FFCP PHASE1:Hg19::chr11:2798772..2798822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3784 | |EntrezGene=3784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6294 | |HGNC=6294 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526095_5end | |association_with_transcript=0bp_to_ENST00000526095_5end | ||
|cluster_id=chr11:2798772..2798822,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_KCNQ1_5end | |description=CAGE_peak_3_at_KCNQ1_5end | ||
|id=chr11:2798772..2798822,+ | |id=chr11:2798772..2798822,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.03e-15!3;CL:0000861!1.03e-15!3;CL:0002537!1.87e-09!5;CL:0000349!1.62e-07!3;CL:0002577!1.62e-07!3;CL:0002586!4.26e-07!3 | |ontology_enrichment_celltype=CL:0002150!1.03e-15!3;CL:0000861!1.03e-15!3;CL:0002537!1.87e-09!5;CL:0000349!1.62e-07!3;CL:0002577!1.62e-07!3;CL:0002586!4.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;4.40e-28;5!CL:0002577;2.28e-21;3!CL:0000349;3.84e-20;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.83e-28,5;CL:0002577,2.67e-21,3;CL:0000349,4.25e-20,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.22e-13;29 | |||
|ontology_enrichment_disease=DOID:305!7.61e-08!106 | |ontology_enrichment_disease=DOID:305!7.61e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.34e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.17e-42!9;UBERON:0001557!3.91e-23!19;UBERON:0005631!7.87e-16!14;UBERON:0000158!7.87e-16!14;UBERON:0001987!3.41e-11!4;UBERON:0004340!3.41e-11!4;UBERON:0003124!7.22e-11!7;UBERON:0000478!7.96e-09!24;UBERON:0008947!1.15e-08!38;UBERON:0003258!1.15e-08!38;UBERON:0000072!2.00e-08!46;UBERON:0004923!1.02e-07!57;UBERON:0001781!4.26e-07!3;UBERON:0001782!4.26e-07!3;UBERON:0005424!4.26e-07!3;UBERON:0000065!4.54e-07!53;UBERON:0000305!7.37e-07!7;UBERON:0000064!9.42e-07!219 | |ontology_enrichment_uberon=UBERON:0001737!7.17e-42!9;UBERON:0001557!3.91e-23!19;UBERON:0005631!7.87e-16!14;UBERON:0000158!7.87e-16!14;UBERON:0001987!3.41e-11!4;UBERON:0004340!3.41e-11!4;UBERON:0003124!7.22e-11!7;UBERON:0000478!7.96e-09!24;UBERON:0008947!1.15e-08!38;UBERON:0003258!1.15e-08!38;UBERON:0000072!2.00e-08!46;UBERON:0004923!1.02e-07!57;UBERON:0001781!4.26e-07!3;UBERON:0001782!4.26e-07!3;UBERON:0005424!4.26e-07!3;UBERON:0000065!4.54e-07!53;UBERON:0000305!7.37e-07!7;UBERON:0000064!9.42e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.75e-42;9!UBERON:0001557;6.75e-42;9!UBERON:0000305;2.82e-20;7!UBERON:0001987;2.74e-16;4!UBERON:0000478;5.75e-16;24!UBERON:0005631;2.13e-14;10!UBERON:0000158;2.13e-14;10!UBERON:0000072;2.65e-10;37!UBERON:0000065;5.22e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.95e-42,9;UBERON:0005631,3.21e-27,14;UBERON:0000158,3.21e-27,14;UBERON:0000305,3.02e-20,7;UBERON:0001557,5.62e-20,19;UBERON:0004871,8.34e-18,8;UBERON:0001987,3.07e-16,4;UBERON:0004340,3.07e-16,4;UBERON:0000478,6.22e-16,24;UBERON:0008947,5.12e-10,38;UBERON:0003258,5.12e-10,38;UBERON:0003124,1.09e-09,7;UBERON:0000072,4.28e-08,47;UBERON:0000065,4.86e-07,54 | |||
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|short_description=p3@KCNQ1 | |short_description=p3@KCNQ1 | ||
}} | }} |
Latest revision as of 12:43, 17 September 2015
Short description: | p3@KCNQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNQ1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000526095_5end |
EntrezGene: | KCNQ1 |
HGNC: | 6294 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.83e-28 | 5 |
placental epithelial cell | 2.67e-21 | 3 |
extraembryonic cell | 4.25e-20 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.95e-42 | 9 |
extraembryonic membrane | 3.21e-27 | 14 |
membranous layer | 3.21e-27 | 14 |
amnion | 3.02e-20 | 7 |
upper respiratory tract | 5.62e-20 | 19 |
somatic layer of lateral plate mesoderm | 8.34e-18 | 8 |
placenta | 3.07e-16 | 4 |
allantois | 3.07e-16 | 4 |
extraembryonic structure | 6.22e-16 | 24 |
respiratory primordium | 5.12e-10 | 38 |
endoderm of foregut | 5.12e-10 | 38 |
chorion | 1.09e-09 | 7 |
segment of respiratory tract | 4.28e-08 | 47 |
respiratory tract | 4.86e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.34e-08 | 106 |