FFCP PHASE1:Mm9::chr7:28271965..28271979,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55942 | |EntrezGene=55942 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2291 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JL10 | |UniProt=Q9JL10 | ||
|association_with_transcript=0bp_to_NM_018820,uc009fwh.1_5end | |association_with_transcript=0bp_to_NM_018820,uc009fwh.1_5end | ||
|cluster_id=chr7:28271965..28271979,+ | |||
|description=CAGE_peak_1_at_Sertad1_5end | |description=CAGE_peak_1_at_Sertad1_5end | ||
|id=chr7:28271965..28271979,+ | |id=chr7:28271965..28271979,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.64e-18!66;CL:0000219!8.16e-13!54;CL:0002320!5.20e-10!46;CL:0000134!5.20e-10!46;CL:0000144!1.19e-08!121;CL:0000012!1.19e-08!121;CL:0000988!2.48e-08!32;CL:0002032!2.48e-08!32;CL:0000037!2.48e-08!32;CL:0000566!2.48e-08!32;CL:0000837!2.48e-08!32;CL:0002371!2.02e-07!118;CL:0000066!5.27e-07!25 | |ontology_enrichment_celltype=CL:0000063!2.64e-18!66;CL:0000219!8.16e-13!54;CL:0002320!5.20e-10!46;CL:0000134!5.20e-10!46;CL:0000144!1.19e-08!121;CL:0000012!1.19e-08!121;CL:0000988!2.48e-08!32;CL:0002032!2.48e-08!32;CL:0000037!2.48e-08!32;CL:0000566!2.48e-08!32;CL:0000837!2.48e-08!32;CL:0002371!2.02e-07!118;CL:0000066!5.27e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,8.16e-13,54;CL:0002320,5.20e-10,46;CL:0000134,5.20e-10,46;CL:0000988,2.48e-08,32;CL:0002032,2.48e-08,32;CL:0000037,2.48e-08,32;CL:0000837,2.48e-08,32;CL:0000066,5.27e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.20e-10!46;UBERON:0000344!1.14e-07!15;UBERON:0001242!5.69e-07!13;UBERON:0000060!5.69e-07!13;UBERON:0001262!5.69e-07!13;UBERON:0004786!5.69e-07!13;UBERON:0004923!6.02e-07!24;UBERON:0002204!9.14e-07!32 | |ontology_enrichment_uberon=UBERON:0002384!5.20e-10!46;UBERON:0000344!1.14e-07!15;UBERON:0001242!5.69e-07!13;UBERON:0000060!5.69e-07!13;UBERON:0001262!5.69e-07!13;UBERON:0004786!5.69e-07!13;UBERON:0004923!6.02e-07!24;UBERON:0002204!9.14e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.20e-10,46;UBERON:0000344,1.14e-07,15;UBERON:0001242,5.69e-07,13;UBERON:0001262,5.69e-07,13;UBERON:0004786,5.69e-07,13;UBERON:0004923,6.02e-07,24;UBERON:0002204,9.14e-07,32 | |||
|phase1_expression=47.8845052843334,251.611268907979,222.494628061483,143.972964582051,169.803652451812,102.238476594341,97.8836964095253,61.3335786347487,244.409221655293,315.518981482047,38.8664787871896,29.3561545102838,54.6130328480546,55.5119555360633,12.3250611871795,31.1811911780332,20.2872944657163,33.4389895279732,30.439404260474,28.434106670468,17.3488311908182,15.9858431433425,17.2391860831697,50.2376207571297,67.2169193526808,233.138177430698,176.181656429062,156.863057395327,93.8715692114487,84.6821235993367,113.747751966171,57.1527606113668,54.1257013074422,31.6963362030877,37.2618589479144,17.9533416987172,52.2673552031665,104.632907684227,102.354930132618,69.1051342045414,128.822695878792,119.532959867728,116.522484727477,52.3730762778401,49.6746962975621,30.1016673545158,93.8869613217647,33.5758740825888,52.7246838562732,55.2180913370965,43.1158178606117,56.0635001023389,99.4950853922377,169.009379088643,138.470645246695,63.285821264843,35.5301465524058,51.5672092277442,2.22548106945558,3.1739458756322,3.80298842103708,92.8434017869422,73.8114680772