FFCP PHASE1:Hg19::chr10:104913215..104913221,-: Difference between revisions
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|id=chr10:104913215..104913221,-
|short_description=p16@NT5C2
|description=CAGE_peak_16_at_NT5C2_5end
|association_with_transcript=162bp_to_ENST00000423468,uc010qqp...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22978 | |EntrezGene=22978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8022 | |HGNC=8022 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z382 | |UniProt=B7Z382 | ||
|association_with_transcript=162bp_to_ENST00000423468,uc010qqp.1_5end | |||
|cluster_id=chr10:104913215..104913221,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_16_at_NT5C2_5end | |||
|id=chr10:104913215..104913221,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.55e-98;1!CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15!CL:0002321;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!4.73e-15!1;DOID:4549!4.73e-15!1;DOID:5861!4.73e-15!1;DOID:6496!4.73e-15!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0002135!6.22e-15!1;UBERON:0001301!1.61e-14!1;UBERON:0002046!1.09e-11!5;UBERON:0004117!1.09e-11!5;UBERON:0007689!1.09e-11!5;UBERON:0007123!1.09e-11!5;UBERON:0003091!1.09e-11!5;UBERON:0005157!5.24e-09!51;UBERON:0002133!4.09e-08!2;UBERON:0002360!5.02e-08!2;UBERON:0000094!5.02e-08!2;UBERON:0007645!5.02e-08!2;UBERON:0003127!9.19e-08!2;UBERON:0005911!2.58e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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|short_description=p16@NT5C2 | |||
}} | }} |
Latest revision as of 02:55, 16 September 2015
Short description: | p16@NT5C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NT5C2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 162bp_to_ENST00000423468, uc010qqp.1_5end |
EntrezGene: | NT5C2 |
HGNC: | 8022 |
UniProt: | B7Z382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |