FFCP PHASE1:Hg19::chr11:123229124..123229154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:123229124..123229154,+ | |||
|description=CAGE_peak_at_chr11:123229124..123229154,+ | |description=CAGE_peak_at_chr11:123229124..123229154,+ | ||
|id=chr11:123229124..123229154,+ | |id=chr11:123229124..123229154,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.86e-08!52;CL:0000542!5.14e-08!53;CL:0000051!5.14e-08!53;CL:0000080!8.13e-07!6 | |ontology_enrichment_celltype=CL:0000838!2.86e-08!52;CL:0000542!5.14e-08!53;CL:0000051!5.14e-08!53;CL:0000080!8.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.62e-07;24!CL:0000946;5.27e-07;1!CL:0000786;5.27e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.55e-08,52;CL:0000542,2.43e-08,53;CL:0000051,2.43e-08,53;CL:0000945,1.14e-07,24;CL:0000826,1.14e-07,24;CL:0000946,5.13e-07,1;CL:0000786,5.13e-07,1;CL:0000980,5.13e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.18e-17;3!UBERON:0010122;2.75e-11;2!UBERON:0003124;8.72e-07;1 | |||
|ontology_enrichment_disease=DOID:171!4.09e-08!10;DOID:3095!3.59e-07!22;DOID:2994!3.59e-07!22 | |ontology_enrichment_disease=DOID:171!4.09e-08!10;DOID:3095!3.59e-07!22;DOID:2994!3.59e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1287;5.86e-13;4!DOID:114;9.98e-12;2!DOID:0060058;5.44e-09;10!DOID:2355;4.33e-07;1!DOID:0060060;4.71e-07;1!DOID:0060061;4.71e-07;1!DOID:8691;4.71e-07;1!DOID:1799;5.27e-07;1!DOID:10165;5.27e-07;1!DOID:1798;5.27e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,5.64e-13,4;DOID:114,9.48e-12,2;DOID:0060058,4.71e-09,10;DOID:2355,4.33e-07,1;DOID:0060060,4.58e-07,1;DOID:0060061,4.58e-07,1;DOID:8691,4.58e-07,1;DOID:1799,5.43e-07,1;DOID:10165,5.43e-07,1;DOID:1798,5.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-22!115;UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0002616!1.54e-20!59;UBERON:0002780!9.06e-19!41;UBERON:0001890!9.06e-19!41;UBERON:0006240!9.06e-19!41;UBERON:0003080!3.74e-18!42;UBERON:0000955!3.97e-18!69;UBERON:0006238!3.97e-18!69;UBERON:0000073!4.86e-18!94;UBERON:0001016!4.86e-18!94;UBERON:0001017!3.80e-16!82;UBERON:0001893!3.93e-16!34;UBERON:0005743!4.78e-16!86;UBERON:0001869!6.61e-16!32;UBERON:0002346!1.62e-15!90;UBERON:0002791!3.60e-15!33;UBERON:0002020!7.27e-15!34;UBERON:0003528!7.27e-15!34;UBERON:0003075!2.99e-13!86;UBERON:0007284!2.99e-13!86;UBERON:0002619!1.68e-11!22;UBERON:0003056!1.94e-11!61;UBERON:0001950!2.94e-11!20;UBERON:0000956!9.62e-10!25;UBERON:0000203!9.62e-10!25;UBERON:0000153!3.68e-09!129;UBERON:0007811!3.68e-09!129;UBERON:0000369!5.79e-08!4;UBERON:0002435!5.79e-08!4;UBERON:0000204!5.79e-08!4;UBERON:0010082!5.79e-08!4;UBERON:0000924!7.58e-08!173;UBERON:0006601!7.58e-08!173;UBERON:0000033!1.48e-07!123;UBERON:0002308!6.65e-07!9;UBERON:0000125!6.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;2.27e-16;3!UBERON:0005382;2.27e-16;3!UBERON:0000369;2.06e-12;4!UBERON:0002435;2.06e-12;4!UBERON:0000204;2.06e-12;4!UBERON:0001905;6.47e-12;2!UBERON:0002757;6.47e-12;2!UBERON:0010134;6.47e-12;2!UBERON:0005408;6.47e-12;2!UBERON:0001899;6.47e-12;2!UBERON:0001873;2.75e-11;2!UBERON:0002037;6.26e-09;6!UBERON:0009663;2.73e-07;7!UBERON:0000073;4.79e-07;53!UBERON:0002616;4.79e-07;53!UBERON:0002780;4.95e-07;41!UBERON:0001890;4.95e-07;41!UBERON:0002791;7.04e-07;32!UBERON:0001874;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