FFCP PHASE1:Hg19::chr15:79290919..79290969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:79290919..79290969,+ | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr15:79290919..79290969,+ | |description=CAGE_peak_at_chr15:79290919..79290969,+ | ||
|id=chr15:79290919..79290969,+ | |id=chr15:79290919..79290969,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.85e-12;3!CL:0002178;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.85e-12,3;CL:0002178,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.48e-18;2 | |||
|ontology_enrichment_disease=DOID:3910!9.25e-08!2;DOID:3493!1.28e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;5.48e-18;2!DOID:3493;9.86e-18;2!DOID:3908;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.48e-18,2;DOID:3493,1.27e-17,2;DOID:3908,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001301!3.50e-14!1;UBERON:0002171!6.65e-14!1;UBERON:0006518!6.65e-14!1;UBERON:0008949!6.65e-14!1;UBERON:0000101!6.65e-14!1;UBERON:0002167!6.65e-14!1;UBERON:0006834!9.73e-14!1;UBERON:0003135!5.51e-11!11;UBERON:0003133!5.14e-09!48;UBERON:0004903!9.25e-08!2;UBERON:0002173!9.25e-08!2;UBERON:0002186!9.25e-08!2;UBERON:0007023!9.53e-08!115;UBERON:0000007!1.12e-07!2;UBERON:0005156!2.89e-07!59;UBERON:0000990!2.89e-07!59;UBERON:0000473!3.05e-07!8;UBERON:0000466!5.23e-07!126;UBERON:0000464!6.73e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.58e-34;1!UBERON:0004903;5.48e-18;2!UBERON:0002173;5.48e-18;2!UBERON:0002186;5.48e-18;2!UBERON:0000007;9.86e-18;2!UBERON:0000058;2.49e-14;10!UBERON:0003135;4.95e-13;11!UBERON:0004821;1.85e-12;3!UBERON:0007499;1.85e-12;3!UBERON:0003215;1.85e-12;3!UBERON:0010368;1.85e-12;3!UBERON:0009911;1.85e-12;3!UBERON:0002299;1.85e-12;3!UBERON:0006524;1.85e-12;3!UBERON:0008874;1.85e-12;3!UBERON:0002169;1.85e-12;3!UBERON:0004894;1.85e-12;3!UBERON:0006947;2.07e-12;3!UBERON:0004054;2.07e-12;3!UBERON:0009856;1.12e-09;4!UBERON:0005904;1.22e-09;4!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.58e-34,1;UBERON:0004903,5.48e-18,2;UBERON:0002173,5.48e-18,2;UBERON:0002186,5.48e-18,2;UBERON:0000007,9.07e-18,2;UBERON:0003135,4.52e-13,11;UBERON:0004821,1.85e-12,3;UBERON:0003215,1.85e-12,3;UBERON:0010368,1.85e-12,3;UBERON:0009911,1.85e-12,3;UBERON:0002299,1.85e-12,3;UBERON:0006524,1.85e-12,3;UBERON:0008874,1.85e-12,3;UBERON:0002169,1.85e-12,3;UBERON:0004894,1.85e-12,3;UBERON:0006947,2.07e-12,3;UBERON:0004054,2.07e-12,3;UBERON:0005904,1.22e-09,4;UBERON:0003296,1.44e-09,4;UBERON:0010133,1.44e-09,4;UBERON:0000058,5.16e-08,19;UBERON:0003101,5.09e-07,22;UBERON:0000079,5.09e-07,22 | |||
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|short_description=p@chr15:79290919..79290969,+ | |short_description=p@chr15:79290919..79290969,+ | ||
}} | }} |
Latest revision as of 04:39, 25 July 2015
Short description: | p@chr15:79290919..79290969, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:79290919..79290969, + |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.85e-12 | 3 |
epithelial cell of stomach | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.58e-34 | 1 |
bronchoalveolar duct junction | 5.48e-18 | 2 |
alveolar duct | 5.48e-18 | 2 |
bronchiole | 5.48e-18 | 2 |
pituitary gland | 9.07e-18 | 2 |
male reproductive organ | 4.52e-13 | 11 |
pulmonary alveolus epithelium | 1.85e-12 | 3 |
alveolus | 1.85e-12 | 3 |
pulmonary lobule | 1.85e-12 | 3 |
lobule | 1.85e-12 | 3 |
alveolus of lung | 1.85e-12 | 3 |
alveolar system | 1.85e-12 | 3 |
pulmonary acinus | 1.85e-12 | 3 |
alveolar sac | 1.85e-12 | 3 |
alveolar wall | 1.85e-12 | 3 |
male genital duct | 2.07e-12 | 3 |
internal male genitalia | 2.07e-12 | 3 |
duct of male reproductive system | 1.22e-09 | 4 |
gland of diencephalon | 1.44e-09 | 4 |
neuroendocrine gland | 1.44e-09 | 4 |
duct | 5.16e-08 | 19 |
male organism | 5.09e-07 | 22 |
male reproductive system | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.48e-18 | 2 |
signet ring cell adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 5.35e-08 | 5 |