FFCP PHASE1:Hg19::chr11:19734399..19734410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVL1,A7E2D6 | |UniProt=Q8IVL1,A7E2D6 | ||
|association_with_transcript=-470bp_to_ENST00000396085,NM_001244963,NM_145117,NM_182964,uc001mpr.3,uc010rdm.1_5end | |association_with_transcript=-470bp_to_ENST00000396085,NM_001244963,NM_145117,NM_182964,uc001mpr.3,uc010rdm.1_5end | ||
|cluster_id=chr11:19734399..19734410,+ | |||
|coexpression_cluster_id=C3129 | |||
|description=CAGE_peak_4_at_NAV2_5end | |description=CAGE_peak_4_at_NAV2_5end | ||
|id=chr11:19734399..19734410,+ | |id=chr11:19734399..19734410,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.65e-18!180;CL:0000222!8.81e-14!119;CL:0000057!2.62e-10!75;CL:0002139!1.75e-09!24;CL:0000213!5.93e-09!57;CL:0000215!5.93e-09!57;CL:0000115!5.93e-09!35;CL:0002078!6.54e-08!44;CL:0000071!6.83e-07!18;CL:0002546!6.83e-07!18 | |ontology_enrichment_celltype=CL:0000055!9.65e-18!180;CL:0000222!8.81e-14!119;CL:0000057!2.62e-10!75;CL:0002139!1.75e-09!24;CL:0000213!5.93e-09!57;CL:0000215!5.93e-09!57;CL:0000115!5.93e-09!35;CL:0002078!6.54e-08!44;CL:0000071!6.83e-07!18;CL:0002546!6.83e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-11;24!CL:0000115;1.28e-08;36!CL:0000071;2.58e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.19e-11,121;CL:0002139,2.28e-11,24;CL:0000115,3.95e-10,36;CL:0000213,1.29e-08,58;CL:0000215,1.29e-08,58;CL:0000071,3.01e-08,18;CL:0002546,3.01e-08,18;CL:0002078,4.04e-08,45;CL:0000057,3.20e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;2.58e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.86e-28!286;UBERON:0004111!1.01e-27!241;UBERON:0000025!6.90e-27!194;UBERON:0000119!1.73e-24!312;UBERON:0000483!1.52e-23!309;UBERON:0003075!6.08e-17!86;UBERON:0007284!6.08e-17!86;UBERON:0001049!7.07e-17!57;UBERON:0005068!7.07e-17!57;UBERON:0006241!7.07e-17!57;UBERON:0007135!7.07e-17!57;UBERON:0002049!8.85e-16!79;UBERON:0007798!8.85e-16!79;UBERON:0003914!1.78e-15!118;UBERON:0005743!2.41e-15!86;UBERON:0000073!2.83e-15!94;UBERON:0001016!2.83e-15!94;UBERON:0004872!3.17e-15!84;UBERON:0000055!5.27e-15!69;UBERON:0002346!1.48e-14!90;UBERON:0002616!2.22e-14!59;UBERON:0000468!2.24e-14!659;UBERON:0001017!2.42e-14!82;UBERON:0000475!6.38e-14!365;UBERON:0000467!1.64e-13!625;UBERON:0000481!2.66e-13!347;UBERON:0000480!2.92e-13!626;UBERON:0001981!8.09e-13!60;UBERON:0007500!8.09e-13!60;UBERON:0004537!8.09e-13!60;UBERON:0006965!8.09e-13!60;UBERON:0000955!1.63e-12!69;UBERON:0006238!1.63e-12!69;UBERON:0001009!1.81e-12!113;UBERON:0004535!3.50e-12!110;UBERON:0003056!4.70e-12!61;UBERON:0004121!1.39e-11!169;UBERON:0003080!3.03e-11!42;UBERON:0002780!3.45e-11!41;UBERON:0001890!3.45e-11!41;UBERON:0006240!3.45e-11!41;UBERON:0002020!8.52e-11