FFCP PHASE1:Hg19::chr11:128283298..128283317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:128283298..128283317,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr11:128283298..128283317,+ | |description=CAGE_peak_at_chr11:128283298..128283317,+ | ||
|id=chr11:128283298..128283317,+ | |id=chr11:128283298..128283317,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.23e-25!24;CL:0000826!3.23e-25!24;CL:0000838!1.46e-18!52;CL:0000542!3.41e-18!53;CL:0000051!3.41e-18!53;CL:0000946!8.58e-14!1;CL:0000786!8.58e-14!1;CL:0000980!8.58e-14!1;CL:0000785!1.54e-07!2;CL:0000955!1.54e-07!2;CL:0000818!1.54e-07!2;CL:0000954!1.54e-07!2;CL:0000816!1.54e-07!2;CL:0002087!1.87e-07!119;CL:0002031!4.11e-07!124 | |ontology_enrichment_celltype=CL:0000945!3.23e-25!24;CL:0000826!3.23e-25!24;CL:0000838!1.46e-18!52;CL:0000542!3.41e-18!53;CL:0000051!3.41e-18!53;CL:0000946!8.58e-14!1;CL:0000786!8.58e-14!1;CL:0000980!8.58e-14!1;CL:0000785!1.54e-07!2;CL:0000955!1.54e-07!2;CL:0000818!1.54e-07!2;CL:0000954!1.54e-07!2;CL:0000816!1.54e-07!2;CL:0002087!1.87e-07!119;CL:0002031!4.11e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.36e-27;24!CL:0000542;2.56e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.55e-27,24;CL:0000826,5.55e-27,24;CL:0000838,7.03e-13,52;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.56e-07;53!UBERON:0004872;6.21e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!3.11e-20!10;DOID:4960!6.65e-14!1;DOID:0070004!6.65e-14!1;DOID:0060060!9.73e-14!1;DOID:0060061!9.73e-14!1;DOID:8691!9.73e-14!1 | |ontology_enrichment_disease=DOID:0060058!3.11e-20!10;DOID:4960!6.65e-14!1;DOID:0070004!6.65e-14!1;DOID:0060060!9.73e-14!1;DOID:0060061!9.73e-14!1;DOID:8691!9.73e-14!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.27e-28!7;UBERON:0002106!1.51e-17!3;UBERON:0004854!1.51e-17!3;UBERON:0009034!1.51e-17!3;UBERON:0002095!1.51e-17!3;UBERON:0004782!1.51e-17!3;UBERON:0003281!1.51e-17!3;UBERON:0009664!1.51e-17!3;UBERON:0002296!1.51e-17!3;UBERON:0005602!1.51e-17!3;UBERON:0001179!1.51e-17!3;UBERON:0006293!1.51e-17!3;UBERON:0002370!4.66e-13!4;UBERON:0005058!4.66e-13!4;UBERON:0009113!4.66e-13!4;UBERON:0003295!4.66e-13!4;UBERON:0005562!4.66e-13!4;UBERON:0003351!5.15e-09!6;UBERON:0005057!8.34e-08!26;UBERON:0000945!3.78e-07!8;UBERON:0010039!3.78e-07!8 | |ontology_enrichment_uberon=UBERON:0004177!3.27e-28!7;UBERON:0002106!1.51e-17!3;UBERON:0004854!1.51e-17!3;UBERON:0009034!1.51e-17!3;UBERON:0002095!1.51e-17!3;UBERON:0004782!1.51e-17!3;UBERON:0003281!1.51e-17!3;UBERON:0009664!1.51e-17!3;UBERON:0002296!1.51e-17!3;UBERON:0005602!1.51e-17!3;UBERON:0001179!1.51e-17!3;UBERON:0006293!1.51e-17!3;UBERON:0002370!4.66e-13!4;UBERON:0005058!4.66e-13!4;UBERON:0009113!4.66e-13!4;UBERON:0003295!4.66e-13!4;UBERON:0005562!4.66e-13!4;UBERON:0003351!5.15e-09!6;UBERON:0005057!8.34e-08!26;UBERON:0000945!3.78e-07!8;UBERON:0010039!3.78e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-14;3!UBERON:0004177;3.35e-09;5!UBERON:0005057;3.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.83e-14,3;UBERON:0004854,1.83e-14,3;UBERON:0009034,1.83e-14,3;UBERON:0002095,1.83e-14,3;UBERON:0004782,1.83e-14,3;UBERON:0003281,1.83e-14,3;UBERON:0009664,1.83e-14,3;UBERON:0002296,1.83e-14,3;UBERON:0005602,1.83e-14,3;UBERON:0001179,1.83e-14,3;UBERON:0006293,1.83e-14,3;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,7.63535481884495,7.00525953691745,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.69899965072379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,7.63535481884495,7.00525953691745,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.69899965072379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:128283298..128283317,+ | |short_description=p@chr11:128283298..128283317,+ | ||
}} | }} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:128283298..128283317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128283298..128283317, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.55e-27 | 24 |
pro-B cell | 5.55e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.03e-13 | 52 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.83e-14 | 3 |
gastrointestinal system mesentery | 1.83e-14 | 3 |
stomach region | 1.83e-14 | 3 |
mesentery | 1.83e-14 | 3 |
gastrointestinal system serosa | 1.83e-14 | 3 |
mesentery of stomach | 1.83e-14 | 3 |
gut mesentery | 1.83e-14 | 3 |
dorsal mesentery | 1.83e-14 | 3 |
dorsal mesogastrium | 1.83e-14 | 3 |
peritoneal cavity | 1.83e-14 | 3 |
spleen primordium | 1.83e-14 | 3 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |