FFCP PHASE1:Hg19::chr16:19421885..19421901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYU8 | |UniProt=F5GYU8 | ||
|association_with_transcript=24bp_to_ENST00000541464,uc010vaq.1_5end | |association_with_transcript=24bp_to_ENST00000541464,uc010vaq.1_5end | ||
|cluster_id=chr16:19421885..19421901,+ | |||
|coexpression_cluster_id=C3539 | |||
|description=CAGE_peak_10_at_TMC5_5end | |description=CAGE_peak_10_at_TMC5_5end | ||
|id=chr16:19421885..19421901,+ | |id=chr16:19421885..19421901,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.30e-10!254;CL:0000039!2.85e-09!7;CL:0000586!2.85e-09!7 | |ontology_enrichment_celltype=CL:0000066!5.30e-10!254;CL:0000039!2.85e-09!7;CL:0000586!2.85e-09!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.80e-50;29!UBERON:0006595;1.10e-12;86!UBERON:0001041;6.27e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.87e-27!106;DOID:0050687!3.01e-24!143;DOID:162!2.20e-13!235;DOID:14566!7.35e-13!239;DOID:299!3.33e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-10,106;DOID:0050687,4.03e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0008947!6.44e-27!38;UBERON:0003258!6.44e-27!38;UBERON:0001737!1.33e-24!9;UBERON:0000065!1.77e-23!53;UBERON:0000077!9.65e-20!130;UBERON:0004119!6.67e-19!169;UBERON:0000925!6.67e-19!169;UBERON:0006595!6.67e-19!169;UBERON:0004921!1.31e-18!129;UBERON:0004185!1.31e-18!129;UBERON:0001004!1.74e-18!72;UBERON:0001041!2.32e-18!98;UBERON:0001007!4.64e-18!155;UBERON:0001555!4.64e-18!155;UBERON:0007026!4.64e-18!155;UBERON:0000072!1.19e-16!46;UBERON:0002294!3.13e-13!7;UBERON:0001173!3.13e-13!7;UBERON:0004912!3.13e-13!7;UBERON:0001557!5.19e-13!19;UBERON:0001048!5.99e-11!168;UBERON:0005153!1.18e-10!37;UBERON:0002048!3.02e-10!22;UBERON:0000117!3.02e-10!22;UBERON:0000171!3.02e-10!22;UBERON:0000170!3.02e-10!22;UBERON:0005597!3.02e-10!22;UBERON:0000118!3.02e-10!22;UBERON:0005178!6.73e-09!34;UBERON:0002224!6.73e-09!34;UBERON:0005181!1.45e-08!35;UBERON:0002110!3.97e-08!3;UBERON:0006242!3.97e-08!3;UBERON:0005157!5.40e-08!51;UBERON:0000063!9.27e-08!97;UBERON:0005911!1.01e-07!82;UBERON:0000466!2.96e-07!126;UBERON:0003127!4.76e-07!2;UBERON:0003104!5.00e-07!238;UBERON:0009142!5.00e-07!238;UBERON:0002394!6.24e-07!4;UBERON:0003928!6.24e-07!4;UBERON:0000915!6.70e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.43e-48;9!UBERON:0001557;1.43e-48;9!UBERON:0003127;4.92e-26;2!UBERON:0000072;6.14e-24;37!UBERON:0000065;9.39e-23;44!UBERON:0001004;4.97e-15;65!UBERON:0003126;4.05e-08;7!UBERON:0001005;4.05e-08;7!UBERON:0005178;1.10e-07;34!UBERON:0002224;1.10e-07;34!UBERON:0006562;1.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.56e-48,9;UBERON:0008947,5.98e-38,38;UBERON:0003258,5.98e-38,38;UBERON:0000065,2.37e-26,54;UBERON:0003127,4.08e-26,2;UBERON:0001557,8.05e-23,19;UBERON:0000072,3.30e-20,47;UBERON:0001041,4.73e-19,87;UBERON:0001004,6.88e-19,74;UBERON:0004921,9.09e-19,118;UBERON:0001007,5.47e-15,145;UBERON:0001555,5.47e-15,145;UBERON:0007026,5.47e-15,145;UBERON:0004119,1.97e-13,160;UBERON:0000925,1.97e-13,160;UBERON:0006595,1.97e-13,160;UBERON:0001048,1.14e-09,160;UBERON:0005178,3.18e-09,34;UBERON:0002224,3.18e-09,34;UBERON:0011216,5.24e-09,223;UBERON:0005181,5.87e-09,35;UBERON:0003126,3.84e-08,7;UBERON:0001005,3.84e-08,7 | |||
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| ||
|short_description=p10@TMC5 | |short_description=p10@TMC5 | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p10@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMC5_5end |
Coexpression cluster: | C3539_lung_adenocarcinoma_trachea_gastric_somatostatinoma_Hep2_signet |
Association with transcript: | 24bp_to_ENST00000541464, uc010vaq.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | F5GYU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.56e-48 | 9 |
respiratory primordium | 5.98e-38 | 38 |
endoderm of foregut | 5.98e-38 | 38 |
respiratory tract | 2.37e-26 | 54 |
open tracheal system trachea | 4.08e-26 | 2 |
upper respiratory tract | 8.05e-23 | 19 |
segment of respiratory tract | 3.30e-20 | 47 |
foregut | 4.73e-19 | 87 |
respiratory system | 6.88e-19 | 74 |
subdivision of digestive tract | 9.09e-19 | 118 |
digestive system | 5.47e-15 | 145 |
digestive tract | 5.47e-15 | 145 |
primitive gut | 5.47e-15 | 145 |
endoderm-derived structure | 1.97e-13 | 160 |
endoderm | 1.97e-13 | 160 |
presumptive endoderm | 1.97e-13 | 160 |
primordium | 1.14e-09 | 160 |
thoracic cavity element | 3.18e-09 | 34 |
thoracic cavity | 3.18e-09 | 34 |
organ system subdivision | 5.24e-09 | 223 |
thoracic segment organ | 5.87e-09 | 35 |
trachea | 3.84e-08 | 7 |
respiratory airway | 3.84e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-10 | 106 |
cell type cancer | 4.03e-09 | 143 |