FFCP PHASE1:Hg19::chr10:118031798..118031838,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:118031798..118031838,-
|short_description=p4@GFRA1
|description=CAGE_peak_4_at_GFRA1_5end
|association_with_transcript=0bp_to_NM_145793,uc001lci.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt=P56159 | |UniProt=P56159 | ||
|association_with_transcript=0bp_to_NM_145793,uc001lci.2_5end | |||
|cluster_id=chr10:118031798..118031838,- | |||
|description=CAGE_peak_4_at_GFRA1_5end | |||
|id=chr10:118031798..118031838,- | |||
|ontology_enrichment_celltype=CL:1000497!7.34e-08!18;CL:0002518!7.34e-08!18;CL:0000075!4.81e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.57e-11;17!CL:0002518;5.57e-11;17!CL:1000507;2.92e-09;10!CL:1000494;2.92e-09;10!CL:1000449;1.19e-08;15!CL:0000075;1.73e-08;27!CL:0000077;5.96e-07;19!CL:0000128;8.94e-07;7!CL:0000126;8.94e-07;7!CL:0000127;8.94e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.06e-11,17;CL:0002518,8.06e-11,17;CL:1000507,4.70e-09,10;CL:1000494,4.70e-09,10;CL:0000075,1.46e-08,27;CL:1000449,1.67e-08,15;CL:0000077,6.03e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.25e-16!365;UBERON:0007023!1.93e-15!115;UBERON:0000481!1.84e-13!347;UBERON:0003075!4.80e-11!86;UBERON:0007284!4.80e-11!86;UBERON:0000153!1.95e-10!129;UBERON:0007811!1.95e-10!129;UBERON:0000033!7.08e-10!123;UBERON:0000468!7.42e-10!659;UBERON:0002346!8.81e-10!90;UBERON:0003056!4.99e-09!61;UBERON:0000483!2.35e-08!309;UBERON:0000119!2.83e-08!312;UBERON:0000477!7.47e-08!286;UBERON:0007625!1.35e-07!11;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57;UBERON:0002616!1.39e-07!59;UBERON:0005743!2.16e-07!86;UBERON:0000955!2.62e-07!69;UBERON:0006238!2.62e-07!69;UBERON:0000467!3.31e-07!625;UBERON:0000062!4.01e-07!511;UBERON:0000480!4.26e-07!626;UBERON:0004121!4.65e-07!169;UBERON:0000080!5.02e-07!18;UBERON:0002120!5.02e-07!18;UBERON:0004875!5.02e-07!18;UBERON:0005721!5.02e-07!18;UBERON:0005754!5.02e-07!18;UBERON:0007297!5.02e-07!18;UBERON:0003887!5.90e-07!21;UBERON:0006555!6.97e-07!17;UBERON:0005103!6.97e-07!17;UBERON:0000083!6.97e-07!17;UBERON:0009201!6.97e-07!17;UBERON:0004819!6.97e-07!17;UBERON:0006553!6.97e-07!17;UBERON:0003074!6.97e-07!17;UBERON:0003060!6.97e-07!17;UBERON:0004876!7.77e-07!20;UBERON:0002113!7.98e-07!27;UBERON:0003918!7.98e-07!27;UBERON:0005095!7.98e-07!27;UBERON:0007687!7.98e-07!27;UBERON:0000489!8.22e-07!32;UBERON:0000073!9.18e-07!94;UBERON:0001016!9.18e-07!94;UBERON:0001017!9.59e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.97e-11;11!UBERON:0004211;2.92e-09;10!UBERON:0009773;2.92e-09;10!UBERON:0001231;2.92e-09;10!UBERON:0004810;2.92e-09;10!UBERON:0006555;1.19e-08;15!UBERON:0004819;1.19e-08;15!UBERON:0001285;1.19e-08;15!UBERON:0007684;1.19e-08;15!UBERON:0002113;1.02e-07;24!UBERON:0011143;1.02e-07;24!UBERON:0000020;1.13e-07;23!UBERON:0000489;1.60e-07;29!UBERON:0001032;3.36e-07;24!UBERON:0004456;3.36e-07;24!UBERON:0000970;7.93e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.06e-11,11;UBERON:0006555,2.56e-09,16;UBERON:0004819,2.56e-09,16;UBERON:0004810,4.70e-09,10;UBERON:0004211,1.67e-08,15;UBERON:0009773,1.67e-08,15;UBERON:0001231,1.67e-08,15;UBERON:0001285,1.67e-08,15;UBERON:0007684,1.67e-08,15;UBERON:0004208,1.67e-08,15;UBERON:0002113,8.06e-08,26;UBERON:0003918,8.06e-08,26;UBERON:0011143,8.06e-08,26;UBERON:0005095,8.06e-08,26;UBERON:0007687,8.06e-08,26;UBERON:0000489,1.21e-07,31;UBERON:0000020,2.60e-07,24;UBERON:0001032,2.60e-07,24;UBERON:0004456,2.60e-07,24 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0.631719873426831,1.04474251279935,0.491467873003018,4.88460817580699,0,0,0.618831764800233,1.32558950291166,0.672325146451775,0,0,0,2.46242116153576,3.06001036866379,2.19418305034661,0.85870796139317,4.24310717725941,6.77930253811935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,1.73815822752988,0,0,5.76662384700814,6.43015252641436,2.72287835648691,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0.805658634218294,0.760272105718513,1.46437234528902,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0,0,0,2.80338800071154,0,0.24666754841716,0,0,0,0.454072282934794,0,1.40592859100278,0,0,0,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0,0,2.37600571456411,0.741800787835671,0,0,0,0.125118519871964,0,0,0.612975591598039,0.45071417671979,0.113432183160021,1.97328599257748,2.98980344345994,0.423863802319124,0.300091096084402,0.515262646192195,1.8034837803194,2.97786970130544,0.168776332241266,0,1.51460264546469,2.66944706062668,3.23292113637624,2.4850671476163,1.0075209822764,0.67824236924195,0,0,0,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0.36497