FFCP PHASE1:Hg19::chr11:119986113..119986126,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-380bp_to_BX648072_5end | |association_with_transcript=-380bp_to_BX648072_5end | ||
|cluster_id=chr11:119986113..119986126,- | |||
|coexpression_cluster_id=C1613 | |||
|description=CAGE_peak_1_at_BX648072_5end | |description=CAGE_peak_1_at_BX648072_5end | ||
|id=chr11:119986113..119986126,- | |id=chr11:119986113..119986126,- | ||
|ontology_enrichment_celltype=CL:0002076!7.02e-21!43;CL:0000066!3.81e-16!254;CL:0002251!1.27e-15!21;CL:0000223!3.60e-13!59;CL:0000622!1.81e-10!5;CL:0002159!3.58e-10!13;CL:0000154!1.30e-08!6;CL:0000150!1.94e-07!9;CL:0002623!4.73e-07!3 | |ontology_enrichment_celltype=CL:0002076!7.02e-21!43;CL:0000066!3.81e-16!254;CL:0002251!1.27e-15!21;CL:0000223!3.60e-13!59;CL:0000622!1.81e-10!5;CL:0002159!3.58e-10!13;CL:0000154!1.30e-08!6;CL:0000150!1.94e-07!9;CL:0002623!4.73e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.06e-18;5!CL:0002623;1.14e-17;3!CL:0000154;1.30e-15;6!CL:0000150;1.90e-10;9!CL:0002251;1.41e-09;20!CL:0000240;1.05e-08;6!CL:0000311;1.05e-08;6!CL:0000079;1.05e-08;6!CL:0000237;1.05e-08;6!CL:0002231;1.93e-08;3!CL:0002336;9.50e-07;1!CL:0002261;9.50e-07;1!CL:0002170;9.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.19e-18,5;CL:0002623,1.29e-17,3;CL:0000154,1.43e-15,6;CL:0000150,2.02e-10,9;CL:0002251,1.31e-09,20;CL:0000240,9.71e-09,6;CL:0000311,9.71e-09,6;CL:0000079,9.71e-09,6;CL:0000237,9.71e-09,6;CL:0000036,9.71e-09,6;CL:0000357,9.71e-09,6;CL:0000114,9.71e-09,6;CL:0002231,1.49e-08,3;CL:0000066,1.66e-08,253;CL:0002076,2.08e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;1.05e-08;6!CL:0000114;1.05e-08;6!UBERON:0008947;1.74e-08;29!UBERON:0000358;3.78e-07;1!UBERON:0009143;3.78e-07;1 | |||
|ontology_enrichment_disease=DOID:305!6.02e-07!106 | |ontology_enrichment_disease=DOID:305!6.02e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.78e-07;1!DOID:3149;3.78e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.25e-07,1;DOID:3149,4.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.66e-19!72;UBERON:0004119!9.86e-18!169;UBERON:0000925!9.86e-18!169;UBERON:0006595!9.86e-18!169;UBERON:0000161!2.24e-15!35;UBERON:0005631!3.27e-14!14;UBERON:0000158!3.27e-14!14;UBERON:0000166!5.52e-14!21;UBERON:0001557!7.54e-14!19;UBERON:0001007!3.89e-13!155;UBERON:0001555!3.89e-13!155;UBERON:0007026!3.89e-13!155;UBERON:0001737!4.61e-13!9;UBERON:0000065!5.36e-13!53;UBERON:0000077!7.67e-13!130;UBERON:0000072!5.78e-12!46;UBERON:0000165!3.18e-11!28;UBERON:0000930!3.18e-11!28;UBERON:0004921!6.79e-11!129;UBERON:0004185!6.79e-11!129;UBERON:0008947!1.10e-09!38;UBERON:0003258!1.10e-09!38;UBERON:0001041!2.16e-09!98;UBERON:0003124!2.80e-09!7;UBERON:0003102!4.50e-09!95;UBERON:0000478!9.43e-09!24;UBERON:0001044!3.46e-08!6;UBERON:0003293!3.46e-08!6;UBERON:0003294!3.46e-08!6;UBERON:0010047!3.46e-08!6;UBERON:0000167!3.46e-08!6;UBERON:0000078!6.59e-07!18;UBERON:0001444!6.84e-07!48;UBERON:0000062!9.01e-07!511 | |ontology_enrichment_uberon=UBERON:0001004!1.66e-19!72;UBERON:0004119!9.86e-18!169;UBERON:0000925!9.86e-18!169;UBERON:0006595!9.86e-18!169;UBERON:0000161!2.24e-15!35;UBERON:0005631!3.27e-14!14;UBERON:0000158!3.27e-14!14;UBERON:0000166!5.52e-14!21;UBERON:0001557!7.54e-14!19;UBERON:0001007!3.89e-13!155;UBERON:0001555!3.89e-13!155;UBERON:0007026!3.89e-13!155;UBERON:0001737!4.61e-13!9;UBERON:0000065!5.36e-13!53;UBERON:0000077!7.67e-13!130;UBERON:0000072!5.78e-12!46;UBERON:0000165!3.18e-11!28;UBERON:0000930!3.18e-11!28;UBERON:0004921!6.79e-11!129;UBERON:0004185!6.79e-11!129;UBERON:0008947!1.10e-09!38;UBERON:0003258!1.10e-09!38;UBERON:0001041!2.16e-09!98;UBERON:0003124!2.80e-09!7;UBERON:0003102!4.50e-09!95;UBERON:0000478!9.43e-09!24;UBERON:0001044!3.46e-08!6;UBERON:0003293!3.46e-08!6;UBERON:0003294!3.46e-08!6;UBERON:0010047!3.46e-08!6;UBERON:0000167!3.46e-08!6;UBERON:0000078!6.59e-07!18;UBERON:0001444!6.84e-07!48;UBERON:0000062!9.01e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.09e-21;9!UBERON:0001557;1.09e-21;9!UBERON:0001041;6.43e-10;14!UBERON:0001044;4.39e-09;6!UBERON:0003293;4.39e-09;6!UBERON:0003294;4.39e-09;6!UBERON:0010047;4.39e-09;6!UBERON:0003408;4.39e-09;6!UBERON:0000167;4.39e-09;6!UBERON:0000165;4.86e-09;28!UBERON:0001723;1.46e-08;3!UBERON:0001033;1.46e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.75e-22,9;UBERON:0001557,1.38e-17,19;UBERON:0004119,9.67e-11,160;UBERON:0000925,9.67e-11,160;UBERON:0006595,9.67e-11,160;UBERON:0001004,4.03e-10,74;UBERON:0001041,1.18e-09,87;UBERON:0001044,4.64e-09,6;UBERON:0003293,4.64e-09,6;UBERON:0003294,4.64e-09,6;UBERON:0010047,4.64e-09,6;UBERON:0000167,4.64e-09,6;UBERON:0000161,6.81e-09,36;UBERON:0000166,9.45e-09,22;UBERON:0000165,1.24e-08,29;UBERON:0000930,1.24e-08,29;UBERON:0004921,1.29e-08,118;UBERON:0001007,1.58e-08,145;UBERON:0001555,1.58e-08,145;UBERON:0007026,1.58e-08,145;UBERON:0001723,2.08e-08,3;UBERON:0001033,2.08e-08,3;UBERON:0010056,2.08e-08,3;UBERON:0003102,2.72e-08,99;UBERON:0000072,4.43e-08,47;UBERON:0005631,7.24e-07,14;UBERON:0000158,7.24e-07,14;UBERON:0000065,7.58e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.728590576585084,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.68584690078102,0.482022059766964,2.53676137284506,1.52515610864684,0.237270619111097,2.29213223872279,1.76599318612811,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.97550513735526,0,1.3068766413512,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.358234090811393,1.16253575405585,1.15014803749563,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,2.12189300012382,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,2.3941057123333,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,4.29740072527842,0.296964680832639,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.796554137998498,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.384751292518985,0,0,0,0.217294743844016,0.957003479195758,0.274792780205587,2.66517388009317,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.0870592065804026,0,0,0.580537987734511,0.365446585430928,0.739039113478883,2.32773639572207,0,0.225980740780532,0,0,0,0.977756913674015,0,0,1.79828648623917,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,2.93485757634686,0.115525666150338,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,1.03608082081518,2.7314956335032,2.76503864725637,0,0,0,0.846774100381858,0.4582137370881,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.98527574661373,0.23806443146374,0.129177819672012,0,0,0,0,4.13661821004227,1.02669990325584,0.336760265072938,0.717222053926764,0.332660356546013,0,0,0,0,2.34640942403454,0,0.813792356631477,0.665756774185513,0.402547587182052,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.728590576585084,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.68584690078102,0.482022059766964,2.53676137284506,1.52515610864684,0.237270619111097,2.29213223872279,1.76599318612811,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.97550513