FFCP PHASE1:Hg19::chr11:118754576..118754585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643 | |EntrezGene=643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1060 | |HGNC=1060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_uc001pue.3_5end | |association_with_transcript=35bp_to_uc001pue.3_5end | ||
|cluster_id=chr11:118754576..118754585,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_CXCR5_5end | |description=CAGE_peak_4_at_CXCR5_5end | ||
|id=chr11:118754576..118754585,+ | |id=chr11:118754576..118754585,+ | ||
|ontology_enrichment_celltype=CL:0000838!7.34e-63!52;CL:0000542!1.81e-61!53;CL:0000051!1.81e-61!53;CL:0000945!6.39e-38!24;CL:0000826!6.39e-38!24;CL:0002087!5.57e-34!119;CL:0000738!1.30e-31!140;CL:0000236!4.50e-28!14;CL:0002031!3.43e-27!124;CL:0000791!5.35e-26!18;CL:0000789!5.35e-26!18;CL:0002420!5.35e-26!18;CL:0002419!5.35e-26!18;CL:0000790!5.35e-26!18;CL:0000037!2.18e-23!172;CL:0000566!2.18e-23!172;CL:0000988!2.04e-21!182;CL:0002032!4.56e-21!165;CL:0000837!4.56e-21!165;CL:0000084!1.63e-20!25;CL:0000827!1.63e-20!25;CL:0000624!1.43e-16!6;CL:0000625!7.47e-14!11;CL:0000898!5.62e-09!3;CL:0000842!2.26e-08!3;CL:0000623!2.32e-08!3;CL:0000825!2.32e-08!3 | |ontology_enrichment_celltype=CL:0000838!7.34e-63!52;CL:0000542!1.81e-61!53;CL:0000051!1.81e-61!53;CL:0000945!6.39e-38!24;CL:0000826!6.39e-38!24;CL:0002087!5.57e-34!119;CL:0000738!1.30e-31!140;CL:0000236!4.50e-28!14;CL:0002031!3.43e-27!124;CL:0000791!5.35e-26!18;CL:0000789!5.35e-26!18;CL:0002420!5.35e-26!18;CL:0002419!5.35e-26!18;CL:0000790!5.35e-26!18;CL:0000037!2.18e-23!172;CL:0000566!2.18e-23!172;CL:0000988!2.04e-21!182;CL:0002032!4.56e-21!165;CL:0000837!4.56e-21!165;CL:0000084!1.63e-20!25;CL:0000827!1.63e-20!25;CL:0000624!1.43e-16!6;CL:0000625!7.47e-14!11;CL:0000898!5.62e-09!3;CL:0000842!2.26e-08!3;CL:0000623!2.32e-08!3;CL:0000825!2.32e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.94e-54;13!CL:0000945;1.41e-39;24!CL:0000542;4.11e-33;53!CL:0000624;1.23e-23;6!CL:0000791;1.15e-14;18!CL:0000789;1.15e-14;18!CL:0002419;1.15e-14;18!CL:0000084;2.30e-13;25!CL:0000898;1.44e-08;3!CL:0002087;3.13e-08;104!CL:0000895;6.88e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.07e-50,14;CL:0000838,7.83e-50,52;CL:0000542,8.35e-49,53;CL:0000051,8.35e-49,53;CL:0000945,1.12e-39,24;CL:0000826,1.12e-39,24;CL:0002087,6.20e-24,115;CL:0000624,9.69e-24,6;CL:0002031,1.13e-20,120;CL:0000738,1.72e-19,136;CL:0000037,7.62e-15,168;CL:0000791,1.08e-14,18;CL:0000789,1.08e-14,18;CL:0002420,1.08e-14,18;CL:0002419,1.08e-14,18;CL:0000790,1.08e-14,18;CL:0002032,3.30e-14,161;CL:0000837,3.30e-14,161;CL:0000988,7.72e-14,177;CL:0000084,2.38e-13,25;CL:0000827,2.38e-13,25;CL:0000898,1.56e-08,3;CL:0000810,7.73e-07,1;CL:0000895,7.73e-07,1;