FFCP PHASE1:Hg19::chr11:112035117..112035142,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3606 | |EntrezGene=3606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |HGNC=5986 | ||
|TSSclassifier=strong | |||
|UniProt=Q14116,Q6WWJ7 | |UniProt=Q14116,Q6WWJ7 | ||
|association_with_transcript=-277bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end | |association_with_transcript=-277bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end | ||
|cluster_id=chr11:112035117..112035142,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_IL18_5end | |description=CAGE_peak_5_at_IL18_5end | ||
|id=chr11:112035117..112035142,- | |id=chr11:112035117..112035142,- | ||
|ontology_enrichment_celltype=CL:0002057!3.64e-48!42;CL:0000860!6.88e-48!45;CL:0000766!2.96e-47!76;CL:0002194!1.86e-45!63;CL:0000576!1.86e-45!63;CL:0000040!1.86e-45!63;CL:0000559!1.86e-45!63;CL:0002009!8.18e-44!65;CL:0000839!4.13e-40!70;CL:0000557!1.97e-39!71;CL:0000763!3.84e-29!112;CL:0000049!3.84e-29!112;CL:0000738!7.91e-28!140;CL:0002087!7.70e-27!119;CL:0000037!8.69e-21!172;CL:0000566!8.69e-21!172;CL:0002031!1.44e-20!124;CL:0000988!4.25e-19!182;CL:0002032!4.31e-18!165;CL:0000837!4.31e-18!165;CL:0002393!1.35e-12!9;CL:0002397!1.35e-12!9;CL:0000767!1.22e-10!3;CL:0000842!2.12e-10!3;CL:0000224!6.75e-08!4;CL:0000134!7.68e-08!358;CL:0002320!1.70e-07!365;CL:0000723!3.86e-07!436;CL:0000048!7.45e-07!430;CL:0000034!8.24e-07!444;CL:0000094!9.78e-07!8 | |ontology_enrichment_celltype=CL:0002057!3.64e-48!42;CL:0000860!6.88e-48!45;CL:0000766!2.96e-47!76;CL:0002194!1.86e-45!63;CL:0000576!1.86e-45!63;CL:0000040!1.86e-45!63;CL:0000559!1.86e-45!63;CL:0002009!8.18e-44!65;CL:0000839!4.13e-40!70;CL:0000557!1.97e-39!71;CL:0000763!3.84e-29!112;CL:0000049!3.84e-29!112;CL:0000738!7.91e-28!140;CL:0002087!7.70e-27!119;CL:0000037!8.69e-21!172;CL:0000566!8.69e-21!172;CL:0002031!1.44e-20!124;CL:0000988!4.25e-19!182;CL:0002032!4.31e-18!165;CL:0000837!4.31e-18!165;CL:0002393!1.35e-12!9;CL:0002397!1.35e-12!9;CL:0000767!1.22e-10!3;CL:0000842!2.12e-10!3;CL:0000224!6.75e-08!4;CL:0000134!7.68e-08!358;CL:0002320!1.70e-07!365;CL:0000723!3.86e-07!436;CL:0000048!7.45e-07!430;CL:0000034!8.24e-07!444;CL:0000094!9.78e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-56;33!CL:0002057;1.03e-56;33!CL:0000473;3.11e-51;39!CL:0000234;3.11e-51;39!CL:0000576;8.76e-33;48!CL:0000766;1.73e-28;69!CL:0002087;5.48e-14;104!CL:0002393;4.88e-13;6!CL:0002397;4.88e-13;6!CL:0000763;7.94e-12;100!CL:0000226;1.08e-11;3!CL:0000842;1.08e-11;3!CL:0000738;1.49e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.94e-73,48;CL:0000234,1.94e-73,48;CL:0000860,6.66e-69,42;CL:0002057,6.66e-69,42;CL:0002194,4.01e-58,59;CL:0000576,4.01e-58,59;CL:0000040,4.01e-58,59;CL:0000559,4.01e-58,59;CL:0002009,3.80e-56,61;CL:0000766,5.99e-52,72;CL:0000839,1.02e-51,66;CL:0000557,6.53e-51,67;CL:0002087,1.37e-34,115;CL:0000763,1.05e-33,108;CL:0000049,1.05e-33,108;CL:0000738,1.50e-31,136;CL:0002031,3.53e-27,120;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0002032,1.46e-21,161;CL:0000837,1.46e-21,161;CL:0000226,1.21e-11,3;CL:0000842,1.21e-11,3;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0002393,7.25e-09,9;CL:0002397,7.25e-09,9;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.95e-49;42!CL:0000049;3.60e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.59e-35!112;UBERON:0002390!6.09e-35!102;UBERON:0003061!6.09e-35!102;UBERON:0002371!4.41e-34!80;UBERON:0002405!1.04e-31!115;UBERON:0001474!3.92e-31!86;UBERON:0004765!2.73e-25!101;UBERON:0001434!2.73e-25!101;UBERON:0002204!3.18e-15!167;UBERON:0003081!1.51e-12!216;UBERON:0000926!4.36e-07!448;UBERON:0004120!4.36e-07!448;UBERON:0006603!4.36e-07!448;UBERON:0002384!5.00e-07!375 | |ontology_enrichment_uberon=UBERON:0002193!5.59e-35!112;UBERON:0002390!6.09e-35!102;UBERON:0003061!6.09e-35!102;UBERON:0002371!4.41e-34!80;UBERON:0002405!1.04e-31!115;UBERON:0001474!3.92e-31!86;UBERON:0004765!2.73e-25!101;UBERON:0001434!2.73e-25!101;UBERON:0002204!3.18e-15!167;UBERON:0003081!1.51e-12!216;UBERON:0000926!4.36e-07!448;UBERON:0004120!4.36e-07!448;UBERON:0006603!4.36e-07!448;UBERON:0002384!5.00e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-44,76;UBERON:0001474,3.95e-41,82;UBERON:0002390,4.18e-41,98;UBERON:0003061,4.18e-41,98;UBERON:0004765,3.15e-37,90;UBERON:0002193,5.00e-37,108;UBERON:0002405,6.18e-36,93;UBERON:0001434,3.23e-33,100;UBERON:0002204,1.26e-18,167;UBERON:0003081,3.57e-18,203;UBERON:0000926,1.93e-10,315;UBERON:0004120,1.93e-10,315;UBERON:0006603,1.93e-10,315;UBERON:0002384,2.45e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0,0,0,0,0,7.75593571944628,3.00816671205213,3.25516306073778,0.223915474239924,0,0,0,0,0,2.55671940596253,1.23350366406548,3.09706370895104,0,0.256160706529101,0.47296445977717,21.0294865249337,13.5551783552603,12.1883837934908,0.376484679085209,0,1.12361742222542,20.8137046812214,13.4790191371959,24.9341479061626,0,0,0,17.1223450790865,9.64554881974938,13.0792672289071,0,0,0.217188844705117,21.1889825921679,18.0456041633907,32.5956259064111,0,0.425208599930087,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,1.8720341211139,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0,0,0,0,0,7.75593571944628,3.00816671205213,3.25516306073778,0.223915474239924,0,0,0,0,0,2.55671940596253,1.23350366406548,3.09706370895104,0,0.256160706529101,0.47296445977717,21.0294865249337,13.5551783552603,12.1883837934908,0.376484679085209,0,1.12361742222542,20.8137046812214,13.4790191371959,24.9341479061626,0,0,0,17.1223450790865,9.64554881974938,13.0792672289071,0,0,0.217188844705117,21.1889825921679,18.0456041633907,32.5956259064111,0,0.425208599930087,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,1.8720341211139,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@IL18 | |short_description=p5@IL18 | ||
}} | }} |
Latest revision as of 05:12, 25 September 2015
Short description: | p5@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IL18_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -277bp_to_ENST00000280357, NM_001243211, NM_001562, uc001pnb.1, uc009yym.1_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q14116Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-44 | 76 |
bone element | 3.95e-41 | 82 |
hematopoietic system | 4.18e-41 | 98 |
blood island | 4.18e-41 | 98 |
skeletal element | 3.15e-37 | 90 |
hemolymphoid system | 5.00e-37 | 108 |
immune system | 6.18e-36 | 93 |
skeletal system | 3.23e-33 | 100 |
musculoskeletal system | 1.26e-18 | 167 |
lateral plate mesoderm | 3.57e-18 | 203 |
mesoderm | 1.93e-10 | 315 |
mesoderm-derived structure | 1.93e-10 | 315 |
presumptive mesoderm | 1.93e-10 | 315 |
connective tissue | 2.45e-09 | 371 |