FFCP PHASE1:Hg19::chr10:103543145..103543177,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:103543145..103543177,-
|short_description=p1@NPM3
|description=CAGE_peak_1_at_NPM3_5end
|association_with_transcript=0bp_to_ENST00000370110,NM_006993,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10360 | |EntrezGene=10360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7931 | |HGNC=7931 | ||
|TSSclassifier=strong | |||
|UniProt=O75607 | |UniProt=O75607 | ||
|association_with_transcript=0bp_to_ENST00000370110,NM_006993,uc001ktt.2_5end | |||
|cluster_id=chr10:103543145..103543177,- | |||
|description=CAGE_peak_1_at_NPM3_5end | |||
|id=chr10:103543145..103543177,- | |||
|ontology_enrichment_celltype=CL:0000066!1.74e-26!254;CL:0000012!1.75e-25!682;CL:0000548!4.76e-25!679;CL:0000004!4.76e-25!679;CL:0000255!4.76e-25!679;CL:0002321!8.07e-20!248;CL:0000220!4.35e-19!246;CL:0000003!8.86e-14!722;CL:0000144!6.67e-13!625;CL:0002371!6.99e-10!591;CL:0000063!1.58e-09!578;CL:0000222!4.86e-09!119;CL:0000055!4.82e-08!180;CL:0000076!5.30e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.19e-26,253;CL:0002321,1.95e-20,250;CL:0000222,1.55e-09,121;CL:0000076,4.79e-07,63;CL:0000393,5.12e-07,61;CL:0000211,5.12e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.78e-23!239;DOID:162!3.95e-23!235;DOID:2531!3.41e-13!51;DOID:0060083!3.41e-13!51;DOID:0050686!4.66e-13!137;DOID:1240!6.09e-11!39;DOID:0050687!1.00e-10!143;DOID:8692!1.14e-09!31;DOID:305!9.78e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.75e-09;31!DOID:1240;9.14e-09;39!DOID:2531;1.20e-08;51!DOID:0060083;1.20e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.78e-23,239;DOID:162,3.95e-23,235;DOID:2531,3.41e-13,51;DOID:0060083,3.41e-13,51;DOID:0050686,4.66e-13,137;DOID:1240,6.09e-11,39;DOID:0050687,1.00e-10,143;DOID:8692,1.14e-09,31;DOID:305,9.78e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!8.39e-12!238;UBERON:0009142!8.39e-12!238;UBERON:0002100!1.22e-07!216;UBERON:0005256!1.61e-07!143;UBERON:0000490!2.58e-07!138;UBERON:0000486!5.78e-07!82;UBERON:0003914!7.89e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.21e-09,148;UBERON:0003104,1.33e-08,160;UBERON:0009142,1.33e-08,160;UBERON:0002100,2.74e-08,199;UBERON:0007503,3.92e-08,78;UBERON:0000486,3.10e-07,83 | |||
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| ||
|short_description=p1@NPM3 | |||
}} | }} |
Latest revision as of 23:29, 15 September 2015
Short description: | p1@NPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370110, NM_006993, uc001ktt.2_5end |
EntrezGene: | NPM3 |
HGNC: | 7931 |
UniProt: | O75607 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.19e-26 | 253 |
embryonic cell | 1.95e-20 | 250 |
mesodermal cell | 1.55e-09 | 121 |
squamous epithelial cell | 4.79e-07 | 63 |
electrically responsive cell | 5.12e-07 | 61 |
electrically active cell | 5.12e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.21e-09 | 148 |
mesenchyme | 1.33e-08 | 160 |
entire embryonic mesenchyme | 1.33e-08 | 160 |
trunk | 2.74e-08 | 199 |
epithelial vesicle | 3.92e-08 | 78 |
multilaminar epithelium | 3.10e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.78e-23 | 239 |
cancer | 3.95e-23 | 235 |
hematologic cancer | 3.41e-13 | 51 |
immune system cancer | 3.41e-13 | 51 |
organ system cancer | 4.66e-13 | 137 |
leukemia | 6.09e-11 | 39 |
cell type cancer | 1.00e-10 | 143 |
myeloid leukemia | 1.14e-09 | 31 |
carcinoma | 9.78e-09 | 106 |