FFCP PHASE1:Mm9::chr7:17788818..17788834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114872 | |EntrezGene=114872 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=Q3URN6 | |UniProt=Q3URN6 | ||
|association_with_transcript=0bp_to_ENSMUST00000075934,NM_054064,uc012fam.1_5end | |association_with_transcript=0bp_to_ENSMUST00000075934,NM_054064,uc012fam.1_5end | ||
|cluster_id=chr7:17788818..17788834,+ | |||
|description=CAGE_peak_1_at_Psg29_5end | |description=CAGE_peak_1_at_Psg29_5end | ||
|id=chr7:17788818..17788834,+ | |id=chr7:17788818..17788834,+ | ||
|ontology_enrichment_celltype=CL:0000349!8.55e-27!3;CL:0000351!8.55e-27!3 | |ontology_enrichment_celltype=CL:0000349!8.55e-27!3;CL:0000351!8.55e-27!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.72e-37,3;CL:0000351,3.72e-37,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.38e-28!3;UBERON:0000478!7.38e-28!3;UBERON:0000158!7.38e-28!3;UBERON:0000358!8.55e-27!3;UBERON:0000307!8.55e-27!3;UBERON:0005795!5.07e-21!4;UBERON:0000995!5.07e-21!4;UBERON:0001987!3.08e-19!2;UBERON:0003124!3.08e-19!2;UBERON:0004340!3.08e-19!2;UBERON:0003975!5.81e-17!5;UBERON:0003134!7.60e-11!8;UBERON:0000305!2.48e-10!1;UBERON:0006834!3.04e-10!1;UBERON:0004175!1.05e-09!9;UBERON:0000474!1.05e-09!9;UBERON:0003100!4.82e-08!11 | |ontology_enrichment_uberon=UBERON:0005631!7.38e-28!3;UBERON:0000478!7.38e-28!3;UBERON:0000158!7.38e-28!3;UBERON:0000358!8.55e-27!3;UBERON:0000307!8.55e-27!3;UBERON:0005795!5.07e-21!4;UBERON:0000995!5.07e-21!4;UBERON:0001987!3.08e-19!2;UBERON:0003124!3.08e-19!2;UBERON:0004340!3.08e-19!2;UBERON:0003975!5.81e-17!5;UBERON:0003134!7.60e-11!8;UBERON:0000305!2.48e-10!1;UBERON:0006834!3.04e-10!1;UBERON:0004175!1.05e-09!9;UBERON:0000474!1.05e-09!9;UBERON:0003100!4.82e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.17e-38,3;UBERON:0000478,1.17e-38,3;UBERON:0000158,1.17e-38,3;UBERON:0000358,3.72e-37,3;UBERON:0000307,3.72e-37,3;UBERON:0007010,3.72e-37,3;UBERON:0005795,3.88e-29,4;UBERON:0000995,3.88e-29,4;UBERON:0001987,1.78e-26,2;UBERON:0003124,1.78e-26,2;UBERON:0004340,1.78e-26,2;UBERON:0003975,1.73e-23,5;UBERON:0003134,5.50e-15,8;UBERON:0000305,6.50e-14,1;UBERON:0006834,8.69e-14,1;UBERON:0004175,2.10e-13,9;UBERON:0000474,2.10e-13,9;UBERON:0003100,4.24e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,165.373433414296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,470.047431251612,926.341645887486,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,4.12683740403588,11.7519231454855,0,13.5131382324851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,165.373433414296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,470.047431251612,926.341645887486,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,4.12683740403588,11.7519231454855,0,13.5131382324851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Psg29 | |short_description=p1@Psg29 | ||
}} | }} |
Latest revision as of 07:36, 26 September 2015
Short description: | p1@Psg29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psg29_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 0bp_to_ENSMUST00000075934, NM_054064, uc012fam.1_5end |
EntrezGene: | Psg29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.72e-37 | 3 |
trophoblast cell | 3.72e-37 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.17e-38 | 3 |
extraembryonic structure | 1.17e-38 | 3 |
membranous layer | 1.17e-38 | 3 |
blastocyst | 3.72e-37 | 3 |
blastula | 3.72e-37 | 3 |
cleaving embryo | 3.72e-37 | 3 |
embryonic uterus | 3.88e-29 | 4 |
uterus | 3.88e-29 | 4 |
placenta | 1.78e-26 | 2 |
chorion | 1.78e-26 | 2 |
allantois | 1.78e-26 | 2 |
internal female genitalia | 1.73e-23 | 5 |
female reproductive organ | 5.50e-15 | 8 |
amnion | 6.50e-14 | 1 |
uterus or analog | 8.69e-14 | 1 |
internal genitalia | 2.10e-13 | 9 |
female reproductive system | 2.10e-13 | 9 |
female organism | 4.24e-11 | 11 |