FFCP PHASE1:Hg19::chr15:39486372..39486387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000560743_5end | |association_with_transcript=122bp_to_ENST00000560743_5end | ||
|cluster_id=chr15:39486372..39486387,- | |||
|coexpression_cluster_id=C878 | |||
|description=CAGE_peak_4_at_ENST00000560743_5end | |description=CAGE_peak_4_at_ENST00000560743_5end | ||
|id=chr15:39486372..39486387,- | |id=chr15:39486372..39486387,- | ||
|ontology_enrichment_celltype=CL:0002620!6.56e-28!23;CL:0000057!6.04e-22!75;CL:0002580!1.55e-12!3;CL:0002615!2.53e-12!3;CL:0000055!2.57e-12!180;CL:0000197!1.23e-09!6;CL:0000098!1.23e-09!6;CL:0002167!1.23e-09!6;CL:0002617!5.85e-09!2;CL:0000136!7.97e-09!15;CL:0002334!9.09e-08!12 | |ontology_enrichment_celltype=CL:0002620!6.56e-28!23;CL:0000057!6.04e-22!75;CL:0002580!1.55e-12!3;CL:0002615!2.53e-12!3;CL:0000055!2.57e-12!180;CL:0000197!1.23e-09!6;CL:0000098!1.23e-09!6;CL:0002167!1.23e-09!6;CL:0002617!5.85e-09!2;CL:0000136!7.97e-09!15;CL:0002334!9.09e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.43e-31;3!CL:0002615;2.35e-30;3!CL:0000136;1.89e-27;13!CL:0002617;2.55e-21;2!CL:0002620;3.67e-15;23!CL:0002334;7.49e-14;12!CL:0002616;1.12e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,4.91e-31,3;CL:0002615,1.83e-30,3;CL:0000136,7.76e-24,15;CL:0002617,2.08e-21,2;CL:0002620,3.58e-15,23;CL:0000057,2.80e-14,76;CL:0002334,7.25e-14,12;CL:0002616,1.06e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.21e-12!5;DOID:450!2.21e-12!5;DOID:66!2.21e-12!5;DOID:423!2.21e-12!5;DOID:0080000!2.21e-12!5;DOID:11722!2.21e-12!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.05e-18;5!DOID:450;2.05e-18;5!DOID:66;2.05e-18;5!DOID:423;2.05e-18;5!DOID:0080000;2.05e-18;5!DOID:11722;2.05e-18;5!DOID:2513;4.01e-11;1!DOID:3571;4.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.88e-18,5;DOID:450,1.88e-18,5;DOID:66,1.88e-18,5;DOID:423,1.88e-18,5;DOID:0080000,1.88e-18,5;DOID:11722,1.88e-18,5;DOID:2513,3.63e-11,1;DOID:3571,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.63e-19!40;UBERON:0002199!6.57e-17!45;UBERON:0002416!6.57e-17!45;UBERON:0003688!9.60e-16!6;UBERON:0002358!9.60e-16!6;UBERON:0003684!9.60e-16!6;UBERON:0001178!9.60e-16!6;UBERON:0000310!1.10e-09!10;UBERON:0001443!9.11e-09!11;UBERON:0003102!5.32e-08!95;UBERON:0004457!1.10e-07!12;UBERON:0000042!1.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.41e-27;6!UBERON:0002358;5.41e-27;6!UBERON:0003684;5.41e-27;6!UBERON:0001178;5.41e-27;6!UBERON:0000310;2.85e-25;10!UBERON:0001443;5.64e-23;11!UBERON:0004457;4.18e-18;9!UBERON:0000042;4.18e-18;9!UBERON:0002097;5.18e-10;41!UBERON:0002199;6.95e-10;46!UBERON:0002416;6.95e-10;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.58e-27,6;UBERON:0002358,4.58e-27,6;UBERON:0003684,4.58e-27,6;UBERON:0001178,4.58e-27,6;UBERON:0000310,2.45e-25,10;UBERON:0001443,4.93e-23,11;UBERON:0004457,1.11e-13,12;UBERON:0000042,1.11e-13,12;UBERON:0002097,3.51e-11,41;UBERON:0002199,6.85e-10,46;UBERON:0002416,6.85e-10,46;UBERON:0009569,3.49e-09,112 | |||
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|phase1_expression=3.81524596468169,3.8538094300377,1.40954404095971,4.00293193412522,1.78784437770915,4.36169262050184,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0,0,1.79389635688862,3.41691822109708,1.27159140695737,0,0.515262646192195,3.09168648054755,2.04728541964749,0.337552664482532,1.55899208257918,0.757301322732344,0.736399189138395,0.323292113637624,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,1.28855556491985,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,11.9700339164689,2.52594084989766,0.256278298511402,8.18731598506726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENST00000560743 | |short_description=p4@ENST00000560743 | ||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p4@ENST00000560743 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000560743_5end |
Coexpression cluster: | C878_Preadipocyte_Adipocyte_Mast_CD14_CD8_CD4_Fibroblast |
Association with transcript: | 122bp_to_ENST00000560743_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 4.91e-31 | 3 |
adipocyte of omentum tissue | 1.83e-30 | 3 |
fat cell | 7.76e-24 | 15 |
adipocyte of breast | 2.08e-21 | 2 |
skin fibroblast | 3.58e-15 | 23 |
fibroblast | 2.80e-14 | 76 |
preadipocyte | 7.25e-14 | 12 |
perirenal adipocyte cell | 1.06e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.58e-27 | 6 |
peritoneum | 4.58e-27 | 6 |
abdominal cavity | 4.58e-27 | 6 |
visceral peritoneum | 4.58e-27 | 6 |
breast | 2.45e-25 | 10 |
chest | 4.93e-23 | 11 |
cavity lining | 1.11e-13 | 12 |
serous membrane | 1.11e-13 | 12 |
skin of body | 3.51e-11 | 41 |
integument | 6.85e-10 | 46 |
integumental system | 6.85e-10 | 46 |
subdivision of trunk | 3.49e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.88e-18 | 5 |
myotonic disease | 1.88e-18 | 5 |
muscle tissue disease | 1.88e-18 | 5 |
myopathy | 1.88e-18 | 5 |
muscular disease | 1.88e-18 | 5 |
myotonic dystrophy | 1.88e-18 | 5 |
basal cell carcinoma | 3.63e-11 | 1 |
liver cancer | 5.43e-11 | 1 |