FFCP PHASE1:Hg19::chr10:125960330..125960338,-: Difference between revisions
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|id=chr10:125960330..125960338,-
|short_description=p@chr10:125960330..125960338,-
|description=CAGE_peak_at_chr10:125960330..125960338,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:125960330..125960338,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:125960330..125960338,- | |||
|id=chr10:125960330..125960338,- | |||
|ontology_enrichment_celltype=CL:0002057!1.15e-130!42;CL:0000860!1.34e-121!45;CL:0002194!6.67e-84!63;CL:0000576!6.67e-84!63;CL:0000040!6.67e-84!63;CL:0000559!6.67e-84!63;CL:0002009!3.40e-81!65;CL:0000839!4.28e-75!70;CL:0000557!5.63e-74!71;CL:0000766!1.78e-73!76;CL:0000763!2.66e-48!112;CL:0000049!2.66e-48!112;CL:0002087!3.77e-45!119;CL:0002031!2.89e-40!124;CL:0000738!3.26e-40!140;CL:0000037!1.01e-31!172;CL:0000566!1.01e-31!172;CL:0002032!4.47e-31!165;CL:0000837!4.47e-31!165;CL:0000988!1.13e-29!182;CL:0000134!3.10e-12!358;CL:0002320!6.93e-12!365;CL:0000219!1.19e-10!390;CL:0000048!3.58e-09!430;CL:0000723!5.81e-09!436;CL:0000034!1.09e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-128;33!CL:0002057;1.13e-128;33!CL:0000473;2.93e-91;39!CL:0000234;2.93e-91;39!CL:0000576;2.24e-62;48!CL:0000766;1.96e-32;69!CL:0000763;2.48e-17;100!CL:0002087;7.00e-17;104!CL:0000738;1.07e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.81e-115,42;CL:0002057,5.81e-115,42;CL:0000473,3.56e-100,48;CL:0000234,3.56e-100,48;CL:0002194,1.83e-79,59;CL:0000576,1.83e-79,59;CL:0000040,1.83e-79,59;CL:0000559,1.83e-79,59;CL:0002009,8.64e-77,61;CL:0000839,8.37e-71,66;CL:0000557,1.03e-69,67;CL:0000766,1.06e-64,72;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0002087,2.07e-39,115;CL:0002031,1.24e-37,120;CL:0000738,8.11e-33,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-84;42!CL:0000049;2.58e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.78e-65!80;UBERON:0001474!2.81e-60!86;UBERON:0002390!1.59e-53!102;UBERON:0003061!1.59e-53!102;UBERON:0004765!1.33e-50!101;UBERON:0001434!1.33e-50!101;UBERON:0002193!2.70e-48!112;UBERON:0002405!8.00e-44!115;UBERON:0002204!1.62e-28!167;UBERON:0003081!2.04e-22!216;UBERON:0002384!2.08e-11!375;UBERON:0000926!1.49e-08!448;UBERON:0004120!1.49e-08!448;UBERON:0006603!1.49e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.69e-61,76;UBERON:0001474,1.74e-56,82;UBERON:0004765,3.26e-51,90;UBERON:0002405,1.82e-49,93;UBERON:0002390,8.64e-47,98;UBERON:0003061,8.64e-47,98;UBERON:0001434,8.57e-46,100;UBERON:0002193,3.59e-42,108;UBERON:0002204,4.36e-26,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002384,1.15e-09,371 | |||
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|short_description=p@chr10:125960330..125960338,- | |||
}} | }} |
Latest revision as of 11:19, 23 July 2015
Short description: | p@chr10:125960330..125960338, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125960330..125960338, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.81e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-115 | 42 |
defensive cell | 3.56e-100 | 48 |
phagocyte | 3.56e-100 | 48 |
monopoietic cell | 1.83e-79 | 59 |
monocyte | 1.83e-79 | 59 |
monoblast | 1.83e-79 | 59 |
promonocyte | 1.83e-79 | 59 |
macrophage dendritic cell progenitor | 8.64e-77 | 61 |
myeloid lineage restricted progenitor cell | 8.37e-71 | 66 |
granulocyte monocyte progenitor cell | 1.03e-69 | 67 |
myeloid leukocyte | 1.06e-64 | 72 |
myeloid cell | 3.59e-42 | 108 |
common myeloid progenitor | 3.59e-42 | 108 |
nongranular leukocyte | 2.07e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-37 | 120 |
leukocyte | 8.11e-33 | 136 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.69e-61 | 76 |
bone element | 1.74e-56 | 82 |
skeletal element | 3.26e-51 | 90 |
immune system | 1.82e-49 | 93 |
hematopoietic system | 8.64e-47 | 98 |
blood island | 8.64e-47 | 98 |
skeletal system | 8.57e-46 | 100 |
hemolymphoid system | 3.59e-42 | 108 |
musculoskeletal system | 4.36e-26 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
connective tissue | 1.15e-09 | 371 |