FFCP PHASE1:Hg19::chr10:124907645..124907660,+: Difference between revisions
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|id=chr10:124907645..124907660,+
|short_description=p1@HMX2
|description=CAGE_peak_1_at_HMX2_5end
|association_with_transcript=7bp_to_ENST00000339992,NM_005519,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3167 | |EntrezGene=3167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5018 | |HGNC=5018 | ||
|TSSclassifier=strong | |||
|UniProt=A2RU54 | |UniProt=A2RU54 | ||
|association_with_transcript=7bp_to_ENST00000339992,NM_005519,uc001lhc.1_5end | |||
|cluster_id=chr10:124907645..124907660,+ | |||
|coexpression_cluster_id=C488 | |||
|description=CAGE_peak_1_at_HMX2_5end | |||
|id=chr10:124907645..124907660,+ | |||
|ontology_enrichment_celltype=CL:0002535!1.54e-08!2;CL:0002322!1.64e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.70e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!1.37e-07!5;DOID:162!2.60e-07!235;DOID:0050686!3.34e-07!137;DOID:14566!5.04e-07!239;DOID:8692!7.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:630;3.45e-21;1!DOID:0050177;3.45e-21;1!DOID:0050427;3.45e-21;1!DOID:3347;6.31e-21;1!DOID:4362;8.14e-17;5!DOID:8692;1.31e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.45e-21,1;DOID:0050177,3.45e-21,1;DOID:0050427,3.45e-21,1;DOID:3347,5.16e-21,1;DOID:4362,8.14e-17,5;DOID:8692,1.07e-10,31;DOID:1240,1.43e-08,39;DOID:0050686,8.37e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0006955!1.54e-08!2;UBERON:0004801!1.54e-08!2;UBERON:0000013!2.97e-07!5;UBERON:0002410!2.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;3.48e-14;6!UBERON:0001560;3.48e-14;6!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.48e-14,6;UBERON:0001560,3.48e-14,6;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2 | |||
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| ||
|short_description=p1@HMX2 | |||
}} | }} |
Latest revision as of 21:07, 16 September 2015
Short description: | p1@HMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMX2_5end |
Coexpression cluster: | C488_biphenotypic_acute_skeletal_hippocampus_Monocytederived_diaphragm_small |
Association with transcript: | 7bp_to_ENST00000339992, NM_005519, uc001lhc.1_5end |
EntrezGene: | HMX2 |
HGNC: | 5018 |
UniProt: | A2RU54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 3.48e-14 | 6 |
neck of organ | 3.48e-14 | 6 |
uterine epithelium | 3.70e-11 | 2 |
cervix epithelium | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.45e-21 | 1 |
monogenic disease | 3.45e-21 | 1 |
xeroderma pigmentosum | 3.45e-21 | 1 |
osteosarcoma | 5.16e-21 | 1 |
cervical cancer | 8.14e-17 | 5 |
myeloid leukemia | 1.07e-10 | 31 |
leukemia | 1.43e-08 | 39 |
organ system cancer | 8.37e-07 | 137 |