FFCP PHASE1:Mm9::chr8:12947965..12947976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17207 | |EntrezGene=17207 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUF4 | |UniProt=D3YUF4 | ||
|association_with_transcript=12bp_to_ENSMUST00000110871_5end | |association_with_transcript=12bp_to_ENSMUST00000110871_5end | ||
|cluster_id=chr8:12947965..12947976,+ | |||
|description=CAGE_peak_18_at_Mcf2l_5end | |description=CAGE_peak_18_at_Mcf2l_5end | ||
|id=chr8:12947965..12947976,+ | |id=chr8:12947965..12947976,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.28e-16!23;CL:0000337!2.28e-16!23;CL:0000540!9.09e-14!33;CL:0000047!9.09e-14!33;CL:0000031!9.09e-14!33;CL:0000404!9.09e-14!33;CL:0000221!3.41e-13!44;CL:0000133!3.41e-13!44;CL:0002319!1.09e-12!43;CL:0000393!2.60e-10!39;CL:0000211!2.60e-10!39;CL:0000055!1.48e-09!50 | |ontology_enrichment_celltype=CL:0000117!2.28e-16!23;CL:0000337!2.28e-16!23;CL:0000540!9.09e-14!33;CL:0000047!9.09e-14!33;CL:0000031!9.09e-14!33;CL:0000404!9.09e-14!33;CL:0000221!3.41e-13!44;CL:0000133!3.41e-13!44;CL:0002319!1.09e-12!43;CL:0000393!2.60e-10!39;CL:0000211!2.60e-10!39;CL:0000055!1.48e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.43e-28,23;CL:0000337,7.43e-28,23;CL:0000540,5.19e-19,33;CL:0000047,5.19e-19,33;CL:0000031,5.19e-19,33;CL:0000404,5.19e-19,33;CL:0002610,6.33e-18,3;CL:0000393,7.14e-16,39;CL:0000211,7.14e-16,39;CL:0002319,2.89e-14,43;CL:0000221,6.58e-14,44;CL:0000133,6.58e-14,44;CL:0002613,1.20e-08,3;CL:0000120,2.18e-08,3;CL:0002321,3.42e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-28!75;UBERON:0001016!1.17e-28!75;UBERON:0001017!5.60e-28!73;UBERON:0005743!5.60e-28!73;UBERON:0000033!9.26e-27!63;UBERON:0004121!3.91e-26!102;UBERON:0000924!3.91e-26!102;UBERON:0006601!3.91e-26!102;UBERON:0002346!1.44e-24!71;UBERON:0003075!1.44e-24!71;UBERON:0007284!1.44e-24!71;UBERON:0000955!2.56e-24!50;UBERON:0006238!2.56e-24!50;UBERON:0001049!8.08e-24!52;UBERON:0005068!8.08e-24!52;UBERON:0006241!8.08e-24!52;UBERON:0007135!8.08e-24!52;UBERON:0002616!2.33e-23!49;UBERON:0003056!1.46e-20!49;UBERON:0003080!2.82e-18!40;UBERON:0002780!2.08e-17!39;UBERON:0001890!2.08e-17!39;UBERON:0006240!2.08e-17!39;UBERON:0007811!9.90e-16!86;UBERON:0000153!1.08e-13!94;UBERON:0002020!3.20e-13!34;UBERON:0002791!6.95e-11!29;UBERON:0003528!6.95e-11!29;UBERON:0001893!6.95e-11!29;UBERON:0001894!5.65e-08!10;UBERON:0006222!5.65e-08!10;UBERON:0000956!3.16e-07!21;UBERON:0001869!3.16e-07!21;UBERON:0000203!3.16e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!1.17e-28!75;UBERON:0001016!1.17e-28!75;UBERON:0001017!5.60e-28!73;UBERON:0005743!5.60e-28!73;UBERON:0000033!9.26e-27!63;UBERON:0004121!3.91e-26!102;UBERON:0000924!3.91e-26!102;UBERON:0006601!3.91e-26!102;UBERON:0002346!1.44e-24!71;UBERON:0003075!1.44e-24!71;UBERON:0007284!1.44e-24!71;UBERON:0000955!2.56e-24!50;UBERON:0006238!2.56e-24!50;UBERON:0001049!8.08e-24!52;UBERON:0005068!8.08e-24!52;UBERON:0006241!8.08e-24!52;UBERON:0007135!8.08e-24!52;UBERON:0002616!2.33e-23!49;UBERON:0003056!1.46e-20!49;UBERON:0003080!2.82e-18!40;UBERON:0002780!2.08e-17!39;UBERON:0001890!2.08e-17!39;UBERON:0006240!2.08e-17!39;UBERON:0007811!9.90e-16!86;UBERON:0000153!1.08e-13!94;UBERON:0002020!3.20e-13!34;UBERON:0002791!6.95e-11!29;UBERON:0003528!6.95e-11!29;UBERON:0001893!6.95e-11!29;UBERON:0001894!5.65e-08!10;UBERON:0006222!5.65e-08!10;UBERON:0000956!3.16e-07!21;UBERON:0001869!3.16e-07!21;UBERON:0000203!3.16e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.01e-18,54;UBERON:0004684,6.33e-18,3;UBERON:0002275,6.33e-18,3;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002420,1.43e-11,8;UBERON:0007245,1.43e-11,8;UBERON:0010009,1.43e-11,8;UBERON:0010011,1.43e-11,8;UBERON:0000454,1.43e-11,8;UBERON:0001049,2.24e-11,52;UBERON:0005068,2.24e-11,52;UBERON:0006241,2.24e-11,52;UBERON:0007135,2.24e-11,52;UBERON:0000369,4.75e-11,5;UBERON:0002435,4.75e-11,5;UBERON:0000204,4.75e-11,5;UBERON:0010082,4.75e-11,5;UBERON:0002020,1.72e-09,34;UBERON:0002346,5.75e-09,64;UBERON:0003075,5.75e-09,64;UBERON:0007284,5.75e-09,64;UBERON:0002616,1.24e-08,46;UBERON:0000955,2.00e-08,47;UBERON:0006238,2.00e-08,47;UBERON:0002780,3.86e-08,39;UBERON:0001890,3.86e-08,39;UBERON:0006240,3.86e-08,39;UBERON:0003080,6.49e-08,40;UBERON:0010371,1.12e-07,73 