246,86.840322717655,111.741898970068,99.467216092454,52.4300193407208,70.696168179166,2.07379224616955,2.43010688997043,1.47227472945967,3.14216082844184,14.7981922437581,2.20483438586917,2.20444583341944,2.75765635983006,3.30347642998166,4.59674417106676,5.37622866396852,2.63772575460388,2.28719109006024,0.52091337055676,7.2587579740359,6.75315132038016,5.50073691996516,6.48182888042069,6.54909731675874,3.72798891650601,81.481384026506,40.2040699768099,186.672730723881,16.3480536626463,58.4775346988665,4.31762553310254,5.19821133958135,8.96053774194671,20.5048853392358,58.4576006442738,73.7792253072147,66.427840007944,67.6048414928066,37.2146784501522,22.9324715735981,42.6640021891999,71.0090614516782,67.9004439473264,68.7513245220105,28.7743376892031,29.5189187357776,28.0555642832519,22.0326364992993,29.2286859179656,17.7573932887165,22.9098413639986,11.4061045921634,18.975655290781,51.4165532887498,26.4616823163438,26.5383165584962,16.985519244478,15.9005893291483,14.5462575940567,46.5979403045305,12.0040126774734,16.7557365450764,53.6459815938042,108.432687677858,113.981518888747,77.0045576062772,5.99162557619291,15.0975198930147,3.26701315493447,18.0777292999968,12.2743419518559,5.61027720310812,5.67844420737152,16.1924588522003,15.5508713262616,14.1524744722858,10.7325346502102,9.10843100738926,9.65588838620586,7.74267158163002,12.0563854268572,5.78310242786287,6.53379973452734,5.90320864726292,11.3829483125167,10.1316956678436,10.7790465695657,14.4279921814438,21.2619860454748,16.1267404550847,31.6909471535172,31.0731025975995,14.7285357445685,73.7323846678896,53.0136688656313,40.3512169141742,18.2270679831242,15.7132460187334,17.1058958387964,19.8865577891577,17.7087808572663,16.9693824176116,22.0907247512887,24.1446061259657,10.3921154706781,15.7977455916941,14.9392392311977,16.9433811950838,23.8305979503292,18.6617597997393,15.5679445762031,11.565947171027,2.6755199218614,64.7620814648244,36.2297276329056,12.5840067815788,15.5598570146494,15.206360436007,14.5212137728807,16.9007313322101,28.3436182907713,41.2840283543725,33.9279846731462,26.3901969240283,27.4559931416788,32.1690743746548,42.2445122067484,32.2045694313294,40.6248197438909,19.1564579962612,15.994791765362,13.5249282807697,18.3286195060783,20.9468686141036,13.1855341393799,16.8209188750524,16.8275568696746,15.8568715119789,19.8669433914099,16.3048944897932,16.017130148745,20.6386944868863,19.7878658898671,27.1832562660594,30.1471449690521,54.4899322812238,38.5512824184086,8.59316701907687,21.6903516418584,12.9391385874619,18.2349064357567,16.2259590019572,15.912469310668,8.96987067609561,11.0962009913574,49.3291017744834,17.4332098828846,14.8298128562244,17.8232340063948,23.4690248288502,33.3337452309213,44.7522044865706,41.3683333458534,29.4777719478577,31.0050565508285,27.4262202090878,32.6087996284319,26.2481172436161,28.3512154819763,55.7927750575307,44.6002660731342,17.7035138286853,16.2802680319792,6.90367536947505,5.15731421005694,70.0002216758404,15.9056684138755,18.6149849455591,16.0079885161622,17.0184484208911,19.3564726341567,21.8342700600746,18.6830510320629,17.8116708736954,21.0424217696145,24.1125544547379,15.7447445046685,19.4457916735328,24.0388564950795,13.6825045857004,25.570369060743,3.98235415019888,13.352934988524,11.4882951