FFCP PHASE1:Hg19::chr11:36218094..36218100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:36218094..36218100,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr11:36218094..36218100,- | |description=CAGE_peak_at_chr11:36218094..36218100,- | ||
|id=chr11:36218094..36218100,- | |id=chr11:36218094..36218100,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;2.87e-53;3!UBERON:0005290;2.87e-53;3!UBERON:0002298;2.72e-27;6!UBERON:0001954;5.69e-21;2!UBERON:0003022;5.69e-21;2!UBERON:0002421;5.69e-21;2!UBERON:0002600;5.69e-21;2!UBERON:0004733;3.14e-14;12!UBERON:0002028;3.14e-14;12!UBERON:0004732;3.22e-13;13!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0000349;3.22e-09;5!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24 | |||
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|short_description=p@chr11:36218094..36218100,- | |short_description=p@chr11:36218094..36218100,- | ||
}} | }} |
Latest revision as of 22:02, 23 July 2015
Short description: | p@chr11:36218094..36218100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:36218094..36218100, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.19e-53 | 3 |
myelencephalon | 2.19e-53 | 3 |
future myelencephalon | 2.19e-53 | 3 |
brainstem | 2.38e-27 | 6 |
Ammon's horn | 6.96e-21 | 2 |
lobe parts of cerebral cortex | 6.96e-21 | 2 |
hippocampal formation | 6.96e-21 | 2 |
limbic lobe | 6.96e-21 | 2 |
segmental subdivision of hindbrain | 2.94e-14 | 12 |
hindbrain | 2.94e-14 | 12 |
presumptive hindbrain | 2.94e-14 | 12 |
segmental subdivision of nervous system | 3.03e-13 | 13 |
posterior neural tube | 1.27e-11 | 15 |
chordal neural plate | 1.27e-11 | 15 |
limbic system | 3.49e-09 | 5 |
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
neural plate | 2.59e-08 | 82 |
presumptive neural plate | 2.59e-08 | 82 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
neurectoderm | 5.87e-08 | 86 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |