FFCP PHASE1:Hg19::chr15:40531661..40531719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000560346_5end | |association_with_transcript=40bp_to_ENST00000560346_5end | ||
|cluster_id=chr15:40531661..40531719,+ | |||
|description=CAGE_peak_3_at_PAK6_5end | |description=CAGE_peak_3_at_PAK6_5end | ||
|id=chr15:40531661..40531719,+ | |id=chr15:40531661..40531719,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.52e-14!43;CL:0000223!4.36e-10!59;CL:0002368!6.48e-10!13;CL:0000066!3.42e-09!254;CL:0002159!3.73e-09!13;CL:0002251!3.80e-09!21 | |ontology_enrichment_celltype=CL:0002076!2.52e-14!43;CL:0000223!4.36e-10!59;CL:0002368!6.48e-10!13;CL:0000066!3.42e-09!254;CL:0002159!3.73e-09!13;CL:0002251!3.80e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.99e-15;14!CL:0002076;2.02e-15;42!CL:0002251;7.61e-15;20!CL:0000622;1.19e-10;5!CL:0002368;1.46e-10;13!CL:0000154;7.98e-09;6!CL:0002621;1.59e-08;3!CL:0002166;2.28e-08;3!CL:0002328;9.48e-08;3!CL:0002623;3.34e-07;3!CL:0000240;5.27e-07;6!CL:0000311;5.27e-07;6!CL:0000079;5.27e-07;6!CL:0000237;5.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.40e-19,42;CL:0000223,1.96e-15,58;CL:0002159,2.33e-15,14;CL:0002251,1.14e-14,20;CL:0000622,1.42e-10,5;CL:0002368,1.79e-10,13;CL:0000154,9.23e-09,6;CL:0002621,1.85e-08,3;CL:0002166,2.88e-08,3;CL:0002328,1.12e-07,3;CL:0000066,1.25e-07,253;CL:0002623,4.00e-07,3;CL:0000240,4.59e-07,6;CL:0000311,4.59e-07,6;CL:0000079,4.59e-07,6;CL:0000237,4.59e-07,6;CL:0000036,4.59e-07,6;CL:0000357,4.59e-07,6;CL:0000114,4.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;5.32e-09;58!UBERON:0006601;2.34e-08;82!CL:0000357;5.27e-07;6!CL:0000114;5.27e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.10e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.12e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.50e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.68e-30!41;UBERON:0001890!1.68e-30!41;UBERON:0006240!1.68e-30!41;UBERON:0003080!1.76e-29!42;UBERON:0000033!6.40e-28!123;UBERON:0001049!3.43e-27!57;UBERON:0005068!3.43e-27!57;UBERON:0006241!3.43e-27!57;UBERON:0007135!3.43e-27!57;UBERON:0000153!1.10e-26!129;UBERON:0007811!1.10e-26!129;UBERON:0001869!2.98e-26!32;UBERON:0001893!9.19e-26!34;UBERON:0002791!1.34e-24!33;UBERON:0002616!1.56e-24!59;UBERON:0000955!1.12e-23!69;UBERON:0006238!1.12e-23!69;UBERON:0007023!1.25e-23!115;UBERON:0002020!1.58e-23!34;UBERON:0003528!1.58e-23!34;UBERON:0004121!4.84e-23!169;UBERON:0001017!9.65e-23!82;UBERON:0005743!5.84e-22!86;UBERON:0000924!5.93e-22!173;UBERON:0006601!5.93e-22!173;UBERON:0002619!1.34e-21!22;UBERON:0003056!2.15e-20!61;UBERON:0001950!1.14e-19!20;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0003075!2.23e-18!86;UBERON:0007284!2.23e-18!86;UBERON:0000956!3.24e-18!25;UBERON:0000203!3.24e-18!25;UBERON:0002346!6.69e-17!90;UBERON:0000475!6.26e-13!365;UBERON:0000064!7.84e-13!219;UBERON:0000062!6.27e-10!511;UBERON:0002420!1.04e-09!9;UBERON:0007245!1.04e-09!9;UBERON:0010009!1.04e-09!9;UBERON:0010011!1.04e-09!9;UBERON:0000454!1.04e-09!9;UBERON:0004111!2.40e-09!241;UBERON:0000166!9.97e-09!21;UBERON:0001004!1.34e-08!72;UBERON:0000200!2.50e-08!6;UBERON:0001871!7.45e-08!7;UBERON:0000481!1.73e-07!347;UBERON:0000161!2.06e-07!35;UBERON:0009663!2.53e-07!7;UBERON:0000349!2.78e-07!5;UBERON:0000369!6.32e-07!4;UBERON:0002435!6.32e-07!4;UBERON:0000204!6.32e-07!4;UBERON:0010082!6.32e-07!4;UBERON:0000483!6.33e-07!309;UBERON:0001872!7.31e-07!5;UBERON:0003729!7.68e-07!5;UBERON:0002308!9.24e-07!9;UBERON:0000125!9.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.33e-33;32!UBERON:0001893;1.47e-30;34!UBERON:0002791;1.73e-30;32!UBERON:0002619;7.27e-30;22!UBERON:0001950;1.98e-29;20!UBERON:0003528;4.75e-28;34!UBERON:0002020;4.75e-28;34!UBERON:0002780;3.55e-27;41!UBERON:0001890;3.55e-27;41!UBERON:0000956;8.09e-26;25!UBERON:0000203;8.09e-26;25!UBERON:0000073;1.08e-15;53!UBERON:0002616;1.08e-15;53!UBERON:0000200;4.04e-14;6!UBERON:0002420;1.60e-13;9!UBERON:0007245;1.60e-13;9!UBERON:0010009;1.60e-13;9!UBERON:0010011;1.60e-13;9!UBERON:0000454;1.60e-13;9!UBERON:0001017;1.38e-11;75!UBERON:0000369;1.69e-11;4!UBERON:0002435;1.69e-11;4!UBERON:0000204;1.69e-11;4!UBERON:0000955;2.62e-11;68!UBERON:0009663;2.11e-09;7!UBERON:0005383;4.74e-09;3!UBERON:0005382;4.74e-09;3!UBERON:0001871;8.24e-09;6!UBERON:0003729;1.04e-08;13!UBERON:0000161;1.11e-08;19!UBERON:0000166;1.11e-08;19!UBERON:0001949;1.59e-08;3!UBERON:0000349;1.82e-08;5!UBERON:0011159;2.40e-08;5!UBERON:0000165;4.74e-08;28!UBERON:0001872;4.80e-08;5!UBERON:0002021;6.46e-08;5!UBERON:0004815;9.48e-08;3!UBERON:0002031;9.48e-08;3!UBERON:0001016;1.01e-07;83!UBERON:0001870;1.12e-07;3!UBERON:0000125;3.43e-07;9!UBERON:0002308;3.43e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.39e-38,41;UBERON:0001890,2.39e-38,41;UBERON:0003080,2.39e-38,41;UBERON:0006240,2.39e-38,41;UBERON:0001869,3.41e-37,32;UBERON:0001893,1.20e-34,34;UBERON:0002791,7.71e-34,32;UBERON:0003528,1.66e-31,34;UBERON:0002020,1.66e-31,34;UBERON:0002619,6.07e-30,22;UBERON:0010371,1.26e-29,104;UBERON:0001950,1.53e-29,20;UBERON:0000073,5.96e-28,53;UBERON:0002616,5.96e-28,53;UBERON:0003056,2.66e-27,61;UBERON:0001049,4.82e-26,56;UBERON:0005068,4.82e-26,56;UBERON:0006241,4.82e-26,56;UBERON:0007135,4.82e-26,56;UBERON:0000956,6.91e-26,25;UBERON:0000203,6.91e-26,25;UBERON:0004121,3.71e-25,171;UBERON:0000924,3.71e-25,171;UBERON:0006601,3.71e-25,171;UBERON:0000955,5.15e-23,68;UBERON:0006238,5.15e-23,68;UBERON:0001017,1.17e-19,81;UBERON:0003075,3.36e-18,82;UBERON:0007284,3.36e-18,82;UBERON:0002346,5.62e-17,86;UBERON:0001016,7.00e-17,89;UBERON:0007023,3.19e-16,114;UBERON:0000200,4.20e-14,6;UBERON:0011216,7.35e-14,223;UBERON:0010314,7.88e-14,132;UBERON:0002420,1.21e-13,9;UBERON:0007245,1.21e-13,9;UBERON:0010009,1.21e-13,9;UBERON:0010011,1.21e-13,9;UBERON:0000454,1.21e-13,9;UBERON:0000369,1.63e-11,4;UBERON:0002435,1.63e-11,4;UBERON:0000204,1.63e-11,4;UBERON:0010082,1.63e-11,4;UBERON:0009663,2.03e-09,7;UBERON:0005383,4.76e-09,3;UBERON:0005382,4.76e-09,3;UBERON:0001871,7.48e-09,6;UBERON:0000166,9.23e-09,22;UBERON:0003729,1.20e-08,13;UBERON:0000349,1.49e-08,5;UBERON:0001949,1.85e-08,3;UBERON:0011159,2.59e-08,5;UBERON:0000033,3.79e-08,56;UBERON:0001872,4.99e-08,5;UBERON:0002021,6.23e-08,5;UBERON:0000153,6.86e-08,62;UBERON:0007811,6.86e-08,62;UBERON:0001870,9.06e-08,3;UBERON:0004815,1.12e-07,3;UBERON:0002031,1.12e-07,3;UBERON:0000165,1.25e-07,29;UBERON:0000930,1.25e-07,29;UBERON:0003102,1.96e-07,99;UBERON:0001004,2.12e-07,74;UBERON:0000125,3.32e-07,9;UBERON:0002308,3.32e-07,9;UBERON:0004111,4.23e-07,240;UBERON:0000483,9.93e-07,306 | |||
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| ||
|short_description=p3@PAK6 | |short_description=p3@PAK6 | ||
}} | }} |
Latest revision as of 12:48, 17 September 2015
Short description: | p3@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000560346_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.40e-19 | 42 |
endodermal cell | 1.96e-15 | 58 |
general ecto-epithelial cell | 2.33e-15 | 14 |
epithelial cell of alimentary canal | 1.14e-14 | 20 |
acinar cell | 1.42e-10 | 5 |
respiratory epithelial cell | 1.79e-10 | 13 |
protein secreting cell | 9.23e-09 | 6 |
gingival epithelial cell | 1.85e-08 | 3 |
epithelial cell of Malassez | 2.88e-08 | 3 |
bronchial epithelial cell | 1.12e-07 | 3 |
epithelial cell | 1.25e-07 | 253 |
acinar cell of salivary gland | 4.00e-07 | 3 |
stratified squamous epithelial cell | 4.59e-07 | 6 |
keratin accumulating cell | 4.59e-07 | 6 |
stratified epithelial cell | 4.59e-07 | 6 |
keratinizing barrier epithelial cell | 4.59e-07 | 6 |
epithelial fate stem cell | 4.59e-07 | 6 |
stratified epithelial stem cell | 4.59e-07 | 6 |
surface ectodermal cell | 4.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.50e-09 | 14 |