CL:0002436,7.73e-07,1;CL:0002427,7.73e-07,1;CL:0002428,7.73e-07,1;CL:0002429,7.73e-07,1;CL:0002433,7.73e-07,1;CL:0002431,7.73e-07,1;CL:0002432,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.11e-33;53!CL:0000790;1.15e-14;18!UBERON:0004872;1.05e-07;7!CL:0002427;6.88e-07;1!UBERON:0001045;6.88e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.42e-12!7;UBERON:0002106!1.42e-08!3;UBERON:0004854!1.42e-08!3;UBERON:0009034!1.42e-08!3;UBERON:0002095!1.42e-08!3;UBERON:0004782!1.42e-08!3;UBERON:0003281!1.42e-08!3;UBERON:0009664!1.42e-08!3;UBERON:0002296!1.42e-08!3;UBERON:0005602!1.42e-08!3;UBERON:0001179!1.42e-08!3;UBERON:0006293!1.42e-08!3;UBERON:0000178!1.23e-07!15;UBERON:0000179!1.23e-07!15;UBERON:0000463!1.23e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.27e-08;3!UBERON:0002372;3.82e-07;1!UBERON:0001961;3.82e-07;1!UBERON:0001744;3.82e-07;1!UBERON:0001042;3.82e-07;1!UBERON:0001735;3.82e-07;1!UBERON:0000029;6.88e-07;1!UBERON:0001154;6.88e-07;1!UBERON:0001153;6.88e-07;1!UBERON:0009854;6.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.56e-08,3;UBERON:0004854,1.56e-08,3;UBERON:0009034,1.56e-08,3;UBERON:0002095,1.56e-08,3;UBERON:0004782,1.56e-08,3;UBERON:0003281,1.56e-08,3;UBERON:0009664,1.56e-08,3;UBERON:0002296,1.56e-08,3;UBERON:0005602,1.56e-08,3;UBERON:0001179,1.56e-08,3;UBERON:0006293,1.56e-08,3;UBERON:0004177,8.66e-08,7;UBERON:0005057,8.66e-08,7;UBERON:0002372,3.60e-07,1;UBERON:0001961,3.60e-07,1;UBERON:0001744,3.60e-07,1;UBERON:0001735,3.60e-07,1;UBERON:0000029,5.45e-07,1;UBERON:0001154,8.67e-07,1;UBERON:0001153,8.67e-07,1;UBERON:0001045,8.67e-07,1 | |||
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| ||
|short_description=p4@CXCR5 | |short_description=p4@CXCR5 | ||
}} | }} |
Latest revision as of 01:28, 16 September 2015
Short description: | p4@CXCR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CXCR5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 35bp_to_uc001pue.3_5end |
EntrezGene: | CXCR5 |
HGNC: | 1060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.56e-08 | 3 |
gastrointestinal system mesentery | 1.56e-08 | 3 |
stomach region | 1.56e-08 | 3 |
mesentery | 1.56e-08 | 3 |
gastrointestinal system serosa | 1.56e-08 | 3 |
mesentery of stomach | 1.56e-08 | 3 |
gut mesentery | 1.56e-08 | 3 |
dorsal mesentery | 1.56e-08 | 3 |
dorsal mesogastrium | 1.56e-08 | 3 |
peritoneal cavity | 1.56e-08 | 3 |
spleen primordium | 1.56e-08 | 3 |
hemopoietic organ | 8.66e-08 | 7 |
immune organ | 8.66e-08 | 7 |
tonsil | 3.60e-07 | 1 |
mucosa-associated lymphoid tissue | 3.60e-07 | 1 |
lymphoid tissue | 3.60e-07 | 1 |
tonsillar ring | 3.60e-07 | 1 |
lymph node | 5.45e-07 | 1 |
vermiform appendix | 8.67e-07 | 1 |
caecum | 8.67e-07 | 1 |
midgut | 8.67e-07 | 1 |