FFCP PHASE1:Mm9::chr7:104937295..104937344,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18479 | |EntrezGene=18479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1361 | |||
|TSSclassifier=NA | |||
|UniProt=G3XA44,Q9R2B2 | |UniProt=G3XA44,Q9R2B2 | ||
|association_with_transcript=244bp_to_ENSMUST00000172423,uc009iju.1_5end | |association_with_transcript=244bp_to_ENSMUST00000172423,uc009iju.1_5end | ||
|cluster_id=chr7:104937295..104937344,+ | |||
|description=CAGE_peak_5_at_Pak1_5end | |description=CAGE_peak_5_at_Pak1_5end | ||
|id=chr7:104937295..104937344,+ | |id=chr7:104937295..104937344,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.13e-09!70;CL:0000220!1.13e-09!70;CL:0002076!3.48e-09!15 | |ontology_enrichment_celltype=CL:0002321!1.13e-09!70;CL:0000220!1.13e-09!70;CL:0002076!3.48e-09!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.64e-10,70;CL:0002076,1.25e-09,15;CL:0000066,1.29e-07,25;CL:0002563,9.72e-07,9;CL:0002251,9.72e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.07e-15!75;UBERON:0001016!3.07e-15!75;UBERON:0001017!7.41e-15!73;UBERON:0005743!7.41e-15!73;UBERON:0000955!4.74e-14!50;UBERON:0006238!4.74e-14!50;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002616!1.96e-13!49;UBERON:0004121!2.47e-13!102;UBERON:0000924!2.47e-13!102;UBERON:0006601!2.47e-13!102;UBERON:0000033!2.72e-12!63;UBERON:0003080!5.14e-11!40;UBERON:0002780!1.79e-10!39;UBERON:0001890!1.79e-10!39;UBERON:0006240!1.79e-10!39;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002020!9.49e-10!34;UBERON:0000344!1.07e-09!15;UBERON:0003056!5.85e-09!49;UBERON:0002791!6.80e-09!29;UBERON:0003528!6.80e-09!29;UBERON:0001893!6.80e-09!29;UBERON:0001242!9.02e-09!13;UBERON:0000060!9.02e-09!13;UBERON:0001262!9.02e-09!13;UBERON:0004786!9.02e-09!13;UBERON:0000064!2.11e-08!99;UBERON:0000160!5.84e-08!43;UBERON:0000485!3.41e-07!11 | |ontology_enrichment_uberon=UBERON:0000073!3.07e-15!75;UBERON:0001016!3.07e-15!75;UBERON:0001017!7.41e-15!73;UBERON:0005743!7.41e-15!73;UBERON:0000955!4.74e-14!50;UBERON:0006238!4.74e-14!50;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002616!1.96e-13!49;UBERON:0004121!2.47e-13!102;UBERON:0000924!2.47e-13!102;UBERON:0006601!2.47e-13!102;UBERON:0000033!2.72e-12!63;UBERON:0003080!5.14e-11!40;UBERON:0002780!1.79e-10!39;UBERON:0001890!1.79e-10!39;UBERON:0006240!1.79e-10!39;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002020!9.49e-10!34;UBERON:0000344!1.07e-09!15;UBERON:0003056!5.85e-09!49;UBERON:0002791!6.80e-09!29;UBERON:0003528!6.80e-09!29;UBERON:0001893!6.80e-09!29;UBERON:0001242!9.02e-09!13;UBERON:0000060!9.02e-09!13;UBERON:0001262!9.02e-09!13;UBERON:0004786!9.02e-09!13;UBERON:0000064!2.11e-08!99;UBERON:0000160!5.84e-08!43;UBERON:0000485!3.41e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-15,75;UBERON:0000073,1.30e-14,54;UBERON:0001017,1.37e-14,73;UBERON:0001049,5.75e-14,52;UBERON:0005068,5.75e-14,52;UBERON:0006241,5.75e-14,52;UBERON:0007135,5.75e-14,52;UBERON:0000955,4.38e-13,47;UBERON:0006238,4.38e-13,47;UBERON:0004121,8.87e-13,95;UBERON:0000924,8.87e-13,95;UBERON:0006601,8.87e-13,95;UBERON:0002616,1.87e-12,46;UBERON:0000160,2.36e-12,31;UBERON:0003080,3.05e-11,40;UBERON:0010371,5.00e-11,73;UBERON:0002346,9.04e-11,64;UBERON:0003075,9.04e-11,64;UBERON:0007284,9.04e-11,64;UBERON:0002780,1.13e-10,39;UBERON:0001890,1.13e-10,39;UBERON:0006240,1.13e-10,39;UBERON:0002020,3.16e-10,34;UBERON:0000344,3.60e-10,15;UBERON:0011216,1.85e-09,194;UBERON:0003528,2.54e-09,29;UBERON:0002791,2.54e-09,29;UBERON:0001893,2.54e-09,29;UBERON:0001242,3.42e-09,13;UBERON:0001262,3.42e-09,13;UBERON:0004786,3.42e-09,13;UBERON:0003056,1.28e-08,49;UBERON:0005409,5.22e-08,47;UBERON:0000485,1.59e-07,11;UBERON:0002619,9.12e-07,17;UBERON:0003350,9.72e-07,9;UBERON:0004808,9.72e-07,9;UBERON:0001277,9.72e-07,9 | |||
