FFCP PHASE1:Mm9::chr7:94732458..94732467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108071 | |EntrezGene=108071 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1518 | |||
|TSSclassifier=NA | |||
|UniProt=B7ZMP7,E9QMC2,Q4VA56,B2BH30,Q3UVX5 | |UniProt=B7ZMP7,E9QMC2,Q4VA56,B2BH30,Q3UVX5 | ||
|association_with_transcript=-210bp_to_NM_001081414,NM_001143834,uc009ifp.2,uc009ifr.2,uc009ifs.2_5end | |association_with_transcript=-210bp_to_NM_001081414,NM_001143834,uc009ifp.2,uc009ifr.2,uc009ifs.2_5end | ||
|cluster_id=chr7:94732458..94732467,+ | |||
|description=CAGE_peak_13_at_Grm5_5end | |description=CAGE_peak_13_at_Grm5_5end | ||
|id=chr7:94732458..94732467,+ | |id=chr7:94732458..94732467,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.44e-10!23;CL:0000337!4.44e-10!23;CL:0002612!1.60e-09!3;CL:0002611!8.56e-07!2 | |ontology_enrichment_celltype=CL:0000117!4.44e-10!23;CL:0000337!4.44e-10!23;CL:0002612!1.60e-09!3;CL:0002611!8.56e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.21e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0002611,4.02e-12,2;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.62e-17!12;UBERON:0003057!1.62e-17!12;UBERON:0002240!3.15e-17!6;UBERON:0005174!3.15e-17!6;UBERON:0001137!3.15e-17!6;UBERON:0001948!1.08e-14!5;UBERON:0002315!1.08e-14!5;UBERON:0001049!1.22e-12!52;UBERON:0005068!1.22e-12!52;UBERON:0006241!1.22e-12!52;UBERON:0007135!1.22e-12!52;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002257!1.60e-09!3;UBERON:0002020!5.09e-09!34;UBERON:0001017!5.73e-09!73;UBERON:0005743!5.73e-09!73;UBERON:0000073!1.29e-08!75;UBERON:0001016!1.29e-08!75;UBERON:0002298!2.70e-07!6;UBERON:0002256!8.56e-07!2 | |ontology_enrichment_uberon=UBERON:0003076!1.62e-17!12;UBERON:0003057!1.62e-17!12;UBERON:0002240!3.15e-17!6;UBERON:0005174!3.15e-17!6;UBERON:0001137!3.15e-17!6;UBERON:0001948!1.08e-14!5;UBERON:0002315!1.08e-14!5;UBERON:0001049!1.22e-12!52;UBERON:0005068!1.22e-12!52;UBERON:0006241!1.22e-12!52;UBERON:0007135!1.22e-12!52;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002257!1.60e-09!3;UBERON:0002020!5.09e-09!34;UBERON:0001017!5.73e-09!73;UBERON:0005743!5.73e-09!73;UBERON:0000073!1.29e-08!75;UBERON:0001016!1.29e-08!75;UBERON:0002298!2.70e-07!6;UBERON:0002256!8.56e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.65e-69,5;UBERON:0002315,1.65e-69,5;UBERON:0002257,2.21e-65,3;UBERON:0002240,3.91e-58,6;UBERON:0005174,3.91e-58,6;UBERON:0001137,3.91e-58,6;UBERON:0003076,1.21e-29,12;UBERON:0003057,1.21e-29,12;UBERON:0000489,2.25e-17,21;UBERON:0002256,4.02e-12,2;UBERON:0002020,4.50e-11,34;UBERON:0003103,6.31e-09,43;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0,2.35702868378934,2.84743361598206,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0,2.35702868378934,2.84743361598206,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p13@Grm5 | |short_description=p13@Grm5 | ||
}} | }} |
Latest revision as of 05:02, 27 September 2015
Short description: | p13@Grm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Grm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1518 |
Association with transcript: | -210bp_to_NM_001081414, NM_001143834, uc009ifp.2, uc009ifr.2, uc009ifs.2_5end |
EntrezGene: | Grm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.21e-65 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron of the dorsal spinal cord | 4.02e-12 | 2 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.65e-69 | 5 |
gray matter of spinal cord | 1.65e-69 | 5 |
ventral horn of spinal cord | 2.21e-65 | 3 |
spinal cord | 3.91e-58 | 6 |
dorsal region element | 3.91e-58 | 6 |
dorsum | 3.91e-58 | 6 |
posterior neural tube | 1.21e-29 | 12 |
chordal neural plate | 1.21e-29 | 12 |
cavitated compound organ | 2.25e-17 | 21 |
dorsal horn of spinal cord | 4.02e-12 | 2 |
gray matter | 4.50e-11 | 34 |
compound organ | 6.31e-09 | 43 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |