FFCP PHASE1:Hg19::chr15:75248569..75248592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54913 | |EntrezGene=54913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30361 | |HGNC=30361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=333bp_to_CU675593,HQ448197_5end | |association_with_transcript=333bp_to_CU675593,HQ448197_5end | ||
|cluster_id=chr15:75248569..75248592,- | |||
|description=CAGE_peak_6_at_RPP25_5end | |description=CAGE_peak_6_at_RPP25_5end | ||
|id=chr15:75248569..75248592,- | |id=chr15:75248569..75248592,- | ||
|ontology_enrichment_celltype=CL:0002494!2.01e-11!16;CL:0000148!3.93e-08!10;CL:0000541!3.93e-08!10;CL:0000147!2.41e-07!14 | |ontology_enrichment_celltype=CL:0002494!2.01e-11!16;CL:0000148!3.93e-08!10;CL:0000541!3.93e-08!10;CL:0000147!2.41e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002494;9.91e-28;16!CL:0002567;7.30e-16;3!CL:0000148;4.91e-12;10!CL:0000569;2.45e-11;4!CL:0002195;3.16e-10;2!CL:0002571;3.16e-10;2!CL:0000147;1.65e-08;14!CL:0002548;1.06e-07;6!CL:0000746;2.42e-07;3!CL:0002504;4.32e-07;3!CL:1000279;4.32e-07;3!CL:0002592;4.32e-07;3!CL:1000280;4.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,7.67e-28,16;CL:0002567,7.56e-16,3;CL:0000148,5.24e-12,10;CL:0000541,5.24e-12,10;CL:0000569,1.56e-11,4;CL:0000011,1.56e-11,4;CL:0002195,4.21e-10,2;CL:0002571,4.21e-10,2;CL:0000147,1.72e-08,14;CL:0002548,1.06e-07,6;CL:0000746,2.18e-07,3;CL:0000513,2.18e-07,3;CL:0002592,5.38e-07,3;CL:0002504,6.47e-07,3;CL:1000279,6.47e-07,3;CL:1000280,6.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;2.45e-11;4!CL:0000513;2.42e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.16e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.06e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000948!4.11e-08!24;UBERON:0005498!4.11e-08!24;UBERON:0004140!4.11e-08!24;UBERON:0009881!4.11e-08!24;UBERON:0004141!4.11e-08!24;UBERON:0003084!4.11e-08!24;UBERON:0007005!4.11e-08!24;UBERON:0004139!4.11e-08!24;UBERON:0004291!4.11e-08!24;UBERON:0000025!5.95e-08!194;UBERON:0000119!1.12e-07!312;UBERON:0000483!1.29e-07!309;UBERON:0007100!1.53e-07!27;UBERON:0000477!3.21e-07!286;UBERON:0001737!5.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.20e-19;22!UBERON:0007100;4.62e-17;25!UBERON:0001737;2.17e-08;9!UBERON:0001557;2.17e-08;9!UBERON:0003498;4.32e-07;3!UBERON:0005985;4.32e-07;3!UBERON:0001621;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,6.33e-18,24;UBERON:0005498,6.33e-18,24;UBERON:0004140,6.33e-18,24;UBERON:0009881,6.33e-18,24;UBERON:0004141,6.33e-18,24;UBERON:0003084,6.33e-18,24;UBERON:0007005,6.33e-18,24;UBERON:0004139,6.33e-18,24;UBERON:0004291,6.33e-18,24;UBERON:0007100,1.01e-15,27;UBERON:0001737,2.51e-08,9;UBERON:0003103,1.45e-07,68;UBERON:0001048,3.47e-07,160;UBERON:0001621,5.38e-07,3;UBERON:0003914,8.78e-07,117 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0.354668382198357,1.68203280042692,1.06748995729705,0,3.7345324247972,0.404132016209064,0.817309515567294,0.908144565869588,0,0,2.18512053781224,0,0.298897361103602,0,0,0.140450806702248,0.61246251376468,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0.300476117813194,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.265059536642971,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,0,0.721879481669586,1.0647612003586,1.34867752062481,0.241011029883482,0.441175890929576,1.74303555273925,0.474541238222193,1.34831308160164,0.588664395376038,0.769494313892781,1.4763109092493,0,0.8231480226628,8.82052268313252,0,0,0,0,0.860919069801795,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.63497894292169,4.96584953225761,2.34434894420094,3.4214489204541,1.23392991243988,0.901029173531752,1.42913216315289,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,0,0,0,0,0,1.42977993658148,8.13932408087165,0.823240336780769,0,1.06617584622764,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0.303127571446259,0,0,0,0,0,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0.571890581771475,0.255897791311334,0.855877976067841,0.318203247925937,0,0.539617372749944,1.37268514868027,1.06031162111118,1.01091240786658,1.58510321173008,0.842516912477962,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0.75894634753143,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,1.92495971052672,0.245040215981032,0.185803175125719,0,0,0,0,0,0.423347165447766,0.649243880549111,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,1.93866549219044,1.02044907978036,0,0,0.349839999984783,0.724999575434793,0.455173793141999,0.762760950878299,0.709163045303809,0.344743373241465,0,0,0.885741385813839,0,0,0,0.295547618953547,0.658156191461918,1.41620002574687,0,0,0.341826167541004,0.69169171316418,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,1.08194319871046,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.489961987071888,0.522355239482415,0.17472666824203,0,0.483781656445426,0.438535902517113,0.574808199372465,0,0,0.677942222341597,0,0.19871461170299,0.569797163602908,0.391102765469606,0.240476460754601,1.49417096317547,0.19980960958213,0.576361668616424,0.114536596165916,0.171594997861965,0.720273989940749,0.49701014226173,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.425246896606173,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,1.19271615249795,0.113312091520126,0.146552233678082,0,1.0342636508924,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.332787154610557,0.434674820589684,0,0,1.81978941049977,1.7127920012698,0.470531639396343,0,0.28984205722165,0.149254802886874,0.934853239388898,0.554805861502613,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| ||
|short_description=p6@RPP25 | |short_description=p6@RPP25 | ||
}} | }} |
Latest revision as of 02:21, 19 September 2015
Short description: | p6@RPP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RPP25_5end |
Coexpression cluster: | NA |
Association with transcript: | 333bp_to_CU675593, HQ448197_5end |
EntrezGene: | RPP25 |
HGNC: | 30361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 7.67e-28 | 16 |
light melanocyte | 7.56e-16 | 3 |
melanocyte | 5.24e-12 | 10 |
melanoblast | 5.24e-12 | 10 |
cardiac mesenchymal cell | 1.56e-11 | 4 |
migratory trunk neural crest cell | 1.56e-11 | 4 |
hepatic stem cell | 4.21e-10 | 2 |
hepatic mesenchymal stem cell | 4.21e-10 | 2 |
pigment cell | 1.72e-08 | 14 |
cardiac fibroblast | 1.06e-07 | 6 |
cardiac muscle cell | 2.18e-07 | 3 |
cardiac muscle myoblast | 2.18e-07 | 3 |
smooth muscle cell of the coronary artery | 5.38e-07 | 3 |
enteric smooth muscle cell | 6.47e-07 | 3 |
smooth muscle cell of large intestine | 6.47e-07 | 3 |
smooth muscle cell of colon | 6.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart | 6.33e-18 | 24 |
primitive heart tube | 6.33e-18 | 24 |
primary heart field | 6.33e-18 | 24 |
anterior lateral plate mesoderm | 6.33e-18 | 24 |
heart tube | 6.33e-18 | 24 |
heart primordium | 6.33e-18 | 24 |
cardiac mesoderm | 6.33e-18 | 24 |
cardiogenic plate | 6.33e-18 | 24 |
heart rudiment | 6.33e-18 | 24 |
primary circulatory organ | 1.01e-15 | 27 |
larynx | 2.51e-08 | 9 |
compound organ | 1.45e-07 | 68 |
primordium | 3.47e-07 | 160 |
coronary artery | 5.38e-07 | 3 |
epithelial tube | 8.78e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.06e-10 | 2 |