FFCP PHASE1:Hg19::chr11:58874174..58874212,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58874174..58874212,- | |||
|description=CAGE_peak_at_chr11:58874174..58874212,- | |description=CAGE_peak_at_chr11:58874174..58874212,- | ||
|id=chr11:58874174..58874212,- | |id=chr11:58874174..58874212,- | ||
|ontology_enrichment_celltype=CL:0000945!2.45e-15!24;CL:0000826!2.45e-15!24;CL:0000236!1.03e-09!14;CL:0000542!5.12e-07!53;CL:0000051!5.12e-07!53 | |ontology_enrichment_celltype=CL:0000945!2.45e-15!24;CL:0000826!2.45e-15!24;CL:0000236!1.03e-09!14;CL:0000542!5.12e-07!53;CL:0000051!5.12e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.23e-25;13!CL:0000945;3.06e-25;24!CL:0000542;1.04e-10;53!CL:0002032;4.31e-07;1!CL:0000557;4.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.16e-30,14;CL:0000945,3.51e-25,24;CL:0000826,3.51e-25,24;CL:0000542,2.08e-14,53;CL:0000051,2.08e-14,53;CL:0000838,1.56e-12,52;CL:0002087,3.34e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.04e-10;53 | |||
|ontology_enrichment_disease=DOID:162!9.25e-13!235;DOID:14566!1.93e-12!239;DOID:305!7.30e-11!106;DOID:0050687!1.38e-10!143 | |ontology_enrichment_disease=DOID:162!9.25e-13!235;DOID:14566!1.93e-12!239;DOID:305!7.30e-11!106;DOID:0050687!1.38e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.81e-07;7!DOID:3904;1.81e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.49e-07,7;DOID:3904,1.49e-07,7;DOID:0060085,7.19e-07,1;DOID:3165,7.19e-07,1;DOID:0060121,7.19e-07,1;DOID:2438,7.19e-07,1;DOID:4418,7.19e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;6.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,7.46e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.376627918784408,0.993374274723366,0.985207073399349,0.865818594450472,0,0,0,0,0,0,0.852139206383318,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,5.27988733383968,1.63841583378639,1.77901850772711,0.853460445133014,2.00197993518006,4.02326707968138,1.32208974556972,2.86216126360609,1.1384259382189,0,0.764546456250458,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0.822189523018381,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0.464775771478074,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,2.37061319387782,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0.507983154337352,0.381988425558278,0,0,0.719792448923265,0,0,0,0,0.4400297149257,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.560425719967636,0,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0.348631135379878,0.362578348774867,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0,0,0,0,0.824125183365091,0.907604499126468,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,1.35169502361987,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0.500547425135725,0,0,0,0,0,1.4098700508785,0,0,1.69904730449319,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0.63337622438398,0,0.828851746593443,0,0,1.23084805461069,0,0.179736702294654,0,0,0,0,0,0,0,1.99613798001194,0.520855522170466,0.174919999992391,0,0,1.27126825146383,1.65471377237555,0,0,0.520874984799877,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0,0.123563938946503,0.835375596043643,0,0,0,0.182454789215666,1.17398771359254,0,0,0,1.22429104652196,0.126373159256976,0,1.14057010536972,0,0,0.313932918407225,1.19472429772959,0,0,0,0.979923974143776,1.48000651186684,0.17472666824203,0.859930162358083,0,0.0730893170861856,0.0821154570532092,0,0,0,0.411125773940253,1.78843150532691,0,0.977756913674015,0.160317640503067,0.213452994739353,0,0.288180834308212,0.114536596165916,0.857974989309823,0,0.124252535565433,0.707082103850386,0.135904206073614,0.523014231561666,0.101998217636322,0,0,0,6.38732940334862,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0.157566364614447,0.494495150286999,0.337017719270924,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0.566560457600628,0,0,0,0,0,0,0.106787412567695,0,0,0,0,10.1087856656144,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.28984205722165,0.298509605773748,0.233713309847224,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,1.23682402162117,0.578742114812744,0.168942440653073,0,0.345430341731199,0.607719912354764,0,0,0,0,0.655219697692825,0.491545817507439,0.211312123358627,0.39997479170986,0,0,1.13503190713367,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0.212574920101683,0,0,0,0.94634094001504,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0.381382095467167,0.690359926060101,0,0,0,0,0.261906694481422,0.655087670040387,1.18284868973636,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,1.03710588800201,0,0,0,0.472775363535873,0.111231401892069,0,0,0.280272163313789,0,0.431855182437243,0.9555033757741,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.687051635306701,0.487671699929078,0,0,0,0,0.233939463462106,1.59160620129095,0.237840181555137,0.11294608203896,0,3.01925687133347,0,0.218559560503957,0.940634592723