.99e-16,3;UBERON:0005382,1.99e-16,3;UBERON:0000369,1.87e-12,4;UBERON:0002435,1.87e-12,4;UBERON:0000204,1.87e-12,4;UBERON:0010082,1.87e-12,4;UBERON:0001905,1.06e-11,2;UBERON:0002757,1.06e-11,2;UBERON:0010134,1.06e-11,2;UBERON:0005408,1.06e-11,2;UBERON:0001899,1.06e-11,2;UBERON:0000073,1.20e-11,53;UBERON:0002616,1.20e-11,53;UBERON:0001873,2.48e-11,2;UBERON:0010122,2.48e-11,2;UBERON:0001049,6.57e-11,56;UBERON:0005068,6.57e-11,56;UBERON:0006241,6.57e-11,56;UBERON:0007135,6.57e-11,56;UBERON:0002346,5.32e-09,86;UBERON:0002037,6.28e-09,6;UBERON:0006215,6.28e-09,6;UBERON:0002780,1.68e-08,41;UBERON:0001890,1.68e-08,41;UBERON:0003080,1.68e-08,41;UBERON:0006240,1.68e-08,41;UBERON:0000955,1.87e-08,68;UBERON:0006238,1.87e-08,68;UBERON:0001016,2.48e-08,89;UBERON:0001017,4.10e-08,81;UBERON:0009663,2.59e-07,7;UBERON:0001874,8.49e-07,1;UBERON:0002791,8.79e-07,32;UBERON:0001869,8.79e-07,32;UBERON:0003075,8.88e-07,82;UBERON:0007284,8.88e-07,82 | |||
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|short_description=p@chr11:123229124..123229154,+ | |short_description=p@chr11:123229124..123229154,+ | ||
}} | }} |
Latest revision as of 19:24, 23 July 2015
Short description: | p@chr11:123229124..123229154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:123229124..123229154, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.55e-08 | 52 |
lymphocyte | 2.43e-08 | 53 |
common lymphoid progenitor | 2.43e-08 | 53 |
lymphocyte of B lineage | 1.14e-07 | 24 |
pro-B cell | 1.14e-07 | 24 |
antibody secreting cell | 5.13e-07 | 1 |
plasma cell | 5.13e-07 | 1 |
plasmablast | 5.13e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.99e-16 | 3 |
dorsal striatum | 1.99e-16 | 3 |
corpus striatum | 1.87e-12 | 4 |
striatum | 1.87e-12 | 4 |
ventral part of telencephalon | 1.87e-12 | 4 |
future corpus striatum | 1.87e-12 | 4 |
pineal body | 1.06e-11 | 2 |
regional part of epithalamus | 1.06e-11 | 2 |
secretory circumventricular organ | 1.06e-11 | 2 |
circumventricular organ | 1.06e-11 | 2 |
epithalamus | 1.06e-11 | 2 |
regional part of nervous system | 1.20e-11 | 53 |
regional part of brain | 1.20e-11 | 53 |
caudate nucleus | 2.48e-11 | 2 |
future caudate nucleus | 2.48e-11 | 2 |
neural tube | 6.57e-11 | 56 |
neural rod | 6.57e-11 | 56 |
future spinal cord | 6.57e-11 | 56 |
neural keel | 6.57e-11 | 56 |
neurectoderm | 5.32e-09 | 86 |
cerebellum | 6.28e-09 | 6 |
rhombic lip | 6.28e-09 | 6 |
regional part of forebrain | 1.68e-08 | 41 |
forebrain | 1.68e-08 | 41 |
anterior neural tube | 1.68e-08 | 41 |
future forebrain | 1.68e-08 | 41 |
brain | 1.87e-08 | 68 |
future brain | 1.87e-08 | 68 |
nervous system | 2.48e-08 | 89 |
central nervous system | 4.10e-08 | 81 |
telencephalic nucleus | 2.59e-07 | 7 |
putamen | 8.49e-07 | 1 |
regional part of telencephalon | 8.79e-07 | 32 |
cerebral hemisphere | 8.79e-07 | 32 |
neural plate | 8.88e-07 | 82 |
presumptive neural plate | 8.88e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 5.64e-13 | 4 |
heart disease | 9.48e-12 | 2 |
lymphoma | 4.71e-09 | 10 |
anemia | 4.33e-07 | 1 |
non-Hodgkin lymphoma | 4.58e-07 | 1 |
cutaneous T cell lymphoma | 4.58e-07 | 1 |
mycosis fungoides | 4.58e-07 | 1 |
islet cell tumor | 5.43e-07 | 1 |
endocrine pancreas cancer | 5.43e-07 | 1 |
pancreatic endocrine carcinoma | 5.43e-07 | 1 |