FFCP PHASE1:Mm9::chr7:20281715..20281736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20281715..20281736,- | |||
|description=CAGE_peak_at_chr7:20281715..20281736,- | |description=CAGE_peak_at_chr7:20281715..20281736,- | ||
|id=chr7:20281715..20281736,- | |id=chr7:20281715..20281736,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-10,5;CL:0002194,2.69e-08,4;CL:0000766,2.69e-08,4;CL:0000234,2.69e-08,4;CL:0000576,2.69e-08,4;CL:0000235,2.69e-08,4;CL:0000864,2.69e-08,4;CL:0002009,2.69e-08,4;CL:0000040,2.69e-08,4;CL:0000559,2.69e-08,4;CL:0002092,1.85e-07,3;CL:0002540,1.85e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.11e-15!22;UBERON:0007499!6.11e-15!22;UBERON:0006925!6.11e-15!22;UBERON:0009497!6.11e-15!22;UBERON:0000015!6.11e-15!22;UBERON:0002423!6.11e-15!22;UBERON:0006235!6.11e-15!22;UBERON:0008835!6.11e-15!22;UBERON:0003894!6.11e-15!22;UBERON:0004161!6.11e-15!22;UBERON:0008836!6.11e-15!22;UBERON:0002365!2.06e-14!25;UBERON:0002330!2.06e-14!25;UBERON:0009854!8.45e-14!23;UBERON:0009856!8.45e-14!23;UBERON:0005256!2.66e-09!47;UBERON:0005172!6.65e-08!49;UBERON:0005173!6.65e-08!49;UBERON:0002417!6.65e-08!49;UBERON:0000916!6.65e-08!49;UBERON:0000025!2.46e-07!114;UBERON:0004111!2.85e-07!122 | |ontology_enrichment_uberon=UBERON:0002107!6.11e-15!22;UBERON:0007499!6.11e-15!22;UBERON:0006925!6.11e-15!22;UBERON:0009497!6.11e-15!22;UBERON:0000015!6.11e-15!22;UBERON:0002423!6.11e-15!22;UBERON:0006235!6.11e-15!22;UBERON:0008835!6.11e-15!22;UBERON:0003894!6.11e-15!22;UBERON:0004161!6.11e-15!22;UBERON:0008836!6.11e-15!22;UBERON:0002365!2.06e-14!25;UBERON:0002330!2.06e-14!25;UBERON:0009854!8.45e-14!23;UBERON:0009856!8.45e-14!23;UBERON:0005256!2.66e-09!47;UBERON:0005172!6.65e-08!49;UBERON:0005173!6.65e-08!49;UBERON:0002417!6.65e-08!49;UBERON:0000916!6.65e-08!49;UBERON:0000025!2.46e-07!114;UBERON:0004111!2.85e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.51e-23,22;UBERON:0007499,3.51e-23,22;UBERON:0006925,3.51e-23,22;UBERON:0009497,3.51e-23,22;UBERON:0000015,3.51e-23,22;UBERON:0002423,3.51e-23,22;UBERON:0006235,3.51e-23,22;UBERON:0008835,3.51e-23,22;UBERON:0003894,3.51e-23,22;UBERON:0004161,3.51e-23,22;UBERON:0008836,3.51e-23,22;UBERON:0009854,5.76e-22,23;UBERON:0009856,5.76e-22,23;UBERON:0002365,7.92e-20,25;UBERON:0002330,7.92e-20,25;UBERON:0005256,4.32e-10,45;UBERON:0003914,1.83e-09,47;UBERON:0000025,2.13e-08,114;UBERON:0005172,6.53e-08,49;UBERON:0005173,6.53e-08,49;UBERON:0002417,6.53e-08,49;UBERON:0000916,6.53e-08,49;UBERON:0004111,2.31e-07,122 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,1.1665793944457,0,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,22.497492932035,35.5991890524111,14.9200824138681,9.28760342607055,9.22123932771731,0,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0.766124028511126,1.0752457327937,0.131886287730194,0,0,1.3959149950069,2.25105044012672,1.5279824777681,1.17851434189467,0.854230084794618,0,0,0,4.05810284182349,32.6961073252927,4.75979933595425,13.4925797909454,10.3964226791627,8.51251085484938,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,4.22480354960522,0.776813650941515,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0,0.125666591329675,1.23597483867187,0.433798070759735,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,1.37250180845588,0,0.521472960576829,0,1.0389402227978,0.162241263067758,0,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.438599962275997,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,4.15033677922008,0.333690211432188,0.393117990226406,0.899448449539415,0.405720242777006,0.72353147925725,1.78238096246994,3.16465751195892,2.59416362840057,3.29473695825698,60.3826467414889,5.20997326735905,3.43241440426017,2.02063102357689,3.04975602987251,4.82443521363367,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,7.53956419696361,1.08781136763742,0.491764273019036,0.551873492609465,0.642202359951168,0.586058432961016,0,0.504941854408746,0,0,0,1.91175038362042,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,1.6488625294148,0.161464426695906,0,0,0.164140899745061,0,0.556275906031529,0.341741761595705,0,0,0,0.410082683163076,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,1.89038500578056,2.74033007908257,1.5107877947794,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0,0.551530525350042,1.55572709461131,0.412070114477788,0.64183841918363,0.758091635291392,1.01391719956096,0.377252682772152,0.280924522409647,0.512201219238954,0.17230640686684,0,1.0429589335037,0.192909220463705,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,1.90748951957857,1.16277133305863,0.752875043322645,0.846146078916765,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr7:20281715..20281736,- | |short_description=p@chr7:20281715..20281736,- | ||
}} | }} |
Latest revision as of 18:19, 4 August 2015
Short description: | p@chr7:20281715..20281736, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20281715..20281736, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.17e-10 | 5 |
monopoietic cell | 2.69e-08 | 4 |
myeloid leukocyte | 2.69e-08 | 4 |
phagocyte | 2.69e-08 | 4 |
monocyte | 2.69e-08 | 4 |
macrophage | 2.69e-08 | 4 |
tissue-resident macrophage | 2.69e-08 | 4 |
macrophage dendritic cell progenitor | 2.69e-08 | 4 |
monoblast | 2.69e-08 | 4 |
promonocyte | 2.69e-08 | 4 |
bone marrow cell | 1.85e-07 | 3 |
mesenchymal stem cell of the bone marrow | 1.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.51e-23 | 22 |
epithelial sac | 3.51e-23 | 22 |
digestive gland | 3.51e-23 | 22 |
epithelium of foregut-midgut junction | 3.51e-23 | 22 |
anatomical boundary | 3.51e-23 | 22 |
hepatobiliary system | 3.51e-23 | 22 |
foregut-midgut junction | 3.51e-23 | 22 |
hepatic diverticulum | 3.51e-23 | 22 |
liver primordium | 3.51e-23 | 22 |
septum transversum | 3.51e-23 | 22 |
liver bud | 3.51e-23 | 22 |
digestive tract diverticulum | 5.76e-22 | 23 |
sac | 5.76e-22 | 23 |
exocrine gland | 7.92e-20 | 25 |
exocrine system | 7.92e-20 | 25 |
trunk mesenchyme | 4.32e-10 | 45 |
epithelial tube | 1.83e-09 | 47 |
tube | 2.13e-08 | 114 |
abdomen element | 6.53e-08 | 49 |
abdominal segment element | 6.53e-08 | 49 |
abdominal segment of trunk | 6.53e-08 | 49 |
abdomen | 6.53e-08 | 49 |
anatomical conduit | 2.31e-07 | 122 |