|phase1_expression=3.84357233051505,18.1467211972468,24.1149596876454,27.2217790176147,25.5456822272637,10.2406355866253,9.34450562382103,0.129123323441576,1.54867594366833,2.34064526321993,0,0.159544317990673,0.171200729931206,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,2.46625541438102,0.198581902401771,0,6.55968933452967,4.35877634027623,17.8011908875656,15.0766698655676,9.9116767035509,7.41091335879858,7.56090389279792,6.65191531965914,0,0,0,4.62162591602039,3.82339684324532,3.06254034393554,0.837063261473815,1.5626706890476,0.523523743973798,2.94115744015507,1.36609096991689,2.42755176515577,2.01434908760924,1.92616169317078,4.40512205188036,0.782391344348039,4.57852828398938,5.05278220289285,4.08302788055995,2.2397827460058,4.31257693094915,0,0,0,2.57259436035947,0.573066879877513,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,0.384218305321555,1.24427534770173,1.21505344498522,1.26194976810829,2.57085885963423,2.87129103237098,2.57230678351403,2.20444583341944,2.75765635983006,2.20231761998777,4.59674417106676,5.52983519722476,2.63772575460388,2.8361169516747,4.16730696445408,4.74611098302348,3.37657566019008,5.65353516774197,3.24091444021034,1.85083185038834,1.86399445825301,2.27178579999552,2.19157524309678,0.579728977403356,0,0,0,0,0,1.54488862144927,8.01022516116871,8.05336614268893,6.00677276667578,4.64783285263046,7.69958864485907,5.09610479413291,28.4426681261332,3.68034769719064,3.54703811665138,4.04419556011827,3.53970027129086,1.8125651855302,2.07818994690755,0.867426633830679,0.608930956624282,0.922461989024234,0.904335843315735,1.52865319276416,3.01599819191221,2.71914464507811,0.144599356919912,0,1.7794353494215,0.662524555381181,1.45462575940567,7.45567044872489,2.04946557908083,3.14170060220183,5.10914110417183,1.31796636956512,1.19980546198682,0.508280908292259,7.48953197024113,4.11750542536764,3.64397621127307,9.03886464999838,7.41574826257959,4.77912502486988,5.67844420737152,0.407357455401265,1.61729061793121,1.76905930903572,1.47309299120532,1.82168620147785,1.60931473103431,0.900310649026746,1.05493372485001,1.2246569847239,0.768682321709099,0.655912071918102,1.55222022443409,1.94011193639558,1.89106080167819,1.23165786914764,1.09597866213787,1.11218899690239,1.39300866608867,0.823128545631774,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,1.89260953707715,2.77842453424068,8.59088835757875,2.3800550999719,1.91959425481711,2.55460339046482,1.03093969057675,2.21851877085677,2.2237804384487,2.09248188723815,6.64340686162316,2.9645811850322,1.25667604400135,1.79060824837036,2.9244613067868,2.69645822596266,6.91641759599022,6.17337947088538,1.51734320762465,1.37098215131675,0,1.83286195060783,1.55161989734101,1.8936671370386,2.02356918797623,1.77132177575523,2.35498091762062,2.09775178667061,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.241177159752417,0.25462585178142,1.72617682470486,0.972811360650212,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,1.32643988239339,1.46668478797823,2.03694102930226,2.11221223459652,1.84256883185997,2.61848004974615,2.53673742215138,0.945810864637146,0.664394068946325,0.956728611944923,0.81931657357869,0.345369963731791,1.44649058581512,0,1.63171705145613,0.983528546038072,0.827810238914197,5.29816946959713,6.68106613575558,4.91804836130026,0.252470927204373,2.2085575359138,0.390438744296638,1.29254038639679,1.19484398976276,0.891194696329576,2.26461224631066,2.02405350837447,1.46127928955656,0.790575555893047,12.2102100240287,0.851640511249612,0.534196811001766,1.30309567482861,0.329940245945071,0,1.94224508923985,2.11626489875326,1.32023555829129,1.18120757152309,0.922305443831782,1.55056975900933,1.81766864738753,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,2.38307724027652,2.52085531643834,1.81102157295856,3.85806663056866,2.6601035046341,1.60531935841864,0.987294123612726,2.43571959291679,0.23467170806371,0.42366414172764,0.661585194164886,2.63818004706368,1.45317984026315,1.32688434841943,2.38744688006273,2.46211349617592,2.91480836629851,5.00648315428376,0.512612642393558,1.03193433981611,0.740778109478847,0,0.27338845544205,0.228778173206523,0.849892149969277,1.25956307091292,0.552799895217695,0,1.89801596148681,1.62655573701479,2.70013352054503,1.67270636811575,2.18362563746178,1.07891477107857,1.65306911450672,1.30877970992015,4.79575401179634,1.86401793926078,2.81846469342095,1.04661582230785,0.827292452285488,1.36115831840833,1.03327858782185,1.18269287843545,0.938857909166032,1.0416350787516,1.78260885523708,1.44950472495604,0.576060012515731,0.316011120628178,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0.680191150845634,0,0.448569283047378,0.839423081820392,1.35232715822533,0.563047426353546,0.549454872801795,1.2862102744744,0,3.95326289831947,3.22227665555024,1.71868654031819,2.06223818812425,4.7955776383945,6.0431511791176,4.05013500139084,5.85417564191487,8.15656336171568,6.21312374102184,2.49089634202024,2.79317411380722,1.02440163452481,1.21553358534147,0.838452650511929,1.65459157605013,0.666740183404846,1.03017528619447,1.92551525755089,1.76888048234658,0.760437899670719,0.754505365544305,1.31098110457835,1.28050304809739,1.55075766180156,1.90517476513229,1.15884325944855,1.54327376370964,1.64834360321323,1.17759136107518,0.342869252385415,1.59728225543404,1.1921809497366,1.0174249164263,1.41164070622996,1.4384483341585,1.28049581010941,0.789209134313529,1.7654534799962,2.24456908663095,1.30498519936592,1.47756723563345,0,1.70430525304563,0.771626443924566,0.249810577937946,1.40358965067245,0,1.53030665655075,0.882365676478062,0.695603506861264 | |phase1_expression=3.84357233051505,18.1467211972468,24.1149596876454,27.2217790176147,25.5456822272637,10.2406355866253,9.34450562382103,0.129123323441576,1.54867594366833,2.34064526321993,0,0.159544317990673,0.171200729931206,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,2.46625541438102,0.198581902401771,0,6.55968933452967,4.35877634027623,17.8011908875656,15.0766698655676,9.9116767035509,7.41091335879858,7.56090389279792,6.65191531965914,0,0,0,4.62162591602039,3.82339684324532,3.06254034393554,0.837063261473815,1.5626706890476,0.523523743973798,2.94115744015507,1.36609096991689,2.42755176515577,2.01434908760924,1.92616169317078,4.40512205188036,0.782391344348039,4.57852828398938,5.05278220289285,4.08302788055995,2.2397827460058,4.31257693094915,0,0,0,2.57259436035947,0.573066879877513,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,0.384218305321555,1.24427534770173,1.21505344498522,1.26194976810829,2.57085885963423,2.87129103237098,2.57230678351403,2.20444583341944,2.75765635983006,2.20231761998777,4.59674417106676,5.52983519722476,2.63772575460388,2.8361169516747,4.16730696445408,4.74611098302348,3.37657566019008,5.65353516774197,3.24091444021034,1.85083185038834,1.86399445825301,2.27178579999552,2.19157524309678,0.579728977403356,0,0,0,0,0,1.54488862144927,8.01022516116871,8.05336614268893,6.00677276667578,4.64783285263046,7.69958864485907,5.09610479413291,28.4426681261332,3.68034769719064,3.54703811665138,4.04419556011827,3.53970027129086,1.8125651855302,2.07818994690755,0.867426633830679,0.608930956624282,0.922461989024234,0.904335843315735,1.52865319276416,3.01599819191221,2.71914464507811,0.144599356919912,0,1.7794353494215,0.662524555381181,1.45462575940567,7.45567044872489,2.04946557908083,3.14170060220183,5.10914110417183,1.31796636956512,1.19980546198682,0.508280908292259,7.48953197024113,4.11750542536764,3.64397621127307,9.03886464999838,7.41574826257959,4.77912502486988,5.67844420737152,0.407357455401265,1.61729061793121,1.76905930903572,1.47309299120532,1.82168620147785,1.60931473103431,0.900310649026746,1.05493372485001,1.2246569847239,0.768682321709099,0.655912071918102,1.55222022443409,1.94011193639558,1.89106080167819,1.23165786914764,1.09597866213787,1.11218899690239,1.39300866