!34;UBERON:0003528!8.52e-11!34;UBERON:0000033!1.76e-10!123;UBERON:0001893!1.92e-10!34;UBERON:0000064!2.57e-10!219;UBERON:0000924!2.71e-10!173;UBERON:0006601!2.71e-10!173;UBERON:0002791!3.45e-10!33;UBERON:0001869!4.15e-10!32;UBERON:0001637!1.27e-09!42;UBERON:0003509!1.27e-09!42;UBERON:0004572!1.27e-09!42;UBERON:0000153!3.80e-09!129;UBERON:0007811!3.80e-09!129;UBERON:0007023!6.44e-09!115;UBERON:0002050!1.44e-08!605;UBERON:0005423!1.44e-08!605;UBERON:0000956!1.52e-08!25;UBERON:0000203!1.52e-08!25;UBERON:0004573!2.07e-08!33;UBERON:0004571!2.07e-08!33;UBERON:0000923!2.33e-08!604;UBERON:0005291!2.33e-08!604;UBERON:0006598!2.33e-08!604;UBERON:0002532!2.33e-08!604;UBERON:0000922!4.59e-08!612;UBERON:0000487!5.67e-08!22;UBERON:0002619!2.50e-07!22;UBERON:0003076!3.79e-07!15;UBERON:0003057!3.79e-07!15;UBERON:0001950!4.10e-07!20;UBERON:0001986!6.83e-07!18;UBERON:0004638!6.83e-07!18;UBERON:0004852!6.83e-07!18;UBERON:0006914!6.94e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.70e-10;34!UBERON:0002020;5.70e-10;34!UBERON:0001869;1.00e-09;32!UBERON:0001893;1.11e-09;34!UBERON:0000487;1.51e-09;22!UBERON:0002791;1.62e-09;32!UBERON:0000073;2.99e-09;53!UBERON:0002616;2.99e-09;53!UBERON:0000956;3.85e-09;25!UBERON:0000203;3.85e-09;25!UBERON:0001637;5.43e-09;42!UBERON:0003509;5.43e-09;42!UBERON:0004572;5.43e-09;42!UBERON:0000055;1.24e-08;65!UBERON:0003914;1.77e-08;74!UBERON:0002780;1.94e-08;41!UBERON:0001890;1.94e-08;41!UBERON:0004638;2.58e-08;18!UBERON:0001986;2.58e-08;18!UBERON:0004852;2.58e-08;18!UBERON:0004573;3.07e-08;33!UBERON:0004571;3.07e-08;33!UBERON:0006914;3.68e-08;25!UBERON:0002049;6.72e-08;75!UBERON:0007798;6.72e-08;75!UBERON:0007500;8.17e-08;56!UBERON:0001981;8.17e-08;56!UBERON:0004537;8.17e-08;56!UBERON:0002619;1.07e-07;22!UBERON:0001950;1.47e-07;20 | |||
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| ||
|short_description=p4@NAV2 | |short_description=p4@NAV2 | ||
}} | }} |
Latest revision as of 05:16, 17 September 2015
Short description: | p4@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NAV2_5end |
Coexpression cluster: | C3129_Melanocyte_melanoma_occipital_brain_parietal_aorta_Fibroblast |
Association with transcript: | -470bp_to_ENST00000396085, NM_001244963, NM_145117, NM_182964, uc001mpr.3, uc010rdm.1_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | Q8IVL1A7E2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.19e-11 | 121 |
endothelial cell of vascular tree | 2.28e-11 | 24 |
endothelial cell | 3.95e-10 | 36 |
lining cell | 1.29e-08 | 58 |
barrier cell | 1.29e-08 | 58 |
blood vessel endothelial cell | 3.01e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-08 | 18 |
meso-epithelial cell | 4.04e-08 | 45 |
fibroblast | 3.20e-07 | 76 |