646605,11.6935149448657,15.651000322681,22.1353306519628,25.3259727304857,10.9060118843252,11.4079161083111,8.84902922220285,6.32511651449993,9.28219889233682,20.7668159509811,10.0834212657534,10.7367707539686,12.0028739617692,9.57637261668277,10.167022603318,12.6702745863633,17.6589670486468,24.6405293466896,33.6812992673474,24.9197089802107,82.44312647074,30.3553122188302,26.7789386681012,53.0013207373926,63.3583873015936,30.8969686827642,6.11903496634682,21.7006018613273,24.3536504196603,26.1124283591293,24.2995309536051,14.7629765938707,20.8188137617936,220.801980562018,243.375575590841,178.69256612912,55.3708958448766,13.91878371757,14.6390016331331,18.7929293029934,21.9542710815192,36.903273273104,24.2755823492677,25.7878781863048,36.3840759357801,32.6629732695318,8.69875038321696,12.9649375897364,11.2137409532984,16.876766026624,15.3616438791798,18.4698547573155,15.20605129417,11.8530811032212,15.754730566118,23.5933524957849,16.1861360953424,9.79302021276743,20.8567339614598,12.1635129174099,12.0171819882848,7.66532855568991,11.2786818270513,16.8879151564075,14.3032584928763,12.9966783913628,12.5198397935703,11.12619377163,14.6197968448419,19.3941182672107,17.0294959703383,20.336580979593,37.8639740637403,14.4290869693142,13.9953616310782,20.3140385800535,18.7393906211225,29.2784661703844,21.6118916635373,37.7288347179156,21.0660283694853,10.7302850097243,9.20650473014354,12.6037012956667,13.0608418581203,16.4419804744954,9.06472676867641,17.550585006027,16.2115633160719,35.345107900768,20.7104124700728,10.1711600632493,15.1629451892392,14.8538237006097,14.3432963070293,20.9613162627982,29.2311178435522,25.7806204249874,20.3974706666505,18.9342333659171,19.2049880940486,23.0666162900118,17.9195024316772,18.0728109416873,17.0306905396952,18.6665274105743,19.528041342606,16.4555742841695,13.8894638733868,21.0163809409686,18.1054671765309,22.286501405052,17.3926290036151,14.7830437767339,17.2962235792471,16.4691415726829,18.7844429519522,18.47572526015,16.3103221091463,16.703906003041,23.567975409625,17.3207126461294,14.4801589092078,15.9600106836179,13.479505183179,19.2906610981141,22.2331414364772,19.1823918925235,19.7681369724434,18.363679878609,28.0151102281785,26.432933260728 | |phase1_expression=47.8845052843334,251.611268907979,222.494628061483,143.972964582051,169.803652451812,102.238476594341,97.8836964095253,61.3335786347487,244.409221655293,315.518981482047,38.8664787871896,29.3561545102838,54.6130328480546,55.5119555360633,12.3250611871795,31.1811911780332,20.2872944657163,33.4389895279732,30.439404260474,28.434106670468,17.3488311908182,15.9858431433425,17.2391860831697,50.2376207571297,67.2169193526808,233.138177430698,176.181656429062,156.863057395327,93.8715692114487,84.6821235993367,113.747751966171,57.1527606113668,54.1257013074422,31.6963362030877,37.2618589479144,17.9533416987172,52.2673552031665,104.632907684227,102.354930132618,69.1051342045414,128.822695878792,119.532959867728,116.522484727477,52.3730762778401,49.6746962975621,30.1016673545158,93.8869613217647,33.5758740825888,52.7246838562732,55.2180913370965,43.1158178606117,56.0635001023389,99.4950853922377,169.009379088643,138.470645246695,63.285821264843,35.5301465524058,51.5672092277442,2.22548106945558,3.1739458756322,3.80298842103708