FFCP PHASE1:Hg19::chr11:61099384..61099393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1642 | |EntrezGene=1642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2717 | |HGNC=2717 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI0 | |UniProt=F5GWI0 | ||
|association_with_transcript=464bp_to_ENST00000535283_5end | |association_with_transcript=464bp_to_ENST00000535283_5end | ||
|cluster_id=chr11:61099384..61099393,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_30_at_DDB1_5end | |description=CAGE_peak_30_at_DDB1_5end | ||
|id=chr11:61099384..61099393,- | |id=chr11:61099384..61099393,- | ||
|ontology_enrichment_celltype=CL:0000039!5.16e-09!7;CL:0000586!5.16e-09!7 | |ontology_enrichment_celltype=CL:0000039!5.16e-09!7;CL:0000586!5.16e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000746;8.70e-18;3!CL:0000737;1.06e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,8.00e-18,3;CL:0000513,8.00e-18,3;CL:0000737,1.00e-13,4 | |||
|ontology_enrichment_development_v019=CL:0000513;8.70e-18;3!UBERON:0003056;8.70e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!6.02e-30!2;UBERON:0002757!6.02e-30!2;UBERON:0010134!6.02e-30!2;UBERON:0002784!6.02e-30!2;UBERON:0005408!6.02e-30!2;UBERON:0001899!6.02e-30!2;UBERON:0003296!1.66e-15!4;UBERON:0010133!1.66e-15!4;UBERON:0002038!1.78e-15!1;UBERON:0009661!1.78e-15!1;UBERON:0002363!3.66e-15!1;UBERON:0007647!3.66e-15!1;UBERON:0010115!3.66e-15!1;UBERON:0001894!2.92e-09!7;UBERON:0006222!2.92e-09!7;UBERON:0003124!4.95e-09!7;UBERON:0002950!2.15e-08!2;UBERON:0001891!2.15e-08!2;UBERON:0009616!2.15e-08!2;UBERON:0002360!3.08e-08!2;UBERON:0000094!3.08e-08!2;UBERON:0007645!3.08e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0002784;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0000966;3.10e-11;5!UBERON:0005388;3.10e-11;5!UBERON:0001802;3.10e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0002784,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0003056,4.50e-08,61;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p30@DDB1 | |short_description=p30@DDB1 | ||
}} | }} |
Latest revision as of 15:29, 18 September 2015
Short description: | p30@DDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_DDB1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 464bp_to_ENST00000535283_5end |
EntrezGene: | DDB1 |
HGNC: | 2717 |
UniProt: | F5GWI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 8.00e-18 | 3 |
cardiac muscle myoblast | 8.00e-18 | 3 |
striated muscle cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
regional part of diencephalon | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
pre-chordal neural plate | 4.50e-08 | 61 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |