FFCP PHASE1:Hg19::chr11:125479344..125479364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3703 | |EntrezGene=3703 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6172 | |HGNC=6172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000524639_5end | |association_with_transcript=30bp_to_ENST00000524639_5end | ||
|cluster_id=chr11:125479344..125479364,+ | |||
|description=CAGE_peak_3_at_STT3A_5end | |description=CAGE_peak_3_at_STT3A_5end | ||
|id=chr11:125479344..125479364,+ | |id=chr11:125479344..125479364,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-13!180;CL:0000548!5.20e-12!679;CL:0000004!5.20e-12!679;CL:0000255!5.20e-12!679;CL:0000012!2.29e-11!682;CL:0000144!2.14e-09!625;CL:0000220!7.34e-09!246;CL:0000057!7.98e-09!75;CL:0002321!1.47e-08!248;CL:0002371!3.75e-08!591 | |ontology_enrichment_celltype=CL:0000055!1.29e-13!180;CL:0000548!5.20e-12!679;CL:0000004!5.20e-12!679;CL:0000255!5.20e-12!679;CL:0000012!2.29e-11!682;CL:0000144!2.14e-09!625;CL:0000220!7.34e-09!246;CL:0000057!7.98e-09!75;CL:0002321!1.47e-08!248;CL:0002371!3.75e-08!591 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.97e-07,41;UBERON:0007524,3.22e-07,73;UBERON:0002329,4.18e-07,71;UBERON:0003059,4.18e-07,71;UBERON:0007282,4.18e-07,71;UBERON:0004290,4.18e-07,71;UBERON:0009618,4.18e-07,71;UBERON:0003077,7.98e-07,72;UBERON:0007285,7.98e-07,72 | |||
|phase1_expression=1.63510541343501,5.78071414505655,1.83240725324762,2.00146596706261,2.23480547213644,6.10636966870258,0,0.631719873426831,0.783556884599516,1.47440361900905,1.39560233594486,0.655324116390517,0.527533956456907,1.8564952944007,2.31978163009541,2.6893005858071,2.41077811209591,1.46062018077475,3.41552959153355,0.984968464614303,0.612002073732759,0.313454721478088,1.43117993565528,2.32686522623903,1.63205431473244,0.840547463227464,0.410502947249729,0.629686250509434,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,1.23947520928483,0.426507697462265,0.587200878669695,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0.755751887377619,0,0.232429036905685,0,0.929119112685311,0,0.256160706529101,0.236482229888585,1.03423704220986,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,1.3031330682307,0,0.736555271975129,0,0.422510572623884,0.637812899895131,0.209658645508376,0.44931452458598,0.300353785683013,0.16072558669708,0,0.59675003159727,0.182664153764634,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0.764546456250458,0,0,0.526768169550154,0,0,0.411202997999018,0.167186495390678,0,0,0,0.779873198196215,0,0,0.270803863765016,0.896639238079726,0.650296737799391,0.986627427622057,0.829050053357545,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.793165398882963,0,0,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0.947109008176067,0,0,0.267440195783507,0.434473211648397,0,1.34140171940727,1.02290049474824,3.2529523714611,0.50133791063589,2.462390822334,3.9764297352555,4.86634870302636,0.661743720148475,2.88248216701333,1.31752178539689,0.261958150995425,0.364295288292542,0.370784442784429,0.649094787309367,0.174129737299267,0.664789802594326,1.43094374583205,0,0.371457501329565,1.59009925893364,0.860234595106124,0.694281003215189,0,0.419499436209906,1.92582629358047,1.46296476575767,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,1.22031028774085,0.735326160691737,2.43042584364528,1.16089646769304,0.22452937262617,0,1.53316637465883,0,0.732806975721629,0,0,0.436094052142534,1.49091585508596,2.5326102332916,1.19168262731897,4.87622255272983,3.19201543978521,2.24271040056923,3.20246987189115,2.4666754841716,0,1.61652806483626,3.10577615915572,0.908144565869588,0,0,1.87296046098192,0.570471821544449,1.34503812496621,1.52664848236894,1.94247533241758,1.68540968042698,0.816616685019573,1.84251475967652,0.619954687054593,1.18800285728205,3.21447008062124,0,0.718618141816238,1.68336113954066,1.50142223846357,0.277064115484183,0.438977620880838,2.14541457059314,1.05166641234618,2.1552114800404,1.25572744982203,2.77624605464138,1.69545520927649,4.80145753735044,1.23663035086127,2.31876486041066,2.79175284497385,3.03797398034279,2.24105111870757,1.00973509697646,1.74894807420369,2.10139873864455,5.68015348026583,1.20902517873168,2.20428770003634,1.35282597214308,0.818238361772504,0.286804595389004,0.487894824518382,0.132529768321485,0.348581828608555,0.518305275076852,1.26160425437814,1.45990943630332,3.12899064659632,3.85944562915731,0,1.39310378409594,2.16563844500876,1.0647612003586,1.01150814046861,1.68707720918437,1.21323370005633,0.435758888184812,0.949082476444386,1.48314438976181,1.37355025587742,1.15424147083917,0.738155454624648,0,0.4115740113314,0,3.80265104465493,0,1.77236972004421,2.20731549707325,2.95172252503473,1.02940686179115,0.878002283269004,3.37205259772859,1.20634766893957,1.29623823221941,0.651616610620649,2.07986957055916,4.3299402607582,0.695582429850461,0.587043471179108,0.866198686566443,1.85194205030644,1.71228737011138,0,0.858486162094873,0,0.468008530278475,0.148631162288728,0,0.671928512795438,0.425325291727159,0.985143749731331,0.581267877027924,2.68367875415648,0,0.528290604079356,0.414656231081544,0,0,0.952468414382536,0.381988425558278,1.17217447210047,0,1.13110241973656,2.70308752059526,2.85826432630578,0.672786506072164,1.30788020649984,1.6134422880609,0.775630294546667,0,0,3.72313363218819,5.2003718455683,1.54324424557285,4.25547396069835,0,1.14382394926518,1.62786481617433,0,0.325736184293735,1.06617584622764,2.37585561880029,1.50719688529793,0,1.19967589418468,0,0.502257091432126,14.7583757638122,2.15662369942424,2.29723871668228,0,2.17171960001369,2.4657158706046,0.179060963239896,0.560425719967636,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,2.31986643833309,0.670065061337395,0.637938751653163,0,0,0,0.981531933753119,2.00068208423871,1.89885516589815,1.87173775377726,4.99601168632053,2.52323864054295,0.585707074963566,0.601892199455438,2.27407504055985,0,0.664225598535437,0.553107505625109,2.5196248195744,0.587403472388222,0.343143423810856,0,0.215714200818617,0,0,3.32870879020994,0.604780586659361,0.992431231275107,1.68808170616869,6.73584226639377,3.84417447767103,1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| ||
|short_description=p3@STT3A | |short_description=p3@STT3A | ||
}} | }} |
Latest revision as of 13:18, 16 September 2015
Short description: | p3@STT3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STT3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000524639_5end |
EntrezGene: | STT3A |
HGNC: | 6172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.97e-07 | 41 |
dense mesenchyme tissue | 3.22e-07 | 73 |
somite | 4.18e-07 | 71 |
presomitic mesoderm | 4.18e-07 | 71 |
presumptive segmental plate | 4.18e-07 | 71 |
dermomyotome | 4.18e-07 | 71 |
trunk paraxial mesoderm | 4.18e-07 | 71 |
paraxial mesoderm | 7.98e-07 | 72 |
presumptive paraxial mesoderm | 7.98e-07 | 72 |