,92.8434017869422,73.8114680772246,86.840322717655,111.741898970068,99.467216092454,52.4300193407208,70.696168179166,2.07379224616955,2.43010688997043,1.47227472945967,3.14216082844184,14.7981922437581,2.20483438586917,2.20444583341944,2.75765635983006,3.30347642998166,4.59674417106676,5.37622866396852,2.63772575460388,2.28719109006024,0.52091337055676,7.2587579740359,6.75315132038016,5.50073691996516,6.48182888042069,6.54909731675874,3.72798891650601,81.481384026506,40.2040699768099,186.672730723881,16.3480536626463,58.4775346988665,4.31762553310254,5.19821133958135,8.96053774194671,20.5048853392358,58.4576006442738,73.7792253072147,66.427840007944,67.6048414928066,37.2146784501522,22.9324715735981,42.6640021891999,71.0090614516782,67.9004439473264,68.7513245220105,28.7743376892031,29.5189187357776,28.0555642832519,22.0326364992993,29.2286859179656,17.7573932887165,22.9098413639986,11.4061045921634,18.975655290781,51.4165532887498,26.4616823163438,26.5383165584962,16.985519244478,15.9005893291483,14.5462575940567,46.5979403045305,12.0040126774734,16.7557365450764,53.6459815938042,108.432687677858,113.981518888747,77.0045576062772,5.99162557619291,15.0975198930147,3.26701315493447,18.0777292999968,12.2743419518559,5.61027720310812,5.67844420737152,16.1924588522003,15.5508713262616,14.1524744722858,10.7325346502102,9.10843100738926,9.65588838620586,7.74267158163002,12.0563854268572,5.78310242786287,6.53379973452734,5.90320864726292,11.3829483125167,10.1316956678436,10.7790465695657,14.4279921814438,21.2619860454748,16.1267404550847,31.6909471535172,31.0731025975995,14.7285357445685,73.7323846678896,53.0136688656313,40.3512169141742,18.2270679831242,15.7132460187334,17.1058958387964,19.8865577891577,17.7087808572663,16.9693824176116,22.0907247512887,24.1446061259657,10.3921154706781,15.7977455916941,14.9392392311977,16.9433811950838,23.8305979503292,18.6617597997393,15.5679445762031,11.565947171027,2.6755199218614,64.7620814648244,36.2297276329056,12.5840067815788,15.5598570146494,15.206360436007,14.5212137728807,16.9007313322101,28.3436182907713,41.2840283543725,33.9279846731462,26.3901969240283,27.4559931416788,32.1690743746548,42.2445122067484,32.2045694313294,40.6248197438909,19.1564579962612,15.994791765362,13.5249282807697,18.3286195060783,20.9468686141036,13.1855341393799,16.8209188750524,16.8275568696746,15.8568715119789,19.8669433914099,16.3048944897932,16.017130148745,20.6386944868863,19.7878658898671,27.1832562660594,30.1471449690521,54.4899322812238,38.5512824184086,8.59316701907687,21.6903516418584,12.9391385874619,18.2349064357567,16.2259590019572,15.912469310668,8.96987067609561,11.0962009913574,49.3291017744834,17.4332098828846,14.8298128562244,17.8232340063948,23.4690248288502,33.3337452309213,44.7522044865706,41.3683333458534,29.4777719478577,31.0050565508285,27.4262202090878,32.6087996284319,26.2481172436161,28.3512154819763,55.7927750575307,44.6002660731342,17.7035138286853,16.2802680319792,6.90367536947505,5.15731421005694,70.0002216758404,15.9056684138755,18.6149849455591,16.0079885161622,17.0184484208911,19.3564726341567,21.8342700600746,18.6830510320629,17.8116708736954,21.0424217696145,24.1125544547379,15.7447445046685,19.4457916735328,24.0388564950795,13.6825045857004,25.570369060743,3.98235415019888,13.352934988524,11.4882951646605,11.6935149448657,15.651000322681,22.1353306519628,25.3259727304857,10.9060118843252,11.4079161083111,8.84902922220285,6.32511651449993,9.28219889233682,20.7668159509811,10.0834212657534,10.7367707539686,12.0028739617692,9.57637261668277,10.167022603318,12.6702745863633,17.6589670486468,24.6405293466896,33.6812992673474,24.9197089802107,82.44312647074,30.3553122188302,26.7789386681012,53.0013207373926,63.3583873015936,30.8969686827642,6.11903496634682,21.7006018613273,24.3536504196603,26.1124283591293,24.2995309536051,14.7629765938707,20.8188137617936,220.801980562018,243.375575590841,178.69256612912,55.3708958448766,13.91878371757,14.6390016331331,18.7929293029934,21.9542710815192,36.903273273104,24.2755823492677,25.7878781863048,36.3840759357801,32.6629732695318,8.69875038321696,12.9649375897364,11.2137409532984,16.876766026624,15.3616438791798,18.4698547573155,15.20605129417,11.8530811032212,15.754730566118,23.5933524957849,16.1861360953424,9.79302021276743,20.8567339614598,12.1635129174099,12.0171819882848,7.66532855568991,11.2786818270513,16.8879151564075,14.3032584928763,12.9966783913628,12.5198397935703,11.12619377163,14.6197968448419,19.3941182672107,17.0294959703383,20.336580979593,37.8639740637403,14.4290869693142,13.9953616310782,20.3140385800535,18.7393906211225,29.2784661703844,21.6118916635373,37.7288347179156,21.0660283694853,10.7302850097243,9.20650473014354,12.6037012956667,13.0608418581203,16.4419804744954,9.06472676867641,17.550585006027,16.2115633160719,35.345107900768,20.7104124700728,10.1711600632493,15.1629451892392,14.8538237006097,14.3432963070293,20.9613162627982,29.2311178435522,25.7806204249874,20.3974706666505,18.9342333659171,19.2049880940486,23.0666162900118,17.9195024316772,18.0728109416873,17.0306905396952,18.6665274105743,19.528041342606,16.4555742841695,13.8894638733868,21.0163809409686,18.1054671765309,22.286501405052,17.3926290036151,14.7830437767339,17.2962235792471,16.4691415726829,18.7844429519522,18.47572526015,16.3103221091463,16.703906003041,23.567975409625,17.3207126461294,14.4801589092078,15.9600106836179,13.479505183179,19.2906610981141,22.2331414364772,19.1823918925235,19.7681369724434,18.363679878609,28.0151102281785,26.432933260728 | ||
|short_description=p1@Sertad1 | |short_description=p1@Sertad1 | ||
}} | }} |
Latest revision as of 11:49, 26 September 2015
Short description: | p1@Sertad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sertad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2291 |
Association with transcript: | 0bp_to_NM_018820, uc009fwh.1_5end |
EntrezGene: | Sertad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 8.16e-13 | 54 |
connective tissue cell | 5.20e-10 | 46 |
mesenchymal cell | 5.20e-10 | 46 |
hematopoietic cell | 2.48e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.48e-08 | 32 |
hematopoietic stem cell | 2.48e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.48e-08 | 32 |
epithelial cell | 5.27e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.20e-10 | 46 |
mucosa | 1.14e-07 | 15 |
intestinal mucosa | 5.69e-07 | 13 |
wall of intestine | 5.69e-07 | 13 |
gastrointestinal system mucosa | 5.69e-07 | 13 |
organ component layer | 6.02e-07 | 24 |
musculoskeletal system | 9.14e-07 | 32 |