046,0,0,0,0,0,0.339854229375634,0.0939839179798536,0,0.299823467774787,0,0,0.481448200135009,0,0,0,0,0,1.30905207102113,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.124149428591716,1.45771421354797,0,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.407016343054873,0.106727345877715,1.9307228228694,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.376627918784408,0.993374274723366,0.985207073399349,0.865818594450472,0,0,0,0,0,0,0.852139206383318,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,5.27988733383968,1.63841583378639,1.77901850772711,0.853460445133014,2.00197993518006,4.02326707968138,1.32208974556972,2.86216126360609,1.1384259382189,0,0.764546456250458,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0.822189523018381,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0.464775771478074,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,2.37061319387782,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0.507983154337352,0.381988425558278,0,0,0.719792448923265,0,0,0,0,0.4400297149257,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.560425719967636,0,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0.348631135379878,0.362578348774867,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0,0,0,0,0.824125183365091,0.907604499126468,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,1.35169502361987,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0.500547425135725,0,0,0,0,0,1.4098700508785,0,0,1.69904730449319,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0.63337622438398,0,0.828851746593443,0,0,1.23084805461069,0,0.179736702294654,0,0,0,0,0,0,0,1.99613798001194,0.520855522170466,0.174919999992391,0,0,1.27126825146383,1.65471377237555,0,0,0.520874984799877,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0,0.123563938946503,0.835375596043643,0,0,0,0.182454789215666,1.17398771359254,0,0,0,1.22429104652196,0.126373159256976,0,1.14057010536972,0,0,0.313932918407225,1.19472429772959,0,0,0,0.979923974143776,1.48000651186684,0.17472666824203,0.859930162358083,0,0.0730893170861856,0.0821154570532092,0,0,0,0.411125773940253,1.78843150532691,0,0.977756913674015,0.160317640503067,0.213452994739353,0,0.288180834308212,0.114536596165916,0.857974989309823,0,0.124252535565433,0.707082103850386,0.135904206073614,0.523014231561666,0.101998217636322,0,0,0,6.38732940334862,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0.157566364614447,0.494495150286999,0.337017719270924,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0.566560457600628,0,0,0,0,0,0,0.106787412567695,0,0,0,0,10.1087856656144,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.28984205722165,0.298509605773748,0.233713309847224,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,1.23682402162117,0.578742114812744,0.168942440653073,0,0.345430341731199,0.607719912354764,0,0,0,0,0.655219697692825,0.491545817507439,0.211312123358627,0.39997479170986,0,0,1.13503190713367,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0.212574920101683,0,0,0,0.94634094001504,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0.381382095467167,0.690359926060101,0,0,0,0,0.261906694481422,0.655087670040387,1.18284868973636,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,1.03710588800201,0,0,0,0.472775363535873,0.111231401892069,0,0,0.280272163313789,0,0.431855182437243,0.9555033757741,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.687051635306701,0.487671699929078,0,0,0,0,0.233939463462106,1.59160620129095,0.237840181555137,0.11294608203896,0,3.01925687133347,0,0.218559560503957,0.940634592723046,0,0,0,0,0,0.339854229375634,0.0939839179798536,0,0.299823467774787,0,0,0.481448200135009,0,0,0,0,0,1.30905207102113,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.124149428591716,1.45771421354797,0,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.407016343054873,0.106727345877715,1.9307228228694,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr11:58874174..58874212,- | |short_description=p@chr11:58874174..58874212,- | ||
}} | }} |
Latest revision as of 23:06, 23 July 2015
Short description: | p@chr11:58874174..58874212, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58874174..58874212, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.16e-30 | 14 |
lymphocyte of B lineage | 3.51e-25 | 24 |
pro-B cell | 3.51e-25 | 24 |
lymphocyte | 2.08e-14 | 53 |
common lymphoid progenitor | 2.08e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.56e-12 | 52 |
nongranular leukocyte | 3.34e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
duodenum | 7.46e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.49e-07 | 7 |
bronchogenic carcinoma | 1.49e-07 | 7 |
organ system benign neoplasm | 7.19e-07 | 1 |
skin benign neoplasm | 7.19e-07 | 1 |
integumentary system benign neoplasm | 7.19e-07 | 1 |
dermis tumor | 7.19e-07 | 1 |
cutaneous fibrous histiocytoma | 7.19e-07 | 1 |