FFCP PHASE1:Hg19::chr11:3253663..3253670,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116534 | |EntrezGene=116534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30694 | |HGNC=30694 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SM8 | |UniProt=Q86SM8 | ||
|association_with_transcript=-47bp_to_ENST00000389832,ENST00000436689,NM_001039165,uc001lxq.3_5end | |association_with_transcript=-47bp_to_ENST00000389832,ENST00000436689,NM_001039165,uc001lxq.3_5end | ||
|cluster_id=chr11:3253663..3253670,- | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_4_at_MRGPRE_5end | |description=CAGE_peak_4_at_MRGPRE_5end | ||
|id=chr11:3253663..3253670,- | |id=chr11:3253663..3253670,- | ||
|ontology_enrichment_celltype=CL:0002537!2.60e-11!5;CL:0000244!6.32e-07!4;CL:0000731!6.32e-07!4 | |ontology_enrichment_celltype=CL:0002537!2.60e-11!5;CL:0000244!6.32e-07!4;CL:0000731!6.32e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!4.85e-07!1 | |ontology_enrichment_disease=DOID:3112!4.85e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.56e-24!15;UBERON:0003057!2.56e-24!15;UBERON:0002298!1.68e-18!8;UBERON:0000988!2.22e-18!3;UBERON:0004733!2.50e-17!12;UBERON:0002028!2.50e-17!12;UBERON:0007277!2.50e-17!12;UBERON:0001049!8.02e-17!57;UBERON:0005068!8.02e-17!57;UBERON:0006241!8.02e-17!57;UBERON:0007135!8.02e-17!57;UBERON:0004732!5.93e-16!13;UBERON:0000073!1.11e-13!94;UBERON:0001016!1.11e-13!94;UBERON:0005743!1.47e-13!86;UBERON:0002148!1.52e-12!2;UBERON:0009662!1.52e-12!2;UBERON:0001017!2.06e-12!82;UBERON:0007023!2.07e-12!115;UBERON:0003075!5.45e-12!86;UBERON:0007284!5.45e-12!86;UBERON:0002616!1.43e-11!59;UBERON:0002346!2.51e-11!90;UBERON:0000955!4.05e-11!69;UBERON:0006238!4.05e-11!69;UBERON:0002680!1.10e-10!9;UBERON:0001895!1.10e-10!9;UBERON:0010092!1.10e-10!9;UBERON:0004121!1.90e-10!169;UBERON:0000924!4.13e-10!173;UBERON:0006601!4.13e-10!173;UBERON:0002240!4.32e-09!3;UBERON:0001896!5.06e-09!3;UBERON:0005290!5.06e-09!3;UBERON:0010096!5.06e-09!3;UBERON:0006331!1.19e-08!3;UBERON:0000305!3.31e-08!7;UBERON:0007190!2.52e-07!1;UBERON:0004871!3.12e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
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|short_description=p4@MRGPRE | |short_description=p4@MRGPRE | ||
}} | }} |
Latest revision as of 15:39, 17 September 2015
Short description: | p4@MRGPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MRGPRE_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | -47bp_to_ENST00000389832, ENST00000436689, NM_001039165, uc001lxq.3_5end |
EntrezGene: | MRGPRE |
HGNC: | 30694 |
UniProt: | Q86SM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |