FFCP PHASE1:Hg19::chr10:99446927..99446938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60370 | |EntrezGene=60370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |HGNC=30898 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |UniProt=Q5T686 | ||
|association_with_transcript=76bp_to_NM_021732,uc001koi.2_5end | |association_with_transcript=76bp_to_NM_021732,uc001koi.2_5end | ||
|cluster_id=chr10:99446927..99446938,- | |||
|description=CAGE_peak_4_at_AVPI1_5end | |description=CAGE_peak_4_at_AVPI1_5end | ||
|id=chr10:99446927..99446938,- | |id=chr10:99446927..99446938,- | ||
|ontology_enrichment_celltype=CL:0000066!5.36e-15!254;CL:0000223!9.53e-09!59;CL:0002076!6.27e-07!43 | |ontology_enrichment_celltype=CL:0000066!5.36e-15!254;CL:0000223!9.53e-09!59;CL:0002076!6.27e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-15,253;CL:0000223,3.22e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.33e-12!106;DOID:0050687!3.14e-08!143 | |ontology_enrichment_disease=DOID:305!6.33e-12!106;DOID:0050687!3.14e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.39e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.12e-15!169;UBERON:0000925!5.12e-15!169;UBERON:0006595!5.12e-15!169;UBERON:0001007!2.70e-12!155;UBERON:0001555!2.70e-12!155;UBERON:0007026!2.70e-12!155;UBERON:0000077!1.81e-11!130;UBERON:0004921!1.99e-10!129;UBERON:0004185!1.99e-10!129;UBERON:0000062!2.74e-09!511;UBERON:0001041!1.46e-08!98;UBERON:0001048!9.61e-08!168;UBERON:0001737!1.23e-07!9;UBERON:0008947!2.16e-07!38;UBERON:0003258!2.16e-07!38;UBERON:0003104!5.76e-07!238;UBERON:0009142!5.76e-07!238;UBERON:0001004!5.95e-07!72;UBERON:0000481!6.36e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.75e-11;9!UBERON:0001557;2.75e-11;9!UBERON:0000072;1.75e-08;37!UBERON:0000065;1.01e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.49e-12,160;UBERON:0000925,1.49e-12,160;UBERON:0006595,1.49e-12,160;UBERON:0001737,3.26e-11,9;UBERON:0001007,7.31e-10,145;UBERON:0001555,7.31e-10,145;UBERON:0007026,7.31e-10,145;UBERON:0004921,5.27e-09,118;UBERON:0001004,1.67e-08,74;UBERON:0001041,2.70e-08,87;UBERON:0008947,7.90e-08,38;UBERON:0003258,7.90e-08,38 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.986680828671798,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.783556884599516,0.982935746006035,4.18680700783456,0.873765488520689,2.63766978228454,1.11389717664042,1.98838425436749,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0.383829398097213,1.85779347979291,0,1.50602959389125,2.9580320813343,0,0,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0.223915474239924,0.32389366601898,0,1.16318591023652,0.377875943688809,0.727752183563449,1.62700325833979,0.822335776043652,1.54853185447552,0,0,0,0.689491361473237,1.29096936716765,1.35426486594342,0.752969358170419,0.272906150057846,1.12361742222542,0.612167784741805,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,1.12328631146495,0.750884464207532,0,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0.393419540227666,0.393010762749165,1.02800749499755,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0.639312809217652,0.722878304769133,2.00535164254356,2.462390822334,0,3.40644409211845,0.0945348171640679,0.665188192387692,0.175669571386252,0.851363990735132,3.64295288292542,3.33705998505986,0.324547393654683,1.0447784237956,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,1.49091585508596,0.379891534993739,0.397227542439656,1.14734648299525,1.77334191099179,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,2.10889288650417,0.936480230490962,0,1.04614076386261,0,0,0,1.02077085627447,0.61417158655884,1.44656093646072,2.37600571456411,1.7308685049499,0,0,0.168336113954066,0.500474079487857,0,0,0.919463387397059,1.80285670687916,0.226864366320042,1.61450672119976,0.85422955527427,0.635795703478686,0.900273288253207,0.824420233907511,2.83404594050192,0.930584281657949,0.506328996723799,0.487185025805993,1.26216887122057,0.828449087780694,0.969876340912871,0.710019185033229,0.906768884048762,1.52604533079439,0.966304265816484,0.272746120590835,1.72082757233402,0.365921118388786,0.662648841607426,0.929551542956147,0.207322110030741,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.928735856063958,1.44375896333917,7.45332840251016,6.23763353288976,3.37415441836875,6.61763836394364,7.84365998732662,6.64357733511071,5.93257755904723,5.29797955838434,4.23221872641029,0,0,0,1.47008711385542,0,0.982827216677626,1.77236972004421,0,0.491953754172454,0.514703430895577,0.98775256867763,1.1240175325762,1.3068766413512,0.740707561268237,2.93227474779292,1.03993478527958,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.503946384596579,0.283550194484773,1.88072897675981,1.74380363108377,2.68367875415648,0,0,0.621984346622316,0.144119953416961,0.25248486685276,0.825472625798197,3.81988425558278,0,1.71072446022705,1.02827492703324,3.90445975197093,0.857479297891735,0.336393253036082,0.43596006883328,0.22001485746285,0.646358578788889,3.57656445851882,0,0.797814349754612,2.08014873822732,0.514414748524284,0,0,0.142977993658148,5.42621605391443,0,0,0.355391948742546,0.791951872933429,2.41151501647669,0,0.699810938274399,0,1.00451418286425,0,0,2.29723871668228,0,0.579125226670317,0.410952645100767,0.537182889719687,0,1.18218456121156,0.431255149719035,0.77005821767849,0,0,0,0.167516265334349,0,0.749007023947182,0,0,1.10422342547226,0.500170521059677,1.62759014219841,1.45579603071565,1.24900292158013,2.20783381047509,1.28855556491985,1.20378439891088,0,3.10419213877515,0.664225598535437,1.47495334833363,0.955719759148911,0.391602314925481,0.686286847621712,0.620304078368662,0.431428401637234,0.640365346820666,4.54691357169389,3.32870879020994,0.604780586659361,2.23297027036899,0.920771839728375,0.561320188866147,1.40953064181271,0.511707249066704,0.160853921143607,4.45254199334973,0.154209693802656,0,0.410635780069046,1.03850885836724,0.348631135379878,1.20859449591622,1.20303882181971,3.31491560169227,1.14814448164607,1.0925470080403,1.96686622439136,1.35359883872224,0.847168708148562,1.56869953835371,0,0.422206515571503,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,0,1.01950509218015,1.66215201785745,1.34324852833307,0,0,1.28225062558195,1.64007322849853,1.62689197332152,0.721287081534056,0.183138929636687,0.330037999682352,1.14853107599234,1.95018073810956,0,0.48335359146061,0.770243085573222,0.921022048356777,0.413509717453592,0.537101224341368,0.435050081742686,0.255679882248303,0,1.15699440752685,0.768760269460425,1.14851441245126,0.2023155617111,0.464845549297286,0.31481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| ||
|short_description=p4@AVPI1 | |short_description=p4@AVPI1 | ||
}} | }} |
Latest revision as of 06:56, 20 September 2015
Short description: | p4@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-15 | 253 |
endodermal cell | 3.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.49e-12 | 160 |
endoderm | 1.49e-12 | 160 |
presumptive endoderm | 1.49e-12 | 160 |
larynx | 3.26e-11 | 9 |
digestive system | 7.31e-10 | 145 |
digestive tract | 7.31e-10 | 145 |
primitive gut | 7.31e-10 | 145 |
subdivision of digestive tract | 5.27e-09 | 118 |
respiratory system | 1.67e-08 | 74 |
foregut | 2.70e-08 | 87 |
respiratory primordium | 7.90e-08 | 38 |
endoderm of foregut | 7.90e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.39e-10 | 106 |