608867,0.823128545631774,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,1.89260953707715,2.77842453424068,8.59088835757875,2.3800550999719,1.91959425481711,2.55460339046482,1.03093969057675,2.21851877085677,2.2237804384487,2.09248188723815,6.64340686162316,2.9645811850322,1.25667604400135,1.79060824837036,2.9244613067868,2.69645822596266,6.91641759599022,6.17337947088538,1.51734320762465,1.37098215131675,0,1.83286195060783,1.55161989734101,1.8936671370386,2.02356918797623,1.77132177575523,2.35498091762062,2.09775178667061,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.241177159752417,0.25462585178142,1.72617682470486,0.972811360650212,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,1.32643988239339,1.46668478797823,2.03694102930226,2.11221223459652,1.84256883185997,2.61848004974615,2.53673742215138,0.945810864637146,0.664394068946325,0.956728611944923,0.81931657357869,0.345369963731791,1.44649058581512,0,1.63171705145613,0.983528546038072,0.827810238914197,5.29816946959713,6.68106613575558,4.91804836130026,0.252470927204373,2.2085575359138,0.390438744296638,1.29254038639679,1.19484398976276,0.891194696329576,2.26461224631066,2.02405350837447,1.46127928955656,0.790575555893047,12.2102100240287,0.851640511249612,0.534196811001766,1.30309567482861,0.329940245945071,0,1.94224508923985,2.11626489875326,1.32023555829129,1.18120757152309,0.922305443831782,1.55056975900933,1.81766864738753,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,2.38307724027652,2.52085531643834,1.81102157295856,3.85806663056866,2.6601035046341,1.60531935841864,0.987294123612726,2.43571959291679,0.23467170806371,0.42366414172764,0.661585194164886,2.63818004706368,1.45317984026315,1.32688434841943,2.38744688006273,2.46211349617592,2.91480836629851,5.00648315428376,0.512612642393558,1.03193433981611,0.740778109478847,0,0.27338845544205,0.228778173206523,0.849892149969277,1.25956307091292,0.552799895217695,0,1.89801596148681,1.62655573701479,2.70013352054503,1.67270636811575,2.18362563746178,1.07891477107857,1.65306911450672,1.30877970992015,4.79575401179634,1.86401793926078,2.81846469342095,1.04661582230785,0.827292452285488,1.36115831840833,1.03327858782185,1.18269287843545,0.938857909166032,1.0416350787516,1.78260885523708,1.44950472495604,0.576060012515731,0.316011120628178,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0.680191150845634,0,0.448569283047378,0.839423081820392,1.35232715822533,0.563047426353546,0.549454872801795,1.2862102744744,0,3.95326289831947,3.22227665555024,1.71868654031819,2.06223818812425,4.7955776383945,6.0431511791176,4.05013500139084,5.85417564191487,8.15656336171568,6.21312374102184,2.49089634202024,2.79317411380722,1.02440163452481,1.21553358534147,0.838452650511929,1.65459157605013,0.666740183404846,1.03017528619447,1.92551525755089,1.76888048234658,0.760437899670719,0.754505365544305,1.31098110457835,1.28050304809739,1.55075766180156,1.90517476513229,1.15884325944855,1.54327376370964,1.64834360321323,1.17759136107518,0.342869252385415,1.59728225543404,1.1921809497366,1.0174249164263,1.41164070622996,1.4384483341585,1.28049581010941,0.789209134313529,1.7654534799962,2.24456908663095,1.30498519936592,1.47756723563345,0,1.70430525304563,0.771626443924566,0.249810577937946,1.40358965067245,0,1.53030665655075,0.882365676478062,0.695603506861264 | ||
|short_description=p5@Pak1 | |short_description=p5@Pak1 | ||
}} | }} |
Latest revision as of 13:44, 25 September 2015
Short description: | p5@Pak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1361 |
Association with transcript: | 244bp_to_ENSMUST00000172423, uc009iju.1_5end |
EntrezGene: | Pak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.64e-10 | 70 |
endo-epithelial cell | 1.25e-09 | 15 |
epithelial cell | 1.29e-07 | 25 |
intestinal epithelial cell | 9.72e-07 | 9 |
epithelial cell of alimentary canal | 9.72e-07 | 9 |