FFCP PHASE1:Hg19::chr16:31539197..31539245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51327 | |EntrezGene=51327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18075 | |HGNC=18075 | ||
|TSSclassifier=strong | |||
|UniProt=Q549J4,Q9NZD4 | |UniProt=Q549J4,Q9NZD4 | ||
|association_with_transcript=0bp_to_NM_016633,uc002ecj.2_5end | |association_with_transcript=0bp_to_NM_016633,uc002ecj.2_5end | ||
|cluster_id=chr16:31539197..31539245,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_AHSP_5end | |description=CAGE_peak_1_at_AHSP_5end | ||
|id=chr16:31539197..31539245,+ | |id=chr16:31539197..31539245,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.96e-08;2!CL:0000558;1.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.96e-08,2;CL:0000765,1.96e-08,2;CL:0000050,1.96e-08,2;CL:0000038,1.96e-08,2;CL:0000558,1.96e-08,2;CL:0000547,1.96e-08,2;CL:0000549,1.96e-08,2;CL:0000550,1.96e-08,2;CL:0000552,1.96e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!6.69e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.83e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-25!115;UBERON:0000178!1.63e-15!15;UBERON:0000179!1.63e-15!15;UBERON:0000463!1.63e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.46e-18;49!UBERON:0000178;1.13e-17;15!UBERON:0000179;1.13e-17;15!UBERON:0000463;1.13e-17;15!UBERON:0002390;2.95e-10;32!UBERON:0000341;1.14e-07;2!UBERON:0003127;3.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.13e-17,15;UBERON:0000179,1.13e-17,15;UBERON:0000463,1.13e-17,15;UBERON:0000341,1.12e-07,2;UBERON:0003127,3.98e-07,2 | |||
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| ||
|short_description=p1@AHSP | |short_description=p1@AHSP | ||
}} | }} |
Latest revision as of 13:01, 16 September 2015
Short description: | p1@AHSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AHSP_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_NM_016633, uc002ecj.2_5end |
EntrezGene: | AHSP |
HGNC: | 18075 |
UniProt: | Q549J4Q9NZD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.96e-08 | 2 |
erythroblast | 1.96e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.96e-08 | 2 |
erythroid progenitor cell | 1.96e-08 | 2 |
reticulocyte | 1.96e-08 | 2 |
proerythroblast | 1.96e-08 | 2 |
basophilic erythroblast | 1.96e-08 | 2 |
polychromatophilic erythroblast | 1.96e-08 | 2 |
orthochromatic erythroblast | 1.96e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.13e-17 | 15 |
haemolymphatic fluid | 1.13e-17 | 15 |
organism substance | 1.13e-17 | 15 |
throat | 1.12e-07 | 2 |
open tracheal system trachea | 3.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.83e-10 | 8 |