FFCP PHASE1:Hg19::chr11:22688366..22688395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=O43903 | |UniProt=O43903 | ||
|association_with_transcript=205bp_to_ENST00000454584_5end | |association_with_transcript=205bp_to_ENST00000454584_5end | ||
|cluster_id=chr11:22688366..22688395,+ | |||
|description=CAGE_peak_9_at_GAS2_5end | |description=CAGE_peak_9_at_GAS2_5end | ||
|id=chr11:22688366..22688395,+ | |id=chr11:22688366..22688395,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.94e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.10e-08,24;CL:0000826,2.10e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.53e-09;1!UBERON:0005425;3.53e-09;1 | |||
|ontology_enrichment_disease=DOID:1287!8.61e-08!4 | |ontology_enrichment_disease=DOID:1287!8.61e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.92e-33!115;UBERON:0001049!8.35e-29!57;UBERON:0005068!8.35e-29!57;UBERON:0006241!8.35e-29!57;UBERON:0007135!8.35e-29!57;UBERON:0002616!1.06e-23!59;UBERON:0002780!1.15e-23!41;UBERON:0001890!1.15e-23!41;UBERON:0006240!1.15e-23!41;UBERON:0000073!4.03e-23!94;UBERON:0001016!4.03e-23!94;UBERON:0003080!6.33e-23!42;UBERON:0001017!2.84e-20!82;UBERON:0005743!5.54e-20!86;UBERON:0000955!9.55e-20!69;UBERON:0006238!9.55e-20!69;UBERON:0003075!2.45e-19!86;UBERON:0007284!2.45e-19!86;UBERON:0002346!5.32e-18!90;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0001893!1.78e-16!34;UBERON:0002791!3.36e-15!33;UBERON:0000153!6.25e-15!129;UBERON:0007811!6.25e-15!129;UBERON:0003056!1.32e-14!61;UBERON:0001869!2.07e-14!32;UBERON:0004121!2.03e-13!169;UBERON:0002619!2.82e-13!22;UBERON:0000033!3.88e-13!123;UBERON:0001950!5.60e-13!20;UBERON:0000924!8.32e-13!173;UBERON:0006601!8.32e-13!173;UBERON:0000956!2.68e-11!25;UBERON:0000203!2.68e-11!25;UBERON:0002298!3.95e-11!8;UBERON:0001894!1.21e-09!7;UBERON:0006222!1.21e-09!7;UBERON:0000025!4.53e-09!194;UBERON:0004111!2.37e-08!241;UBERON:0000119!1.08e-07!312;UBERON:0000475!1.41e-07!365;UBERON:0000483!1.73e-07!309;UBERON:0002368!2.79e-07!35;UBERON:0000477!3.11e-07!286;UBERON:0001871!3.90e-07!7;UBERON:0003076!4.15e-07!15;UBERON:0003057!4.15e-07!15;UBERON:0000200!4.32e-07!6;UBERON:0002308!4.65e-07!9;UBERON:0000125!4.65e-07!9;UBERON:0001896!7.57e-07!3;UBERON:0005290!7.57e-07!3;UBERON:0010096!7.57e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!6.92e-33!115;UBERON:0001049!8.35e-29!57;UBERON:0005068!8.35e-29!57;UBERON:0006241!8.35e-29!57;UBERON:0007135!8.35e-29!57;UBERON:0002616!1.06e-23!59;UBERON:0002780!1.15e-23!41;UBERON:0001890!1.15e-23!41;UBERON:0006240!1.15e-23!41;UBERON:0000073!4.03e-23!94;UBERON:0001016!4.03e-23!94;UBERON:0003080!6.33e-23!42;UBERON:0001017!2.84e-20!82;UBERON:0005743!5.54e-20!86;UBERON:0000955!9.55e-20!69;UBERON:0006238!9.55e-20!69;UBERON:0003075!2.45e-19!86;UBERON:0007284!2.45e-19!86;UBERON:0002346!5.32e-18!90;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0001893!1.78e-16!34;UBERON:0002791!3.36e-15!33;UBERON:0000153!6.25e-15!129;UBERON:0007811!6.25e-15!129;UBERON