FFCP PHASE1:Hg19::chr16:3014251..3014254,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79412 | |EntrezGene=79412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18797 | |HGNC=18797 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCW0 | |UniProt=Q8NCW0 | ||
|association_with_transcript=34bp_to_NM_001253725,NM_001253726,NM_024507,NM_172229,uc002csg.2,uc002csh.2,uc002csi.2,uc010bsw.1,uc010bsx.2,uc010uwl.1_5end | |association_with_transcript=34bp_to_NM_001253725,NM_001253726,NM_024507,NM_172229,uc002csg.2,uc002csh.2,uc002csi.2,uc010bsw.1,uc010bsx.2,uc010uwl.1_5end | ||
|cluster_id=chr16:3014251..3014254,+ | |||
|description=CAGE_peak_3_at_KREMEN2_5end | |description=CAGE_peak_3_at_KREMEN2_5end | ||
|id=chr16:3014251..3014254,+ | |id=chr16:3014251..3014254,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.31e-13!254;CL:0000076!1.14e-07!62;CL:0000575!2.47e-07!2;CL:0002076!8.03e-07!43 | |ontology_enrichment_celltype=CL:0000066!7.31e-13!254;CL:0000076!1.14e-07!62;CL:0000575!2.47e-07!2;CL:0002076!8.03e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000575;3.52e-50;2!CL:0002327;6.30e-26;4!CL:0002159;1.93e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.74e-50,2;CL:0002327,7.14e-26,4;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.55e-98;1 | |||
|ontology_enrichment_disease=DOID:305!1.49e-10!106;DOID:162!3.32e-10!235;DOID:14566!8.82e-10!239;DOID:0050687!2.59e-09!143;DOID:1749!1.01e-08!14;DOID:5409!6.13e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.30e-26;4!DOID:1612;6.30e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.14e-26,4;DOID:1612,7.14e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0000065!7.85e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.30e-26;4!UBERON:0000964;6.30e-26;4!UBERON:0010409;6.30e-26;4!UBERON:0000310;2.87e-11;10!UBERON:0010313;2.87e-11;10!UBERON:0001443;2.27e-10;11!UBERON:0001801;1.93e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,5.56e-26,4;UBERON:0010409,5.56e-26,4;UBERON:0004348,5.56e-26,4;UBERON:0005427,5.56e-26,4;UBERON:0001911,7.14e-26,4;UBERON:0005333,7.14e-26,4;UBERON:0008425,7.14e-26,4;UBERON:0005311,7.14e-26,4;UBERON:0005085,5.04e-14,31;UBERON:0000076,1.07e-13,8;UBERON:0010313,2.73e-11,10;UBERON:0002342,2.73e-11,10;UBERON:0005062,2.73e-11,10;UBERON:0000310,3.02e-11,10;UBERON:0001443,2.37e-10,11;UBERON:0005157,1.08e-09,47;UBERON:0001801,1.86e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,1.04951999995435,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.261177619741208,0,0.343972064943233,0.0967563312890851,0,0,0,0.353024506766001,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,1.04951999995435,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.261177619741208,0,0.343972064943233,0.0967563312890851,0,0,0,0.353024506766001,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@KREMEN2 | |short_description=p3@KREMEN2 | ||
}} | }} |
Latest revision as of 06:51, 16 September 2015
Short description: | p3@KREMEN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KREMEN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_NM_001253725, NM_001253726, NM_024507, NM_172229, uc002csg.2, uc002csh.2, uc002csi.2, uc010bsw.1, uc010bsx.2, uc010uwl.1_5end |
EntrezGene: | KREMEN2 |
HGNC: | 18797 |
UniProt: | Q8NCW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.74e-50 | 2 |
mammary gland epithelial cell | 7.14e-26 | 4 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
cornea | 5.56e-26 | 4 |
eye surface | 5.56e-26 | 4 |
optic eminence | 5.56e-26 | 4 |
corneal primordium | 5.56e-26 | 4 |
mammary gland | 7.14e-26 | 4 |
mammary bud | 7.14e-26 | 4 |
mammary ridge | 7.14e-26 | 4 |
mammary placode | 7.14e-26 | 4 |
ectodermal placode | 5.04e-14 | 31 |
external ectoderm | 1.07e-13 | 8 |
neural crest-derived structure | 2.73e-11 | 10 |
neural crest | 2.73e-11 | 10 |
neural fold | 2.73e-11 | 10 |
breast | 3.02e-11 | 10 |
chest | 2.37e-10 | 11 |
epithelial fold | 1.08e-09 | 47 |
anterior segment of eyeball | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.14e-26 | 4 |
breast cancer | 7.14e-26 | 4 |