FFCP PHASE1:Hg19::chr11:62752220..62752231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9356 | |EntrezGene=9356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10970 | |HGNC=10970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000421062,ENST00000458333_5end | |association_with_transcript=-58bp_to_ENST00000421062,ENST00000458333_5end | ||
|cluster_id=chr11:62752220..62752231,- | |||
|coexpression_cluster_id=C2149 | |||
|description=CAGE_peak_4_at_SLC22A6_5end | |description=CAGE_peak_4_at_SLC22A6_5end | ||
|id=chr11:62752220..62752231,- | |id=chr11:62752220..62752231,- | ||
|ontology_enrichment_celltype=CL:0002575!6.02e-10!2 | |ontology_enrichment_celltype=CL:0002575!6.02e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.34e-40;2!CL:0000669;7.00e-21;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.34e-40,2;CL:0000669,7.00e-21,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.08e-27;3!UBERON:0003057;2.08e-27;3!UBERON:0003056;7.76e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;2.08e-27;3!UBERON:0005174;2.08e-27;3!UBERON:0001137;2.08e-27;3!UBERON:0002360;2.60e-11;2!UBERON:0002148;2.60e-11;2!UBERON:0006331;2.60e-11;2!UBERON:0009662;2.60e-11;2!UBERON:0000094;2.60e-11;2!UBERON:0010743;2.60e-11;2!UBERON:0001897;4.09e-11;2!UBERON:0010225;4.09e-11;2!UBERON:0000988;5.73e-08;3!UBERON:0002114;5.73e-08;2!UBERON:0000489;8.34e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.38e-27,3;UBERON:0005174,2.38e-27,3;UBERON:0001137,2.38e-27,3;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0002148,2.47e-11,2;UBERON:0006331,2.47e-11,2;UBERON:0009662,2.47e-11,2;UBERON:0002360,2.73e-11,2;UBERON:0000094,2.73e-11,2;UBERON:0010743,2.73e-11,2;UBERON:0001897,4.09e-11,2;UBERON:0010225,4.09e-11,2;UBERON:0002114,5.18e-08,2;UBERON:0000988,5.54e-08,3 | |||
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|short_description=p4@SLC22A6 | |short_description=p4@SLC22A6 | ||
}} | }} |
Latest revision as of 22:30, 18 September 2015
Short description: | p4@SLC22A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC22A6_5end |
Coexpression cluster: | C2149_Pericytes_spinal_kidney_cerebral_temporal_duodenum_retina |
Association with transcript: | -58bp_to_ENST00000421062, ENST00000458333_5end |
EntrezGene: | SLC22A6 |
HGNC: | 10970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.34e-40 | 2 |
pericyte cell | 7.00e-21 | 4 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.38e-27 | 3 |
dorsal region element | 2.38e-27 | 3 |
dorsum | 2.38e-27 | 3 |
posterior neural tube | 1.35e-12 | 15 |
chordal neural plate | 1.35e-12 | 15 |
locus ceruleus | 2.47e-11 | 2 |
brainstem nucleus | 2.47e-11 | 2 |
hindbrain nucleus | 2.47e-11 | 2 |
meninx | 2.73e-11 | 2 |
membrane organ | 2.73e-11 | 2 |
meningeal cluster | 2.73e-11 | 2 |
dorsal plus ventral thalamus | 4.09e-11 | 2 |
thalamic complex | 4.09e-11 | 2 |
duodenum | 5.18e-08 | 2 |
pons | 5.54e-08 | 3 |