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.829516898467821,1.08004750665353,0.841299845405528,1.14260393761521,0,0.734944795289724,0.670918297127655,0,2.20231761998777,1.40456071893706,1.84327839907492,0.791317726381163,1.55528994124096,2.08365348222704,1.11673199600552,0,0.763991238884051,1.47314292736834,0.427115042397309,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.898743836428936,0,1.88481528169297,0.173824320192276,0.255715457330331,1.24672826735736,0.486723789203273,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.340182495756639,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.64096361229084,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,1.16422815404479,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.128050304809739,0.402048282689293,0,0.347652977834566,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0,0.436039249896986,0.376437521661322,0.25384382367503,0.548783918618318,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.829516898467821,1.08004750665353,0.841299845405528,1.14260393761521,0,0.734944795289724,0.670918297127655,0,2.20231761998777,1.40456071893706,1.84327839907492,0.791317726381163,1.55528994124096,2.08365348222704,1.11673199600552,0,0.763991238884051,1.47314292736834,0.427115042397309,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.898743836428936,0,1.88481528169297,0.173824320192276,0.255715457330331,1.24672826735736,0.486723789203273,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.340182495756639,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.64096361229084,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,1.16422815404479,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.128050304809739,0.402048282689293,0,0.347652977834566,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0,0.436039249896986,0.376437521661322,0.25384382367503,0.548783918618318,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p18@Mcf2l | |short_description=p18@Mcf2l | ||
}} | }} |
Latest revision as of 18:14, 1 October 2015
Short description: | p18@Mcf2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Mcf2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 12bp_to_ENSMUST00000110871_5end |
EntrezGene: | Mcf2l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.43e-28 | 23 |
neuroblast (sensu Vertebrata) | 7.43e-28 | 23 |
neuron | 5.19e-19 | 33 |
neuronal stem cell | 5.19e-19 | 33 |
neuroblast | 5.19e-19 | 33 |
electrically signaling cell | 5.19e-19 | 33 |
raphe nuclei neuron | 6.33e-18 | 3 |
electrically responsive cell | 7.14e-16 | 39 |
electrically active cell | 7.14e-16 | 39 |
neural cell | 2.89e-14 | 43 |
ectodermal cell | 6.58e-14 | 44 |
neurectodermal cell | 6.58e-14 | 44 |
striatum neuron | 1.20e-08 | 3 |
granule cell | 2.18e-08 | 3 |
embryonic cell | 3.42e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.01e-18 | 54 |
raphe nuclei | 6.33e-18 | 3 |
reticular formation | 6.33e-18 | 3 |
central nervous system | 1.09e-17 | 73 |
nervous system | 3.61e-17 | 75 |
ectoderm-derived structure | 3.66e-13 | 95 |
ectoderm | 3.66e-13 | 95 |
presumptive ectoderm | 3.66e-13 | 95 |
basal ganglion | 1.43e-11 | 8 |
nuclear complex of neuraxis | 1.43e-11 | 8 |
aggregate regional part of brain | 1.43e-11 | 8 |
collection of basal ganglia | 1.43e-11 | 8 |
cerebral subcortex | 1.43e-11 | 8 |
neural tube | 2.24e-11 | 52 |
neural rod | 2.24e-11 | 52 |
future spinal cord | 2.24e-11 | 52 |
neural keel | 2.24e-11 | 52 |
corpus striatum | 4.75e-11 | 5 |
striatum | 4.75e-11 | 5 |
ventral part of telencephalon | 4.75e-11 | 5 |
future corpus striatum | 4.75e-11 | 5 |
gray matter | 1.72e-09 | 34 |
neurectoderm | 5.75e-09 | 64 |
neural plate | 5.75e-09 | 64 |
presumptive neural plate | 5.75e-09 | 64 |
regional part of brain | 1.24e-08 | 46 |
brain | 2.00e-08 | 47 |
future brain | 2.00e-08 | 47 |
regional part of forebrain | 3.86e-08 | 39 |
forebrain | 3.86e-08 | 39 |
future forebrain | 3.86e-08 | 39 |
anterior neural tube | 6.49e-08 | 40 |
ecto-epithelium | 1.12e-07 | 73 |