735907583,3.12899064659632,5.78916844373597,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,5.07020139287323,4.91413608338813,2.95394953340702,0,0,5.49016992955282,0,0,0,0,1.3032332212413,0,2.88662684050547,6.72396348855446,2.23076519048061,4.18662698507114,2.77791307545966,2.09279567458058,11.0628615714299,7.72637545885385,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.25248486685276,0.063497894292169,1.90994212779139,1.17217447210047,0,0,0,0,0,0.87192013766656,0,0.904902010304444,0,0,0.531876233169741,0,0,2.83698264046557,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,3.35474797688216,8.04033550838797,0,0.579125226670317,0.821905290201534,2.86497541183833,0,0,0,0,0,0,0,1.00509759200609,0,0,0,0,1.2269149171914,0,0,3.53550464602372,6.95873056308931,6.30809660135739,1.63997980989798,0,0,0,0,0.553107505625109,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,2.41110341145674,0.182091168006717,2.22911505431021,2.70719767744447,1.00119938235739,3.13739907670742,2.92278449306521,3.69430701125065,0,0.170093705276516,4.53423423814493,0,4.06419656315779,2.00675909541941,1.27438136522519,0.831076008928724,8.50724067944278,0,0,2.56450125116389,1.96808787419823,0,1.23649213977267,0,0,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0.307007349452259,1.24052915236078,0.537101224341368,1.30515024522806,0.511359764496605,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,2.09693213316207,0.255897791311334,0,0,0,1.97859703341646,0.54907405947211,1.88499843753098,0,0,0,19.017715824494,0,0,0.545999645631943,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,7.17765960012058,5.26871828735843,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,1.1253553312841,0,0,0,2.19172787076177,1.38141957765574,0,2.35217969754956,0,2.79935628895627,0,0,0,1.479651084554,0,4.44547960578548,0,0.834912883456661,0,1.5625665665114,0,4.34999745260876,0,0,0,0,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0,0.295547618953547,0.438770794307945,0,0,1.76985594558733,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0.995261931078505,1.23840590304675,3.66618086960175,2.6686901581256,3.83048210734159,3.65476823269094,0.269604531922708,4.01288823649394,0.702793337176017,0,0,0,1.57833761139756,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,2.03676934625681,0,1.12990370390266,0,0,0.379864775735272,0,0,1.49417096317547,0,0,0,0,0,0,0,0.67952103036807,1.15063130943567,1.73396969981747,0,0,0.684526894459965,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0.399358000997982,1.28767814440971,2.00854311697685,0.604651252380536,0,0,0,0,0,0.78741985211799,0,0.795229689809303,0.681017030557878,0,0.275078873194468,0,0,0,0.425246896606173,0,0.630445658393585,1.36381929150995,0,0,0,1.42939065274673,0.662091970365432,0,0.542999601753713,0,0,4.7892076624995,0,3.9189245010647,0,2.19828350517124,0,0.904980694530854,0.79339561045614,0,0,0.533937062838473,2.35806457649499,0.828478110694391,1.48849806543585,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,0.122026264901963,0.751145584238999,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.757612021100357,2.76724691927833,0,0,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,0,0,1.04349012362347,0,0,1.22061219961398,0,0.429642228169954,0,1.59238355479446,2.40016658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| ||
|short_description=p4@GFRA1 | |||
}} | }} |
Latest revision as of 13:48, 16 September 2015
Short description: | p4@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_145793, uc001lci.2_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | P56159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.06e-11 | 17 |
kidney epithelial cell | 8.06e-11 | 17 |
kidney tubule cell | 4.70e-09 | 10 |
nephron tubule epithelial cell | 4.70e-09 | 10 |
columnar/cuboidal epithelial cell | 1.46e-08 | 27 |
epithelial cell of nephron | 1.67e-08 | 15 |
mesothelial cell | 6.03e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 3.06e-11 | 11 |
excretory tube | 2.56e-09 | 16 |
kidney epithelium | 2.56e-09 | 16 |
nephron tubule epithelium | 4.70e-09 | 10 |
nephron epithelium | 1.67e-08 | 15 |
renal tubule | 1.67e-08 | 15 |
nephron tubule | 1.67e-08 | 15 |
nephron | 1.67e-08 | 15 |
uriniferous tubule | 1.67e-08 | 15 |
nephrogenic mesenchyme | 1.67e-08 | 15 |
kidney | 8.06e-08 | 26 |
kidney mesenchyme | 8.06e-08 | 26 |
upper urinary tract | 8.06e-08 | 26 |
kidney rudiment | 8.06e-08 | 26 |
kidney field | 8.06e-08 | 26 |
cavitated compound organ | 1.21e-07 | 31 |
sense organ | 2.60e-07 | 24 |
sensory system | 2.60e-07 | 24 |
entire sense organ system | 2.60e-07 | 24 |