FFCP PHASE1:Mm9::chr6:8899812..8899830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18231 | |EntrezGene=18231 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q61200 | |UniProt=Q61200 | ||
|association_with_transcript=136bp_to_ENSMUST00000060369_5end | |association_with_transcript=136bp_to_ENSMUST00000060369_5end | ||
|cluster_id=chr6:8899812..8899830,+ | |||
|description=CAGE_peak_1_at_Nxph1_5end | |description=CAGE_peak_1_at_Nxph1_5end | ||
|id=chr6:8899812..8899830,+ | |id=chr6:8899812..8899830,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.36e-15!23;CL:0000337!3.36e-15!23;CL:0000540!4.35e-08!33;CL:0000047!4.35e-08!33;CL:0000031!4.35e-08!33;CL:0000404!4.35e-08!33;CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39 | |ontology_enrichment_celltype=CL:0000117!3.36e-15!23;CL:0000337!3.36e-15!23;CL:0000540!4.35e-08!33;CL:0000047!4.35e-08!33;CL:0000031!4.35e-08!33;CL:0000404!4.35e-08!33;CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.48e-25,23;CL:0000337,8.48e-25,23;CL:0000540,2.73e-15,33;CL:0000047,2.73e-15,33;CL:0000031,2.73e-15,33;CL:0000404,2.73e-15,33;CL:0000393,5.68e-12,39;CL:0000211,5.68e-12,39;CL:0002319,2.71e-10,43;CL:0000221,6.35e-10,44;CL:0000133,6.35e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-20!52;UBERON:0005068!1.75e-20!52;UBERON:0006241!1.75e-20!52;UBERON:0007135!1.75e-20!52;UBERON:0002020!4.50e-20!34;UBERON:0000955!8.73e-20!50;UBERON:0006238!8.73e-20!50;UBERON:0002616!5.98e-19!49;UBERON:0001017!1.01e-18!73;UBERON:0005743!1.01e-18!73;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0004121!1.96e-18!102;UBERON:0000924!1.96e-18!102;UBERON:0006601!1.96e-18!102;UBERON:0000073!4.21e-18!75;UBERON:0001016!4.21e-18!75;UBERON:0002791!4.52e-17!29;UBERON:0003528!4.52e-17!29;UBERON:0001893!4.52e-17!29;UBERON:0000033!4.63e-17!63;UBERON:0003080!1.40e-15!40;UBERON:0003056!1.87e-15!49;UBERON:0002780!7.18e-15!39;UBERON:0001890!7.18e-15!39;UBERON:0006240!7.18e-15!39;UBERON:0000956!1.46e-11!21;UBERON:0001869!1.46e-11!21;UBERON:0000203!1.46e-11!21;UBERON:0002619!1.40e-09!17;UBERON:0002021!7.21e-09!10;UBERON:0000411!7.21e-09!10;UBERON:0001950!7.21e-09!10;UBERON:0007811!4.48e-08!86;UBERON:0000153!2.41e-07!94;UBERON:0002420!7.90e-07!8;UBERON:0007245!7.90e-07!8;UBERON:0010009!7.90e-07!8;UBERON:0010011!7.90e-07!8;UBERON:0000454!7.90e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!1.75e-20!52;UBERON:0005068!1.75e-20!52;UBERON:0006241!1.75e-20!52;UBERON:0007135!1.75e-20!52;UBERON:0002020!4.50e-20!34;UBERON:0000955!8.73e-20!50;UBERON:0006238!8.73e-20!50;UBERON:0002616!5.98e-19!49;UBERON:0001017!1.01e-18!73;UBERON:0005743!1.01e-18!73;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0004121!1.96e-18!102;UBERON:0000924!1.96e-18!102;UBERON:0006601!1.96e-18!102;UBERON:0000073!4.21e-18!75;UBERON:0001016!4.21e-18!75;UBERON:0002791!4.52e-17!29;UBERON:0003528!4.52e-17!29;UBERON:0001893!4.52e-17!29;UBERON:0000033!4.63e-17!63;UBERON:0003080!1.40e-15!40;UBERON:0003056!1.87e-15!49;UBERON:0002780!7.18e-15!39;UBERON:0001890!7.18e-15!39;UBERON:0006240!7.18e-15!39;UBERON:0000956!1.46e-11!21;UBERON:0001869!1.46e-11!21;UBERON:0000203!1.46e-11!21;UBERON:0002619!1.40e-09!17;UBERON:0002021!7.21e-09!10;UBERON:0000411!7.21e-09!10;UBERON:0001950!7.21e-09!10;UBERON:0007811!4.48e-08!86;UBERON:0000153!2.41e-07!94;UBERON:0002420!7.90e-07!8;UBERON:0007245!7.90e-07!8;UBERON:0010009!7.90e-07!8;UBERON:0010011!7.90e-07!8;UBERON:0000454!7.90e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-38,54;UBERON:0001049,1.74e-35,52;UBERON:0005068,1.74e-35,52;UBERON:0006241,1.74e-35,52;UBERON:0007135,1.74e-35,52;UBERON:0002020,3.41e-35,34;UBERON:0001017,8.97e-34,73;UBERON:0001016,1.63e-32,75;UBERON:0000955,3.47e-30,47;UBERON:0006238,3.47e-30,47;UBERON:0003528,1.26e-29,29;UBERON:0002791,1.26e-29,29;UBERON:0001893,1.26e-29,29;UBERON:0002616,1.07e-28,46;UBERON:0002346,1.32e-26,64;UBERON:0003075,1.32e-26,64;UBERON:0007284,1.32e-26,64;UBERON:0003080,2.24e-25,40;UBERON:0002780,4.29e-24,39;UBERON:0001890,4.29e-24,39;UBERON:0006240,4.29e-24,39;UBERON:0004121,7.52e-23,95;UBERON:0000924,7.52e-23,95;UBERON:0006601,7.52e-23,95;UBERON:0010371,7.01e-22,73;UBERON:0000956,1.89e-19,21;UBERON:0001869,1.89e-19,21;UBERON:0000203,1.89e-19,21;UBERON:0003056,4.78e-19,49;UBERON:0002619,1.30e-17,17;UBERON:0010314,6.01e-16,92;UBERON:0002021,4.56e-15,10;UBERON:0000411,4.56e-15,10;UBERON:0001950,4.56e-15,10;UBERON:0000025,2.25e-11,114;UBERON:0002420,2.61e-11,8;UBERON:0007245,2.61e-11,8;UBERON:0010009,2.61e-11,8;UBERON:0010011,2.61e-11,8;UBERON:0000454,2.61e-11,8;UBERON:0004111,1.43e-10,122;UBERON:0003076,3.05e-10,12;UBERON:0003057,3.05e-10,12;UBERON:0002240,9.14e-08,6;UBERON:0005174,9.14e-08,6;UBERON:0001137,9.14e-08,6;UBERON:0002950,2.96e-07,4;UBERON:0001891,2.96e-07,4;UBERON:0009616,2.96e-07,4;UBERON:0010286,2.96e-07,4;UBERON:0000369,5.53e-07,5;UBERON:0002435,5.53e-07,5;UBERON:0000204,5.53e-07,5;UBERON:0010082,5.53e-07,5 | |||
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| ||
|short_description=p1@Nxph1 | |short_description=p1@Nxph1 | ||
}} | }} |
Latest revision as of 21:34, 1 October 2015
Short description: | p1@Nxph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nxph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 136bp_to_ENSMUST00000060369_5end |
EntrezGene: | Nxph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.48e-25 | 23 |
neuroblast (sensu Vertebrata) | 8.48e-25 | 23 |
neuron | 2.73e-15 | 33 |
neuronal stem cell | 2.73e-15 | 33 |
neuroblast | 2.73e-15 | 33 |
electrically signaling cell | 2.73e-15 | 33 |
electrically responsive cell | 5.68e-12 | 39 |
electrically active cell | 5.68e-12 | 39 |
neural cell | 2.71e-10 | 43 |
ectodermal cell | 6.35e-10 | 44 |
neurectodermal cell | 6.35e-10 | 44 |