735526,0,1.3068766413512,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.358234090811393,1.16253575405585,1.15014803749563,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,2.12189300012382,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,2.3941057123333,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,4.29740072527842,0.296964680832639,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.796554137998498,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.384751292518985,0,0,0,0.217294743844016,0.957003479195758,0.274792780205587,2.66517388009317,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.0870592065804026,0,0,0.580537987734511,0.365446585430928,0.739039113478883,2.32773639572207,0,0.225980740780532,0,0,0,0.977756913674015,0,0,1.79828648623917,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,2.93485757634686,0.115525666150338,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,1.03608082081518,2.7314956335032,2.76503864725637,0,0,0,0.846774100381858,0.4582137370881,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.98527574661373,0.23806443146374,0.129177819672012,0,0,0,0,4.13661821004227,1.02669990325584,0.336760265072938,0.717222053926764,0.332660356546013,0,0,0,0,2.34640942403454,0,0.813792356631477,0.665756774185513,0.402547587182052,0.320568492303233 | ||
|short_description=p1@BX648072 | |short_description=p1@BX648072 | ||
}} | }} |
Latest revision as of 19:04, 23 July 2015
Short description: | p1@BX648072 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BX648072_5end |
Coexpression cluster: | C1613_tongue_Sebocyte_esophagus_amniotic_throat_Prostate_Urothelial |
Association with transcript: | -380bp_to_BX648072_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.19e-18 | 5 |
acinar cell of salivary gland | 1.29e-17 | 3 |
protein secreting cell | 1.43e-15 | 6 |
glandular epithelial cell | 2.02e-10 | 9 |
epithelial cell of alimentary canal | 1.31e-09 | 20 |
stratified squamous epithelial cell | 9.71e-09 | 6 |
keratin accumulating cell | 9.71e-09 | 6 |
stratified epithelial cell | 9.71e-09 | 6 |
keratinizing barrier epithelial cell | 9.71e-09 | 6 |
epithelial fate stem cell | 9.71e-09 | 6 |
stratified epithelial stem cell | 9.71e-09 | 6 |
surface ectodermal cell | 9.71e-09 | 6 |
epithelial cell of prostate | 1.49e-08 | 3 |
epithelial cell | 1.66e-08 | 253 |
endo-epithelial cell | 2.08e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.75e-22 | 9 |
upper respiratory tract | 1.38e-17 | 19 |
endoderm-derived structure | 9.67e-11 | 160 |
endoderm | 9.67e-11 | 160 |
presumptive endoderm | 9.67e-11 | 160 |
respiratory system | 4.03e-10 | 74 |
foregut | 1.18e-09 | 87 |
saliva-secreting gland | 4.64e-09 | 6 |
gland of oral region | 4.64e-09 | 6 |
gland of foregut | 4.64e-09 | 6 |
oral gland | 4.64e-09 | 6 |
oral cavity | 4.64e-09 | 6 |
orifice | 6.81e-09 | 36 |
oral opening | 9.45e-09 | 22 |
mouth | 1.24e-08 | 29 |
stomodeum | 1.24e-08 | 29 |
subdivision of digestive tract | 1.29e-08 | 118 |
digestive system | 1.58e-08 | 145 |
digestive tract | 1.58e-08 | 145 |
primitive gut | 1.58e-08 | 145 |
tongue | 2.08e-08 | 3 |
gustatory system | 2.08e-08 | 3 |
future tongue | 2.08e-08 | 3 |
surface structure | 2.72e-08 | 99 |
segment of respiratory tract | 4.43e-08 | 47 |
extraembryonic membrane | 7.24e-07 | 14 |
membranous layer | 7.24e-07 | 14 |
respiratory tract | 7.58e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.25e-07 | 1 |
keratoacanthoma | 4.25e-07 | 1 |