867425159808,1.9791078011203,1.59570926097305,1.27867425159808,7.2552309657146,4.53908179752912,4.9825779919646,6.02996796616184,5.21482918420201,4.12658804939722,1.21079900526674,1.84138817993782,1.26584954976354,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,3.61439152384566,0,1.30361867064741,0.795285947051099,0.973269740605272,0.472674085820339,0.665188192387692,0.263504357079378,0.0654895377488563,1.45718115317017,0.370784442784429,0,0,0.132957960518865,0,0,0,0,1.72046919021225,1.38856200643038,0,1.67799774483962,1.92582629358047,1.04497483268405,0,0,0.33472061276467,0.805658634218294,0.760272105718513,0,0.735326160691737,1.62028389576352,0.446498641420399,0.898117490504679,0.225222960966644,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0.436094052142534,0.993943903390637,1.01304409331664,0.264818361626438,0.860509862246441,2.4826786753885,0,1.06748995729705,0.49333509683432,0,0.404132016209064,0.163461903113459,0,0,0.70296429550139,1.87296046098192,2.2818872861778,3.43731965269142,3.75790395660048,1.94247533241758,2.10676210053373,1.42907919878425,4.79053837515895,0.619954687054593,0,2.22540236350701,0,2.15585442544872,1.68336113954066,5.63033339423839,0,0.438977620880838,1.5324389789951,1.65261864797256,0.567160915800105,2.69084453533293,0.427114777637135,0.423863802319124,0.600182192168805,0.824420233907511,0.515281080091258,0.18611685633159,1.18143432568886,1.26668106709558,1.00973509697646,0.368199594569197,1.61646056818812,1.77504796258307,1.61203357164224,0.847802961552438,0.386521706326594,1.09098448236334,1.14721838155602,0.609868530647977,0,0,0,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0.928735856063958,1.44375896333917,0.118306800039844,0.337169380156203,0,0,0.653638332277218,0,0.539325232640658,0.392442930250692,0.769494313892781,0.738155454624648,4.20725321410337,0,0,0,0,0,0,0.122988438543114,0.686271241194102,1.75600456653801,1.1240175325762,4.72486170334665,1.29623823221941,2.6064664424826,1.03993478527958,1.44331342025273,0.811512834825538,0.117408694235822,0.721832238805369,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.567100388969546,2.4180801129769,1.74380363108377,1.53353071666084,2.46331618947972,0.088048434013226,0.207328115540772,0.288239906833923,0.50496973370552,0.507983154337352,1.52795370223311,0,5.13217338068116,2.57068731758309,0.600686115687835,0.285826432630578,0.224262168690721,0,1.466765716419,0.258543431515556,0,3.381211010224,0.797814349754612,1.04007436911366,1.02882949704857,8.5109479213967,2.93064396917709,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,1.19812427745791,0,2.85273810081437,2.46128221334885,2.67119219315498,1.43248770591916,0,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.167516265334349,2.55175500661265,0,2.99161459204025,0,0.24538298343828,1.00034104211935,0.271265023699736,0.623912584592421,3.56857977594324,0.157702415033935,1.17141414992713,0,0,1.03473071292505,1.99267679560631,0.553107505625109,2.08520674723399,0.587403472388222,0.343143423810856,0,0.431428401637234,0.320182673410333,0.606255142892519,0,0.604780586659361,0.992431231275107,0.153461973288062,0.841980283299221,0.384417447767103,0,0.804269605718038,0,4.1636617326717,1.59805552781814,1.56041596426237,7.2695620085707,3.37010097533882,0.120859449591622,1.80455823272956,2.02578175658972,1.26295892981067,6.00900854422166,1.18011973463482,0.451199612907412,0.693138033939733,2.35304930753057,1.46139224653261,0.844413031143006,2.27466768141793,2.2112181685947,1.29549549661284,3.08454505380579,0,0.501689773854853,1.01950509218015,2.49322802678617,1.11937377361089,0.438519753291869,0,1.28225062558195,0,1.62689197332152,0,0.0915694648183434,0,2.87132768998086,4.55042172225565,0,0.386682873168488,0.924291702687866,0.15350367472613,2.61889487720608,0.322260734604821,0.435050081742686,0.340906509664404,0,0.330569830721956,2.11409074101617,0.255225424989168,0.2023155617111,5.11330104227014,2.20368642781448,0,0.616067160352178,1.06461206063404,0.8699329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| ||
|short_description=p@chr11:65660519..65660553,- | |short_description=p@chr11:65660519..65660553,- | ||
}} | }} |
Latest revision as of 00:52, 24 July 2015
Short description: | p@chr11:65660519..65660553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65660519..65660553, - |
Coexpression cluster: | C3190_papillary_leiomyoma_mesothelioma_meningioma_myxofibrosarcoma_squamous_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.89e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-09 | 42 |
embryonic cell | 9.50e-08 | 250 |
mesodermal cell | 1.16e-07 | 121 |
defensive cell | 4.21e-07 | 48 |
phagocyte | 4.21e-07 | 48 |
fibroblast | 4.52e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.57e-09 | 99 |
integument | 9.21e-08 | 46 |
integumental system | 9.21e-08 | 46 |
musculoskeletal system | 4.94e-07 | 167 |
skin of body | 6.05e-07 | 41 |
mesoderm | 8.97e-07 | 315 |
mesoderm-derived structure | 8.97e-07 | 315 |
presumptive mesoderm | 8.97e-07 | 315 |