:0003056!1.32e-14!61;UBERON:0001869!2.07e-14!32;UBERON:0004121!2.03e-13!169;UBERON:0002619!2.82e-13!22;UBERON:0000033!3.88e-13!123;UBERON:0001950!5.60e-13!20;UBERON:0000924!8.32e-13!173;UBERON:0006601!8.32e-13!173;UBERON:0000956!2.68e-11!25;UBERON:0000203!2.68e-11!25;UBERON:0002298!3.95e-11!8;UBERON:0001894!1.21e-09!7;UBERON:0006222!1.21e-09!7;UBERON:0000025!4.53e-09!194;UBERON:0004111!2.37e-08!241;UBERON:0000119!1.08e-07!312;UBERON:0000475!1.41e-07!365;UBERON:0000483!1.73e-07!309;UBERON:0002368!2.79e-07!35;UBERON:0000477!3.11e-07!286;UBERON:0001871!3.90e-07!7;UBERON:0003076!4.15e-07!15;UBERON:0003057!4.15e-07!15;UBERON:0000200!4.32e-07!6;UBERON:0002308!4.65e-07!9;UBERON:0000125!4.65e-07!9;UBERON:0001896!7.57e-07!3;UBERON:0005290!7.57e-07!3;UBERON:0010096!7.57e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002784;1.83e-18;4!UBERON:0001905;1.23e-16;2!UBERON:0002757;1.23e-16;2!UBERON:0010134;1.23e-16;2!UBERON:0005408;1.23e-16;2!UBERON:0001899;1.23e-16;2!UBERON:0001894;8.52e-11;7!UBERON:0000941;3.53e-09;1!UBERON:0001785;3.53e-09;1!UBERON:0002464;3.53e-09;1!UBERON:0004904;3.53e-09;1!UBERON:0001021;3.53e-09;1!UBERON:0003296;8.88e-09;4!UBERON:0010133;8.88e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.83e-18,4;UBERON:0001905,1.33e-16,2;UBERON:0002757,1.33e-16,2;UBERON:0010134,1.33e-16,2;UBERON:0005408,1.33e-16,2;UBERON:0001899,1.33e-16,2;UBERON:0001894,8.53e-11,7;UBERON:0006222,8.53e-11,7;UBERON:0000941,2.77e-09,1;UBERON:0001785,2.77e-09,1;UBERON:0002464,2.77e-09,1;UBERON:0004904,2.77e-09,1;UBERON:0001021,2.77e-09,1;UBERON:0003902,2.77e-09,1;UBERON:0005425,2.77e-09,1;UBERON:0003296,9.25e-09,4;UBERON:0010133,9.25e-09,4;UBERON:0001049,6.65e-08,56;UBERON:0005068,6.65e-08,56;UBERON:0006241,6.65e-08,56;UBERON:0007135,6.65e-08,56 | |||
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| ||
|short_description=p9@GAS2 | |short_description=p9@GAS2 | ||
}} | }} |
Latest revision as of 09:34, 17 September 2015
Short description: | p9@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENST00000454584_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.10e-08 | 24 |
pro-B cell | 2.10e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 1.83e-18 | 4 |
pineal body | 1.33e-16 | 2 |
regional part of epithalamus | 1.33e-16 | 2 |
secretory circumventricular organ | 1.33e-16 | 2 |
circumventricular organ | 1.33e-16 | 2 |
epithalamus | 1.33e-16 | 2 |
diencephalon | 8.53e-11 | 7 |
future diencephalon | 8.53e-11 | 7 |
cranial nerve II | 2.77e-09 | 1 |
cranial nerve | 2.77e-09 | 1 |
nerve trunk | 2.77e-09 | 1 |
nerve connecting eye with brain | 2.77e-09 | 1 |
nerve | 2.77e-09 | 1 |
retinal neural layer | 2.77e-09 | 1 |
presumptive neural retina | 2.77e-09 | 1 |
gland of diencephalon | 9.25e-09 | 4 |
neuroendocrine gland | 9.25e-09 | 4 |
neural tube | 6.65e-08 | 56 |
neural rod | 6.65e-08 | 56 |
future spinal cord | 6.65e-08 | 56 |
neural keel | 6.65e-08 | 56 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.15e-09 | 1 |